RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 GALNTL6Q49A17 601 aa16.56■□□□□ 0.24
VCX3A-203ENST00000612369 VPS26BQ4G0F5 336 aa16.56■□□□□ 0.24
VCX3A-203ENST00000612369 AAGABQ6PD74 315 aa16.56■□□□□ 0.24
VCX3A-203ENST00000612369 ZCCHC23Q6ZST2 131 aa16.56■□□□□ 0.24
VCX3A-203ENST00000612369 ZNF551Q7Z340 670 aaPredicted RBP16.56■□□□□ 0.24
VCX3A-203ENST00000612369 WDR53Q7Z5U6 358 aaPredicted RBP16.56■□□□□ 0.24
VCX3A-203ENST00000612369 TNIP2Q8NFZ5 429 aa16.56■□□□□ 0.24
VCX3A-203ENST00000612369 OR6Y1Q8NGX8 325 aa16.56■□□□□ 0.24
VCX3A-203ENST00000612369 LRRC46Q96FV0 321 aa16.56■□□□□ 0.24
VCX3A-203ENST00000612369 TAS2R10Q9NYW0 307 aa16.56■□□□□ 0.24
VCX3A-203ENST00000612369 SH3BP4Q9P0V3 963 aa16.56■□□□□ 0.24
VCX3A-203ENST00000612369 NTMQ9P121 344 aa16.56■□□□□ 0.24
VCX3A-203ENST00000612369 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.56■□□□□ 0.24
VCX3A-203ENST00000612369 BAIAP2L1Q9UHR4 511 aa16.56■□□□□ 0.24
VCX3A-203ENST00000612369 V9GYY5 206 aaPredicted RBP16.56■□□□□ 0.24
VCX3A-203ENST00000612369 TACC2O95359 2948 aa16.56■□□□□ 0.24
VCX3A-203ENST00000612369 CSMD1Q96PZ7 3565 aa16.56■□□□□ 0.24
VCX3A-203ENST00000612369 PDZD2O15018 2839 aa16.55■□□□□ 0.24
VCX3A-203ENST00000612369 MBD3L4A6NDZ8 208 aaPredicted RBP16.55■□□□□ 0.24
VCX3A-203ENST00000612369 MBD3L3A6NE82 208 aaPredicted RBP16.55■□□□□ 0.24
VCX3A-203ENST00000612369 MBD3L5A6NJ08 208 aaPredicted RBP16.55■□□□□ 0.24
VCX3A-203ENST00000612369 CTIFO43310 598 aaKnown RBP16.55■□□□□ 0.24
VCX3A-203ENST00000612369 AKAP10O43572 662 aa16.55■□□□□ 0.24
VCX3A-203ENST00000612369 FADS1O60427 444 aa16.55■□□□□ 0.24
VCX3A-203ENST00000612369 TUBBP07437 444 aa16.55■□□□□ 0.24
VCX3A-203ENST00000612369 BCKDHAP12694 445 aa16.55■□□□□ 0.24
VCX3A-203ENST00000612369 CREB1P16220 341 aa16.55■□□□□ 0.24
VCX3A-203ENST00000612369 CHMP24386 653 aa16.55■□□□□ 0.24
VCX3A-203ENST00000612369 ETV4P43268 484 aa16.55■□□□□ 0.24
VCX3A-203ENST00000612369 GFRA1P56159 465 aa16.55■□□□□ 0.24
VCX3A-203ENST00000612369 HSPB3Q12988 150 aa16.55■□□□□ 0.24
VCX3A-203ENST00000612369 ATP6AP1LQ52LC2 224 aa16.55■□□□□ 0.24
VCX3A-203ENST00000612369 ZNF385BQ569K4 471 aa16.55■□□□□ 0.24
VCX3A-203ENST00000612369 XKR7Q5GH72 579 aa16.55■□□□□ 0.24
VCX3A-203ENST00000612369 DCST1Q5T197 706 aa16.55■□□□□ 0.24
VCX3A-203ENST00000612369 TRIM42Q8IWZ5 723 aa16.55■□□□□ 0.24
VCX3A-203ENST00000612369 MBD3L2Q8NHZ7 208 aaPredicted RBP16.55■□□□□ 0.24
VCX3A-203ENST00000612369 HOXB13Q92826 284 aaPredicted RBP16.55■□□□□ 0.24
VCX3A-203ENST00000612369 TRIB1Q96RU8 372 aa16.55■□□□□ 0.24
VCX3A-203ENST00000612369 SSU72Q9NP77 194 aaKnown RBP16.55■□□□□ 0.24
VCX3A-203ENST00000612369 FAM120CQ9NX05 1096 aaKnown RBP16.55■□□□□ 0.24
VCX3A-203ENST00000612369 PPP4R1LQ9P1A2 415 aa16.55■□□□□ 0.24
VCX3A-203ENST00000612369 FBXL2Q9UKC9 423 aa16.55■□□□□ 0.24
VCX3A-203ENST00000612369 RGS16O15492 202 aaPredicted RBP16.54■□□□□ 0.24
VCX3A-203ENST00000612369 LYPLA1O75608 230 aaPredicted RBP16.54■□□□□ 0.24
VCX3A-203ENST00000612369 KCNH1O95259 989 aa16.54■□□□□ 0.24
VCX3A-203ENST00000612369 DPP4P27487 766 aa16.54■□□□□ 0.24
VCX3A-203ENST00000612369 HPCAL1P37235 193 aa16.54■□□□□ 0.24
VCX3A-203ENST00000612369 DSCR4P56555 118 aaPredicted RBP16.54■□□□□ 0.24
VCX3A-203ENST00000612369 MLC1Q15049 377 aa16.54■□□□□ 0.24
VCX3A-203ENST00000612369 CES4AQ5XG92 561 aa16.54■□□□□ 0.24
VCX3A-203ENST00000612369 ANKRD26P1Q6NSI1 321 aa16.54■□□□□ 0.24
VCX3A-203ENST00000612369 ZCCHC12Q6PEW1 402 aa16.54■□□□□ 0.24
VCX3A-203ENST00000612369 NUDCD3Q8IVD9 361 aa16.54■□□□□ 0.24
VCX3A-203ENST00000612369 NATD1Q8N6N6 113 aa16.54■□□□□ 0.24
VCX3A-203ENST00000612369 CDRT4Q8N9R6 151 aa16.54■□□□□ 0.24
VCX3A-203ENST00000612369 OR4K17Q8NGC6 315 aa16.54■□□□□ 0.24
VCX3A-203ENST00000612369 CIDECQ96AQ7 238 aaPredicted RBP16.54■□□□□ 0.24
VCX3A-203ENST00000612369 UCN2Q96RP3 112 aa16.54■□□□□ 0.24
VCX3A-203ENST00000612369 HHATLQ9HCP6 504 aa16.54■□□□□ 0.24
VCX3A-203ENST00000612369 ATP6V1HQ9UI12 483 aa16.54■□□□□ 0.24
VCX3A-203ENST00000612369 ZDHHC2Q9UIJ5 367 aa16.54■□□□□ 0.24
VCX3A-203ENST00000612369 FOXD3Q9UJU5 478 aaPredicted RBP16.54■□□□□ 0.24
VCX3A-203ENST00000612369 DKKL1Q9UK85 242 aa16.54■□□□□ 0.24
VCX3A-203ENST00000612369 RAB21Q9UL25 225 aa16.54■□□□□ 0.24
VCX3A-203ENST00000612369 SYT5O00445 386 aa16.53■□□□□ 0.24
VCX3A-203ENST00000612369 PEX11AO75192 247 aa16.53■□□□□ 0.24
VCX3A-203ENST00000612369 NKX2-2O95096 273 aa16.53■□□□□ 0.24
VCX3A-203ENST00000612369 IL18BPO95998 194 aa16.53■□□□□ 0.24
VCX3A-203ENST00000612369 ARRB2P32121 409 aa16.53■□□□□ 0.24
VCX3A-203ENST00000612369 GABRA3P34903 492 aa16.53■□□□□ 0.24
VCX3A-203ENST00000612369 MAP3K8P41279 467 aa16.53■□□□□ 0.24
VCX3A-203ENST00000612369 ASCL1P50553 236 aa16.53■□□□□ 0.24
VCX3A-203ENST00000612369 ZNF844Q08AG5 666 aa16.53■□□□□ 0.24
VCX3A-203ENST00000612369 GANABQ14697 944 aaKnown RBP16.53■□□□□ 0.24
VCX3A-203ENST00000612369 BCL2A1Q16548 175 aa16.53■□□□□ 0.24
VCX3A-203ENST00000612369 FBXL19-AS1Q494R0 122 aa16.53■□□□□ 0.24
VCX3A-203ENST00000612369 OR5M10Q6IEU7 315 aa16.53■□□□□ 0.24
VCX3A-203ENST00000612369 CROCCP2Q86T23 111 aa16.53■□□□□ 0.24
VCX3A-203ENST00000612369 FADS6Q8N9I5 356 aa16.53■□□□□ 0.24
VCX3A-203ENST00000612369 NAXEQ8NCW5 288 aa16.53■□□□□ 0.24
VCX3A-203ENST00000612369 NUP43Q8NFH3 380 aa16.53■□□□□ 0.24
VCX3A-203ENST00000612369 CLHC1Q8NHS4 586 aa16.53■□□□□ 0.24
VCX3A-203ENST00000612369 AGR3Q8TD06 166 aa16.53■□□□□ 0.24
VCX3A-203ENST00000612369 SFXN2Q96NB2 322 aa16.53■□□□□ 0.24
VCX3A-203ENST00000612369 ZFP3Q96NJ6 502 aa16.53■□□□□ 0.24
VCX3A-203ENST00000612369 ZIM3Q96PE6 472 aa16.53■□□□□ 0.24
VCX3A-203ENST00000612369 ZNF559Q9BR84 538 aa16.53■□□□□ 0.24
VCX3A-203ENST00000612369 PTGES2Q9H7Z7 377 aa16.53■□□□□ 0.24
VCX3A-203ENST00000612369 KDM4EB2RXH2 506 aaPredicted RBP16.52■□□□□ 0.24
VCX3A-203ENST00000612369 H0Y3Z8 333 aa16.52■□□□□ 0.24
VCX3A-203ENST00000612369 LINC01387J3KSC0 135 aa16.52■□□□□ 0.24
VCX3A-203ENST00000612369 SCAMP2O15127 329 aaKnown RBP16.52■□□□□ 0.24
VCX3A-203ENST00000612369 BIRC5O15392 142 aa16.52■□□□□ 0.24
VCX3A-203ENST00000612369 EMC8O43402 210 aa16.52■□□□□ 0.24
VCX3A-203ENST00000612369 SCO2O43819 266 aa16.52■□□□□ 0.24
VCX3A-203ENST00000612369 ZIC3O60481 467 aa16.52■□□□□ 0.24
VCX3A-203ENST00000612369 SNUPNO95149 360 aaKnown RBP16.52■□□□□ 0.24
VCX3A-203ENST00000612369 BMP5P22003 454 aa16.52■□□□□ 0.24
VCX3A-203ENST00000612369 CTSSP25774 331 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms