RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 SMG1Q96Q15 3661 aaKnown RBP7.43□□□□□ -1.22
PCDH9-205ENST00000614931 PIEZO2Q9H5I5 2752 aa7.42□□□□□ -1.22
PCDH9-205ENST00000614931 TNRC6AQ8NDV7 1962 aaKnown RBP7.42□□□□□ -1.22
PCDH9-205ENST00000614931 BOD1L1Q8NFC6 3051 aa7.42□□□□□ -1.22
PCDH9-205ENST00000614931 NPIPA5A0A0B4J1W7 369 aa7.42□□□□□ -1.22
PCDH9-205ENST00000614931 FRG2CA6NGY1 282 aa7.42□□□□□ -1.22
PCDH9-205ENST00000614931 NPIPA7E9PJI5 369 aa7.42□□□□□ -1.22
PCDH9-205ENST00000614931 PYCARD-AS1I3L0S3 204 aa7.42□□□□□ -1.22
PCDH9-205ENST00000614931 WISP1O95388 367 aa7.42□□□□□ -1.22
PCDH9-205ENST00000614931 H6PDO95479 791 aa7.42□□□□□ -1.22
PCDH9-205ENST00000614931 OPN1SWP03999 348 aa7.42□□□□□ -1.22
PCDH9-205ENST00000614931 CD63P08962 238 aa7.42□□□□□ -1.22
PCDH9-205ENST00000614931 NPIPA8P0DM63 369 aa7.42□□□□□ -1.22
PCDH9-205ENST00000614931 NR2F1P10589 423 aa7.42□□□□□ -1.22
PCDH9-205ENST00000614931 ITGAMP11215 1152 aa7.42□□□□□ -1.22
PCDH9-205ENST00000614931 GABRA3P34903 492 aa7.42□□□□□ -1.22
PCDH9-205ENST00000614931 TRHRP34981 398 aaPredicted RBP7.42□□□□□ -1.22
PCDH9-205ENST00000614931 MAGEA8P43361 318 aa7.42□□□□□ -1.22
PCDH9-205ENST00000614931 ST13P50502 369 aaKnown RBP7.42□□□□□ -1.22
PCDH9-205ENST00000614931 RNF4P78317 190 aa7.42□□□□□ -1.22
PCDH9-205ENST00000614931 POU6F2P78424 691 aaPredicted RBP7.42□□□□□ -1.22
PCDH9-205ENST00000614931 RBBP4Q09028 425 aa7.42□□□□□ -1.22
PCDH9-205ENST00000614931 TRAP1Q12931 704 aaKnown RBP7.42□□□□□ -1.22
PCDH9-205ENST00000614931 FLOT2Q14254 428 aa7.42□□□□□ -1.22
PCDH9-205ENST00000614931 ZNF630Q2M218 657 aaPredicted RBP7.42□□□□□ -1.22
PCDH9-205ENST00000614931 BTBD16Q32M84 506 aa7.42□□□□□ -1.22
PCDH9-205ENST00000614931 DCST2Q5T1A1 773 aa7.42□□□□□ -1.22
PCDH9-205ENST00000614931 C1orf146Q5VVC0 180 aa7.42□□□□□ -1.22
PCDH9-205ENST00000614931 PLAG1Q6DJT9 500 aa7.42□□□□□ -1.22
PCDH9-205ENST00000614931 GLYATQ6IB77 296 aa7.42□□□□□ -1.22
PCDH9-205ENST00000614931 DESI1Q6ICB0 168 aa7.42□□□□□ -1.22
PCDH9-205ENST00000614931 TCTN3Q6NUS6 607 aa7.42□□□□□ -1.22
PCDH9-205ENST00000614931 ERICH5Q6P6B1 374 aa7.42□□□□□ -1.22
PCDH9-205ENST00000614931 ZCCHC12Q6PEW1 402 aa7.42□□□□□ -1.22
PCDH9-205ENST00000614931 FIGNL1Q6PIW4 674 aa7.42□□□□□ -1.22
PCDH9-205ENST00000614931 NDUFAF7Q7L592 441 aa7.42□□□□□ -1.22
PCDH9-205ENST00000614931 COMTD1Q86VU5 262 aa7.42□□□□□ -1.22
PCDH9-205ENST00000614931 DHFR2Q86XF0 187 aa7.42□□□□□ -1.22
PCDH9-205ENST00000614931 SPPL2CQ8IUH8 684 aa7.42□□□□□ -1.22
PCDH9-205ENST00000614931 PRR22Q8IZ63 422 aa7.42□□□□□ -1.22
PCDH9-205ENST00000614931 COX18Q8N8Q8 333 aa7.42□□□□□ -1.22
PCDH9-205ENST00000614931 HIPK4Q8NE63 616 aa7.42□□□□□ -1.22
PCDH9-205ENST00000614931 C7orf57Q8NEG2 295 aa7.42□□□□□ -1.22
PCDH9-205ENST00000614931 BHLHE22Q8NFJ8 381 aaPredicted RBP7.42□□□□□ -1.22
PCDH9-205ENST00000614931 OR10Q1Q8NGQ4 319 aa7.42□□□□□ -1.22
PCDH9-205ENST00000614931 ELP5Q8TE02 316 aa7.42□□□□□ -1.22
PCDH9-205ENST00000614931 THAP3Q8WTV1 239 aaPredicted RBP7.42□□□□□ -1.22
PCDH9-205ENST00000614931 TAMM41Q96BW9 452 aa7.42□□□□□ -1.22
PCDH9-205ENST00000614931 RMND5BQ96G75 393 aaPredicted RBP7.42□□□□□ -1.22
PCDH9-205ENST00000614931 SDF2Q99470 211 aa7.42□□□□□ -1.22
PCDH9-205ENST00000614931 ZNF350Q9GZX5 532 aa7.42□□□□□ -1.22
PCDH9-205ENST00000614931 QRSL1Q9H0R6 528 aaKnown RBP7.42□□□□□ -1.22
PCDH9-205ENST00000614931 ZNF71Q9NQZ8 489 aaPredicted RBP7.42□□□□□ -1.22
PCDH9-205ENST00000614931 P4HTMQ9NXG6 502 aa7.42□□□□□ -1.22
PCDH9-205ENST00000614931 GIN1Q9NXP7 522 aa7.42□□□□□ -1.22
PCDH9-205ENST00000614931 FLRT3Q9NZU0 649 aa7.42□□□□□ -1.22
PCDH9-205ENST00000614931 ACTR3BQ9P1U1 418 aa7.42□□□□□ -1.22
PCDH9-205ENST00000614931 P2RX2Q9UBL9 471 aa7.42□□□□□ -1.22
PCDH9-205ENST00000614931 PRODH2Q9UF12 536 aa7.42□□□□□ -1.22
PCDH9-205ENST00000614931 ANAPC2Q9UJX6 822 aa7.42□□□□□ -1.22
PCDH9-205ENST00000614931 DSPPQ9NZW4 1301 aa7.42□□□□□ -1.22
PCDH9-205ENST00000614931 ZNF462Q96JM2 2506 aa7.42□□□□□ -1.22
PCDH9-205ENST00000614931 NCKAP5O14513 1909 aa7.41□□□□□ -1.22
PCDH9-205ENST00000614931 MPDZO75970 2070 aa7.41□□□□□ -1.22
PCDH9-205ENST00000614931 NSG1A0A0A6YYJ2 146 aa7.41□□□□□ -1.22
PCDH9-205ENST00000614931 TCRBV3S1A0A5B6 114 aa7.41□□□□□ -1.22
PCDH9-205ENST00000614931 OR6C76A6NM76 312 aa7.41□□□□□ -1.22
PCDH9-205ENST00000614931 MKRN2OSH3BPM6 223 aa7.41□□□□□ -1.22
PCDH9-205ENST00000614931 K7EM74 188 aa7.41□□□□□ -1.22
PCDH9-205ENST00000614931 PCDH17O14917 1159 aa7.41□□□□□ -1.22
PCDH9-205ENST00000614931 GSTA4O15217 222 aa7.41□□□□□ -1.22
PCDH9-205ENST00000614931 DYRK3O43781 588 aa7.41□□□□□ -1.22
PCDH9-205ENST00000614931 FCMRO60667 390 aa7.41□□□□□ -1.22
PCDH9-205ENST00000614931 ENTPD5O75356 428 aa7.41□□□□□ -1.22
PCDH9-205ENST00000614931 CIB2O75838 187 aa7.41□□□□□ -1.22
PCDH9-205ENST00000614931 KCNK2O95069 426 aa7.41□□□□□ -1.22
PCDH9-205ENST00000614931 PGM3O95394 542 aa7.41□□□□□ -1.22
PCDH9-205ENST00000614931 EPPINO95925 133 aa7.41□□□□□ -1.22
PCDH9-205ENST00000614931 HPP00738 406 aa7.41□□□□□ -1.22
PCDH9-205ENST00000614931 SERPINA1P01009 418 aa7.41□□□□□ -1.22
PCDH9-205ENST00000614931 C8BP07358 591 aa7.41□□□□□ -1.22
PCDH9-205ENST00000614931 CD247P20963 164 aa7.41□□□□□ -1.22
PCDH9-205ENST00000614931 KDELR2P33947 212 aa7.41□□□□□ -1.22
PCDH9-205ENST00000614931 CASRP41180 1078 aa7.41□□□□□ -1.22
PCDH9-205ENST00000614931 PPICP45877 212 aa7.41□□□□□ -1.22
PCDH9-205ENST00000614931 RNF144AP50876 292 aaPredicted RBP7.41□□□□□ -1.22
PCDH9-205ENST00000614931 CLCN2P51788 898 aa7.41□□□□□ -1.22
PCDH9-205ENST00000614931 NR0B1P51843 470 aaKnown RBP7.41□□□□□ -1.22
PCDH9-205ENST00000614931 ACTR3P61158 418 aa7.41□□□□□ -1.22
PCDH9-205ENST00000614931 MRPS22P82650 360 aaKnown RBP7.41□□□□□ -1.22
PCDH9-205ENST00000614931 TXNL4AP83876 142 aaKnown RBP7.41□□□□□ -1.22
PCDH9-205ENST00000614931 PLAURQ03405 335 aa7.41□□□□□ -1.22
PCDH9-205ENST00000614931 CHRNEQ04844 493 aa7.41□□□□□ -1.22
PCDH9-205ENST00000614931 VEZF1Q14119 521 aa7.41□□□□□ -1.22
PCDH9-205ENST00000614931 ARHGAP11BQ3KRB8 267 aa7.41□□□□□ -1.22
PCDH9-205ENST00000614931 GLIPR1L2Q4G1C9 344 aa7.41□□□□□ -1.22
PCDH9-205ENST00000614931 GPAT3Q53EU6 434 aa7.41□□□□□ -1.22
PCDH9-205ENST00000614931 LRRC23Q53EV4 343 aaPredicted RBP7.41□□□□□ -1.22
PCDH9-205ENST00000614931 FCRLBQ6BAA4 426 aa7.41□□□□□ -1.22
PCDH9-205ENST00000614931 TYW3Q6IPR3 259 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms