RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 PLA2G7Q13093 441 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 SCARB2Q14108 478 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 SSX1Q16384 188 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 OIT3Q8WWZ8 545 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 CDK15Q96Q40 435 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 PRRT1Q99946 306 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 TM6SF2Q9BZW4 377 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 GLOD4Q9HC38 313 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 PRDM9Q9NQV7 894 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 SLC12A8A0AV02 714 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 M0R129 80 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 SORBS2O94875 1100 aaKnown RBP4.71□□□□□ -1.66
VPS13D-213ENST00000613099 TYMPP19971 482 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 PTPN3P26045 913 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 CACNB3P54284 484 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 MEF2AQ02078 507 aaPredicted RBP4.71□□□□□ -1.66
VPS13D-213ENST00000613099 ITPK1Q13572 414 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 GPR176Q14439 515 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 TCEA2Q15560 299 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 GLT8D1Q68CQ7 371 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 REEP3Q6NUK4 255 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 CCDC190Q86UF4 302 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 HS6ST3Q8IZP7 471 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 ZNF709Q8N972 641 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 KAZALD1Q96I82 304 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 B3GNT4Q9C0J1 378 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 CNTN3Q9P232 1028 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 Q9Y3F1 56 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 CBX7O95931 251 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 GLUD1P00367 558 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 OR8U9P0C7N5 309 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 FBXW4P57775 412 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 SLC26A5P58743 744 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 PPIGQ13427 754 aaKnown RBP eCLIP4.7□□□□□ -1.667e-7■■■□□ 15.7
VPS13D-213ENST00000613099 NKAIN1Q4KMZ8 207 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 ACOT7LQ6ZUV0 252 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 LDB1Q86U70 411 aaPredicted RBP4.7□□□□□ -1.66
VPS13D-213ENST00000613099 CHTF18Q8WVB6 975 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 UCN3Q969E3 161 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 SLAMF9Q96A28 289 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 SHARPINQ9H0F6 387 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 ARV1Q9H2C2 271 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 ACKR4Q9NPB9 350 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 SEC16AO15027 2179 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 APC2O95996 2303 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 URADA6NGE7 173 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 E5RJQ4 531 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 IFNA5P01569 189 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 PGAM2P15259 253 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 EPORP19235 508 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 FPR3P25089 353 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 GTF2BQ00403 316 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 NRG1Q02297 640 aaPredicted RBP4.7□□□□□ -1.66
VPS13D-213ENST00000613099 ZNF584Q8IVC4 421 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 STT3BQ8TCJ2 826 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 GLYATL2Q8WU03 294 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 SORT1Q99523 831 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 GPR22Q99680 433 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 ADAM19Q9H013 955 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 DUSP21Q9H596 190 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 SIX2Q9NPC8 291 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 IGSF5Q9NSI5 407 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 OR6C6A6NF89 314 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 STAG3L1P0CL83 205 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 IFITM2Q01629 132 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 CRB2Q5IJ48 1285 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 PRPF38BQ5VTL8 546 aaKnown RBP4.7□□□□□ -1.66
VPS13D-213ENST00000613099 HBMQ6B0K9 141 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 MASTLQ96GX5 879 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 SLIRPQ9GZT3 109 aaKnown RBP4.7□□□□□ -1.66
VPS13D-213ENST00000613099 SLAMF7Q9NQ25 335 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 EQTNQ9NQ60 294 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 MED9Q9NWA0 146 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 ABRACLQ9P1F3 81 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 PFKMP08237 780 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 RAB6AP20340 208 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 CBLP22681 906 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 RBMS2Q15434 407 aaKnown RBP4.7□□□□□ -1.66
VPS13D-213ENST00000613099 ZNF630Q2M218 657 aaPredicted RBP4.7□□□□□ -1.66
VPS13D-213ENST00000613099 C9orf62Q8N4C0 152 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 DTWD1Q8N5C7 304 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 IQCF1Q8N6M8 205 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 STYXQ8WUJ0 223 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 SMIM12Q96EX1 92 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 FAM83CQ9BQN1 747 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 INPP5EQ9NRR6 644 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 PCDHGA9Q9Y5G4 932 aaKnown RBP4.7□□□□□ -1.66
VPS13D-213ENST00000613099 ZNF318Q5VUA4 2279 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 LINC00587B1AMM8 73 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 OR10H2O60403 315 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 AOC2O75106 756 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 PLK5Q496M5 336 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 IER5Q5VY09 327 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 OR13C3Q8NGS6 347 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 HUS1BQ8NHY5 278 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 RSC1A1Q92681 617 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 OR7D2Q96RA2 312 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 SPACA6W5XKT8 324 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 A8MXE2 369 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 SLC7A4O43246 635 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms