RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 LIPJQ5W064 366 aa12.61□□□□□ -0.39
PCDHA11-202ENST00000616325 SLC25A25Q6KCM7 469 aa12.61□□□□□ -0.39
PCDHA11-202ENST00000616325 RASGEF1AQ8N9B8 481 aa12.61□□□□□ -0.39
PCDHA11-202ENST00000616325 OR52H1Q8NGJ2 320 aa12.61□□□□□ -0.39
PCDHA11-202ENST00000616325 ADAMTS19Q8TE59 1207 aa12.61□□□□□ -0.39
PCDHA11-202ENST00000616325 ZNF480Q8WV37 535 aa12.61□□□□□ -0.39
PCDHA11-202ENST00000616325 TMEM19Q96HH6 336 aa12.61□□□□□ -0.39
PCDHA11-202ENST00000616325 ZNF304Q9HCX3 659 aa12.61□□□□□ -0.39
PCDHA11-202ENST00000616325 FANCFQ9NPI8 374 aa12.61□□□□□ -0.39
PCDHA11-202ENST00000616325 THSD1Q9NS62 852 aa12.61□□□□□ -0.39
PCDHA11-202ENST00000616325 HPF1Q9NWY4 346 aa12.61□□□□□ -0.39
PCDHA11-202ENST00000616325 SZT2Q5T011 3432 aa12.61□□□□□ -0.39
PCDHA11-202ENST00000616325 A0A1W2PQ45 241 aaPredicted RBP12.61□□□□□ -0.39
PCDHA11-202ENST00000616325 A0A1W2PQY0 241 aa12.61□□□□□ -0.39
PCDHA11-202ENST00000616325 ADAP00813 363 aa12.61□□□□□ -0.39
PCDHA11-202ENST00000616325 TFP02787 698 aa12.61□□□□□ -0.39
PCDHA11-202ENST00000616325 ELFN1P0C7U0 828 aa12.61□□□□□ -0.39
PCDHA11-202ENST00000616325 SELPP16109 830 aa12.61□□□□□ -0.39
PCDHA11-202ENST00000616325 PITPNBP48739 271 aa12.61□□□□□ -0.39
PCDHA11-202ENST00000616325 METAP1P53582 386 aa12.61□□□□□ -0.39
PCDHA11-202ENST00000616325 SNRPGP62308 76 aaKnown RBP12.61□□□□□ -0.39
PCDHA11-202ENST00000616325 SLC3A1Q07837 685 aa12.61□□□□□ -0.39
PCDHA11-202ENST00000616325 LGALS3BPQ08380 585 aa12.61□□□□□ -0.39
PCDHA11-202ENST00000616325 GNA13Q14344 377 aa12.61□□□□□ -0.39
PCDHA11-202ENST00000616325 PRSS53Q2L4Q9 553 aa12.61□□□□□ -0.39
PCDHA11-202ENST00000616325 HSD17B12Q53GQ0 312 aa12.61□□□□□ -0.39
PCDHA11-202ENST00000616325 QSOX2Q6ZRP7 698 aa12.61□□□□□ -0.39
PCDHA11-202ENST00000616325 OR8K3Q8NH51 312 aa12.61□□□□□ -0.39
PCDHA11-202ENST00000616325 SPRYD4Q8WW59 207 aaPredicted RBP12.61□□□□□ -0.39
PCDHA11-202ENST00000616325 F2RL3Q96RI0 385 aa12.61□□□□□ -0.39
PCDHA11-202ENST00000616325 C12orf57Q99622 126 aa12.61□□□□□ -0.39
PCDHA11-202ENST00000616325 GSDMCQ9BYG8 508 aa12.61□□□□□ -0.39
PCDHA11-202ENST00000616325 GHITMQ9H3K2 345 aa12.61□□□□□ -0.39
PCDHA11-202ENST00000616325 DLL4Q9NR61 685 aa12.61□□□□□ -0.39
PCDHA11-202ENST00000616325 HCFC1R1Q9NWW0 138 aa12.61□□□□□ -0.39
PCDHA11-202ENST00000616325 H2AFY2Q9P0M6 372 aaPredicted RBP12.61□□□□□ -0.39
PCDHA11-202ENST00000616325 MLXQ9UH92 298 aa12.61□□□□□ -0.39
PCDHA11-202ENST00000616325 CYB5R1Q9UHQ9 305 aa12.61□□□□□ -0.39
PCDHA11-202ENST00000616325 GMEB2Q9UKD1 530 aa12.61□□□□□ -0.39
PCDHA11-202ENST00000616325 PCDHGA9Q9Y5G4 932 aaKnown RBP12.61□□□□□ -0.39
PCDHA11-202ENST00000616325 SDK1Q7Z5N4 2213 aa12.61□□□□□ -0.39
PCDHA11-202ENST00000616325 FAM183AA6NL82 134 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 BET1O15155 118 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 ARPC5O15511 151 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 SRPRAP08240 638 aaKnown RBP12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 C8orf89P0DMQ9 161 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 ELAVL4P26378 380 aaKnown RBP12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 HOXD10P28358 340 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 GABRA5P31644 462 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 TMEM107Q6UX40 140 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 NLRC3Q7RTR2 1065 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 TMEM150AQ86TG1 271 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 HORMAD2Q8N7B1 307 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 BMPERQ8N8U9 685 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 OR10Z1Q8NGY1 313 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 RPLP0P6Q8NHW5 317 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 RNF32Q9H0A6 362 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 ZNF768Q9H5H4 540 aaKnown RBP12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 CXorf36Q9H7Y0 433 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 CHD7Q9P2D1 2997 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 SLC22A23A1A5C7 686 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 ANHXE9PGG2 379 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 CCL16O15467 120 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 SEC14L5O43304 696 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 SOCS5O75159 536 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 LPLP06858 475 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 CDH11P55287 796 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 TMEM115Q12893 351 aaPredicted RBP12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 MPEG1Q2M385 716 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 PLA1AQ53H76 456 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 HIST2H2AA3Q6FI13 130 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 GAREM2Q75VX8 874 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 C16orf78Q8WTQ4 265 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 SEC22CQ9BRL7 303 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 CUEDC1Q9NWM3 386 aaPredicted RBP12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 CNIH4Q9P003 139 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 MGAT4CQ9UBM8 478 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 GULP1Q9UBP9 304 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 KCNMB2Q9Y691 235 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 ALPK2Q86TB3 2170 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 ATG2BQ96BY7 2078 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 FXYD6-FXYD2A0A087WZ82 144 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 K7ESM1 405 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 KHNYNO15037 678 aaKnown RBP12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 PPM1DO15297 605 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 NR2F1P10589 423 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 SPTBP11277 2137 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 AHCYP23526 432 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 ERVK-25P63136 954 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 DGCR2P98153 550 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 ELOAQ14241 798 aaKnown RBP12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 ZNF697Q5TEC3 545 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 TCTN3Q6NUS6 607 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 PODNL1Q6PEZ8 512 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 GDPD4Q6W3E5 623 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 MEIOBQ8N635 442 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 OR4K5Q8NGD3 323 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 OR52N2Q8NGI0 321 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 OR51G2Q8NGK0 314 aa12.6□□□□□ -0.39
PCDHA11-202ENST00000616325 KLK6Q92876 244 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms