RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 SLITRK5O94991 958 aa13.16□□□□□ -0.3
PCDHGA3-202ENST00000612467 ACP2P11117 423 aa13.16□□□□□ -0.3
PCDHGA3-202ENST00000612467 DDX5P17844 614 aaKnown RBP13.16□□□□□ -0.3
PCDHGA3-202ENST00000612467 TNFSF8P32971 234 aa13.16□□□□□ -0.3
PCDHGA3-202ENST00000612467 TNFRSF4P43489 277 aa13.16□□□□□ -0.3
PCDHGA3-202ENST00000612467 SMIM11AP58511 58 aa13.16□□□□□ -0.3
PCDHGA3-202ENST00000612467 RPS25P62851 125 aaKnown RBP13.16□□□□□ -0.3
PCDHGA3-202ENST00000612467 RHAGQ02094 409 aa13.16□□□□□ -0.3
PCDHGA3-202ENST00000612467 C1orf61Q13536 156 aa13.16□□□□□ -0.3
PCDHGA3-202ENST00000612467 NFATC4Q14934 902 aa13.16□□□□□ -0.3
PCDHGA3-202ENST00000612467 ALG11Q2TAA5 492 aa13.16□□□□□ -0.3
PCDHGA3-202ENST00000612467 MFSD12Q6NUT3 480 aa13.16□□□□□ -0.3
PCDHGA3-202ENST00000612467 FIGNL1Q6PIW4 674 aa13.16□□□□□ -0.3
PCDHGA3-202ENST00000612467 PLEKHM3Q6ZWE6 761 aa13.16□□□□□ -0.3
PCDHGA3-202ENST00000612467 CELF2-AS1Q8N7Q2 184 aa13.16□□□□□ -0.3
PCDHGA3-202ENST00000612467 RPLP0P6Q8NHW5 317 aa13.16□□□□□ -0.3
PCDHGA3-202ENST00000612467 SFXN5Q8TD22 340 aa13.16□□□□□ -0.3
PCDHGA3-202ENST00000612467 FAM3CQ92520 227 aa13.16□□□□□ -0.3
PCDHGA3-202ENST00000612467 MCHR1Q99705 422 aa13.16□□□□□ -0.3
PCDHGA3-202ENST00000612467 ACTRT3Q9BYD9 372 aa13.16□□□□□ -0.3
PCDHGA3-202ENST00000612467 ENKD1Q9H0I2 346 aa13.16□□□□□ -0.3
PCDHGA3-202ENST00000612467 OR6C2Q9NZP2 312 aa13.16□□□□□ -0.3
PCDHGA3-202ENST00000612467 CCDC59Q9P031 241 aaKnown RBP13.16□□□□□ -0.3
PCDHGA3-202ENST00000612467 PCDHGB6Q9Y5F9 930 aa13.16□□□□□ -0.3
PCDHGA3-202ENST00000612467 DVL2O14641 736 aa13.15□□□□□ -0.3
PCDHGA3-202ENST00000612467 CDRT1O95170 752 aa13.15□□□□□ -0.3
PCDHGA3-202ENST00000612467 OMPP47874 163 aa13.15□□□□□ -0.3
PCDHGA3-202ENST00000612467 TNFRSF17Q02223 184 aa13.15□□□□□ -0.3
PCDHGA3-202ENST00000612467 NCF4Q15080 339 aa13.15□□□□□ -0.3
PCDHGA3-202ENST00000612467 PUS10Q3MIT2 529 aaKnown RBP13.15□□□□□ -0.3
PCDHGA3-202ENST00000612467 DESI1Q6ICB0 168 aa13.15□□□□□ -0.3
PCDHGA3-202ENST00000612467 TYW3Q6IPR3 259 aaKnown RBP13.15□□□□□ -0.3
PCDHGA3-202ENST00000612467 BHLHB9Q6PI77 547 aa13.15□□□□□ -0.3
PCDHGA3-202ENST00000612467 ZNF836Q6ZNA1 936 aa13.15□□□□□ -0.3
PCDHGA3-202ENST00000612467 GDF7Q7Z4P5 450 aa13.15□□□□□ -0.3
PCDHGA3-202ENST00000612467 LRRC25Q8N386 305 aaPredicted RBP13.15□□□□□ -0.3
PCDHGA3-202ENST00000612467 FAM26EQ8N5C1 309 aa13.15□□□□□ -0.3
PCDHGA3-202ENST00000612467 NLGN4YQ8NFZ3 816 aaPredicted RBP13.15□□□□□ -0.3
PCDHGA3-202ENST00000612467 TEX47Q8TBZ9 253 aa13.15□□□□□ -0.3
PCDHGA3-202ENST00000612467 SLC35B4Q969S0 331 aa13.15□□□□□ -0.3
PCDHGA3-202ENST00000612467 PPP1R14BQ96C90 147 aa13.15□□□□□ -0.3
PCDHGA3-202ENST00000612467 SCARF2Q96GP6 870 aaPredicted RBP13.15□□□□□ -0.3
PCDHGA3-202ENST00000612467 WDR92Q96MX6 357 aa13.15□□□□□ -0.3
PCDHGA3-202ENST00000612467 TRNT1Q96Q11 434 aaKnown RBP13.15□□□□□ -0.3
PCDHGA3-202ENST00000612467 ARHGDIGQ99819 225 aa13.15□□□□□ -0.3
PCDHGA3-202ENST00000612467 SLX1AQ9BQ83 275 aa13.15□□□□□ -0.3
PCDHGA3-202ENST00000612467 MND1Q9BWT6 205 aa13.15□□□□□ -0.3
PCDHGA3-202ENST00000612467 C1QTNF7Q9BXJ2 289 aa13.15□□□□□ -0.3
PCDHGA3-202ENST00000612467 SLC28A3Q9HAS3 691 aa13.15□□□□□ -0.3
PCDHGA3-202ENST00000612467 ZSCAN32Q9NX65 697 aa13.15□□□□□ -0.3
PCDHGA3-202ENST00000612467 TESQ9UGI8 421 aaKnown RBP13.15□□□□□ -0.3
PCDHGA3-202ENST00000612467 MUTYHQ9UIF7 546 aa13.15□□□□□ -0.3
PCDHGA3-202ENST00000612467 SLC7A7Q9UM01 511 aa13.15□□□□□ -0.3
PCDHGA3-202ENST00000612467 AQP9O43315 295 aa13.15□□□□□ -0.3
PCDHGA3-202ENST00000612467 FGF17O60258 216 aa13.15□□□□□ -0.3
PCDHGA3-202ENST00000612467 GUCY1B2O75343 617 aa13.15□□□□□ -0.3
PCDHGA3-202ENST00000612467 UBXN7O94888 489 aa13.15□□□□□ -0.3
PCDHGA3-202ENST00000612467 SLC35G6P0C7Q6 338 aa13.15□□□□□ -0.3
PCDHGA3-202ENST00000612467 ACADMP11310 421 aa13.15□□□□□ -0.3
PCDHGA3-202ENST00000612467 TPMTP51580 245 aa13.15□□□□□ -0.3
PCDHGA3-202ENST00000612467 EFNB1P98172 346 aa13.15□□□□□ -0.3
PCDHGA3-202ENST00000612467 CSTF1Q05048 431 aaKnown RBP13.15□□□□□ -0.3
PCDHGA3-202ENST00000612467 OCLNQ16625 522 aa13.15□□□□□ -0.3
PCDHGA3-202ENST00000612467 HSDL2Q6YN16 418 aa13.15□□□□□ -0.3
PCDHGA3-202ENST00000612467 WDR88Q6ZMY6 472 aa13.15□□□□□ -0.3
PCDHGA3-202ENST00000612467 ZAR1Q86SH2 424 aa13.15□□□□□ -0.3
PCDHGA3-202ENST00000612467 GAL3ST3Q96A11 431 aa13.15□□□□□ -0.3
PCDHGA3-202ENST00000612467 SPATA5L1Q9BVQ7 753 aa13.15□□□□□ -0.3
PCDHGA3-202ENST00000612467 MED20Q9H944 212 aa13.15□□□□□ -0.3
PCDHGA3-202ENST00000612467 KCNE5Q9UJ90 142 aa13.15□□□□□ -0.3
PCDHGA3-202ENST00000612467 CACNA1IQ9P0X4 2223 aa13.14□□□□□ -0.31
PCDHGA3-202ENST00000612467 CT62P0C5K7 136 aa13.14□□□□□ -0.31
PCDHGA3-202ENST00000612467 TYRP1P17643 537 aa13.14□□□□□ -0.31
PCDHGA3-202ENST00000612467 NKX2-5P52952 324 aaPredicted RBP13.14□□□□□ -0.31
PCDHGA3-202ENST00000612467 SHC2P98077 582 aa13.14□□□□□ -0.31
PCDHGA3-202ENST00000612467 RGS1Q08116 209 aa13.14□□□□□ -0.31
PCDHGA3-202ENST00000612467 FAM214AQ32MH5 1076 aa13.14□□□□□ -0.31
PCDHGA3-202ENST00000612467 FCRLBQ6BAA4 426 aa13.14□□□□□ -0.31
PCDHGA3-202ENST00000612467 SLC27A4Q6P1M0 643 aa13.14□□□□□ -0.31
PCDHGA3-202ENST00000612467 FIGLAQ6QHK4 219 aa13.14□□□□□ -0.31
PCDHGA3-202ENST00000612467 DGAT2L6Q6ZPD8 337 aa13.14□□□□□ -0.31
PCDHGA3-202ENST00000612467 LINC00299Q6ZSB3 139 aa13.14□□□□□ -0.31
PCDHGA3-202ENST00000612467 GDPD3Q7L5L3 318 aa13.14□□□□□ -0.31
PCDHGA3-202ENST00000612467 RRM2BQ7LG56 351 aa13.14□□□□□ -0.31
PCDHGA3-202ENST00000612467 ANKK1Q8NFD2 765 aa13.14□□□□□ -0.31
PCDHGA3-202ENST00000612467 OR13H1Q8NG92 308 aa13.14□□□□□ -0.31
PCDHGA3-202ENST00000612467 SMAP2Q8WU79 429 aaPredicted RBP13.14□□□□□ -0.31
PCDHGA3-202ENST00000612467 HMGB4Q8WW32 186 aa13.14□□□□□ -0.31
PCDHGA3-202ENST00000612467 NACC2Q96BF6 587 aa13.14□□□□□ -0.31
PCDHGA3-202ENST00000612467 SARGQ9BW04 601 aa13.14□□□□□ -0.31
PCDHGA3-202ENST00000612467 S1PR5Q9H228 398 aa13.14□□□□□ -0.31
PCDHGA3-202ENST00000612467 SMURF1Q9HCE7 757 aa13.14□□□□□ -0.31
PCDHGA3-202ENST00000612467 ATP13A2Q9NQ11 1180 aa13.14□□□□□ -0.31
PCDHGA3-202ENST00000612467 ACTR10Q9NZ32 417 aa13.14□□□□□ -0.31
PCDHGA3-202ENST00000612467 WDR45Q9Y484 360 aa13.14□□□□□ -0.31
PCDHGA3-202ENST00000612467 PIAS3Q9Y6X2 628 aa13.14□□□□□ -0.31
PCDHGA3-202ENST00000612467 H0YGG7 62 aa13.14□□□□□ -0.31
PCDHGA3-202ENST00000612467 SOCS6O14544 535 aa13.14□□□□□ -0.31
PCDHGA3-202ENST00000612467 RAB36O95755 333 aa13.14□□□□□ -0.31
PCDHGA3-202ENST00000612467 PSMA1P25786 263 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 142.6 ms