RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 PRKRAO75569 313 aaKnown RBP8.2□□□□□ -1.1
SMAD4-217ENST00000611848 OR6B1O95007 311 aa8.2□□□□□ -1.1
SMAD4-217ENST00000611848 SNAP29O95721 258 aa8.2□□□□□ -1.1
SMAD4-217ENST00000611848 SERPINA1P01009 418 aa8.2□□□□□ -1.1
SMAD4-217ENST00000611848 ABCB1P08183 1280 aaPredicted RBP8.2□□□□□ -1.1
SMAD4-217ENST00000611848 CELA2AP08217 269 aa8.2□□□□□ -1.1
SMAD4-217ENST00000611848 SLC35E2P0CK97 266 aa8.2□□□□□ -1.1
SMAD4-217ENST00000611848 ITGAMP11215 1152 aa8.2□□□□□ -1.1
SMAD4-217ENST00000611848 ATP6V1B1P15313 513 aa8.2□□□□□ -1.1
SMAD4-217ENST00000611848 TNNI3P19429 210 aa8.2□□□□□ -1.1
SMAD4-217ENST00000611848 GSTT1P30711 240 aa8.2□□□□□ -1.1
SMAD4-217ENST00000611848 GALNSP34059 522 aa8.2□□□□□ -1.1
SMAD4-217ENST00000611848 ID2Q02363 134 aa8.2□□□□□ -1.1
SMAD4-217ENST00000611848 ZNF763Q0D2J5 394 aa8.2□□□□□ -1.1
SMAD4-217ENST00000611848 RAPSNQ13702 412 aa8.2□□□□□ -1.1
SMAD4-217ENST00000611848 CPTPQ5TA50 214 aa8.2□□□□□ -1.1
SMAD4-217ENST00000611848 ANXA8L1Q5VT79 327 aa8.2□□□□□ -1.1
SMAD4-217ENST00000611848 H3F3CQ6NXT2 135 aa8.2□□□□□ -1.1
SMAD4-217ENST00000611848 SLC48A1Q6P1K1 146 aa8.2□□□□□ -1.1
SMAD4-217ENST00000611848 ERICH5Q6P6B1 374 aa8.2□□□□□ -1.1
SMAD4-217ENST00000611848 TTC33Q6PID6 262 aaPredicted RBP8.2□□□□□ -1.1
SMAD4-217ENST00000611848 IGFL3Q6UXB1 125 aa8.2□□□□□ -1.1
SMAD4-217ENST00000611848 ASB18Q6ZVZ8 466 aa8.2□□□□□ -1.1
SMAD4-217ENST00000611848 PTOV1Q86YD1 416 aa8.2□□□□□ -1.1
SMAD4-217ENST00000611848 ZZZ3Q8IYH5 903 aa8.2□□□□□ -1.1
SMAD4-217ENST00000611848 MORN4Q8NDC4 146 aa8.2□□□□□ -1.1
SMAD4-217ENST00000611848 NFAM1Q8NET5 270 aaPredicted RBP8.2□□□□□ -1.1
SMAD4-217ENST00000611848 OR4K14Q8NGD5 310 aa8.2□□□□□ -1.1
SMAD4-217ENST00000611848 ZFP28Q8NHY6 868 aa8.2□□□□□ -1.1
SMAD4-217ENST00000611848 ELP5Q8TE02 316 aa8.2□□□□□ -1.1
SMAD4-217ENST00000611848 ZFAND2BQ8WV99 257 aa8.2□□□□□ -1.1
SMAD4-217ENST00000611848 PSMF1Q92530 271 aa8.2□□□□□ -1.1
SMAD4-217ENST00000611848 VMP1Q96GC9 406 aa8.2□□□□□ -1.1
SMAD4-217ENST00000611848 YTHDF1Q9BYJ9 559 aaKnown RBP8.2□□□□□ -1.1
SMAD4-217ENST00000611848 GRIP2Q9C0E4 1043 aa8.2□□□□□ -1.1
SMAD4-217ENST00000611848 EPS8L2Q9H6S3 715 aa8.2□□□□□ -1.1
SMAD4-217ENST00000611848 ZNF71Q9NQZ8 489 aaPredicted RBP8.2□□□□□ -1.1
SMAD4-217ENST00000611848 TEKT2Q9UIF3 430 aa8.2□□□□□ -1.1
SMAD4-217ENST00000611848 CES1P1Q9UKY3 287 aa8.2□□□□□ -1.1
SMAD4-217ENST00000611848 EXO1Q9UQ84 846 aaKnown RBP8.2□□□□□ -1.1
SMAD4-217ENST00000611848 COMMD3-BMI1R4GMX3 469 aa8.2□□□□□ -1.1
SMAD4-217ENST00000611848 A0A087WXM4 84 aa8.19□□□□□ -1.1
SMAD4-217ENST00000611848 WASHC1A8K0Z3 465 aa8.19□□□□□ -1.1
SMAD4-217ENST00000611848 C17orf105B2RV13 164 aa8.19□□□□□ -1.1
SMAD4-217ENST00000611848 G3V2T6 193 aa8.19□□□□□ -1.1
SMAD4-217ENST00000611848 K7EM74 188 aa8.19□□□□□ -1.1
SMAD4-217ENST00000611848 RNASET2O00584 256 aaKnown RBP8.19□□□□□ -1.1
SMAD4-217ENST00000611848 CDK2AP1O14519 115 aa8.19□□□□□ -1.1
SMAD4-217ENST00000611848 OR10H2O60403 315 aa8.19□□□□□ -1.1
SMAD4-217ENST00000611848 CST1P01037 141 aa8.19□□□□□ -1.1
SMAD4-217ENST00000611848 C1QCP02747 245 aa8.19□□□□□ -1.1
SMAD4-217ENST00000611848 SEMG1P04279 462 aa8.19□□□□□ -1.1
SMAD4-217ENST00000611848 IL3P08700 152 aa8.19□□□□□ -1.1
SMAD4-217ENST00000611848 PPIBP23284 216 aaKnown RBP8.19□□□□□ -1.1
SMAD4-217ENST00000611848 HPCAL1P37235 193 aa8.19□□□□□ -1.1
SMAD4-217ENST00000611848 ALDH9A1P49189 494 aa8.19□□□□□ -1.1
SMAD4-217ENST00000611848 GPR143P51810 404 aa8.19□□□□□ -1.1
SMAD4-217ENST00000611848 XKP51811 444 aa8.19□□□□□ -1.1
SMAD4-217ENST00000611848 PPP2R2BQ00005 443 aa8.19□□□□□ -1.1
SMAD4-217ENST00000611848 MFAP5Q13361 173 aa8.19□□□□□ -1.1
SMAD4-217ENST00000611848 PDE7AQ13946 482 aa8.19□□□□□ -1.1
SMAD4-217ENST00000611848 VEZF1Q14119 521 aa8.19□□□□□ -1.1
SMAD4-217ENST00000611848 VMACQ2NL98 169 aa8.19□□□□□ -1.1
SMAD4-217ENST00000611848 IGFL2Q6UWQ7 119 aa8.19□□□□□ -1.1
SMAD4-217ENST00000611848 ZNF621Q6ZSS3 439 aa8.19□□□□□ -1.1
SMAD4-217ENST00000611848 IKBIPQ70UQ0 350 aa8.19□□□□□ -1.1
SMAD4-217ENST00000611848 ZDHHC13Q8IUH4 622 aa8.19□□□□□ -1.1
SMAD4-217ENST00000611848 ALDH16A1Q8IZ83 802 aa8.19□□□□□ -1.1
SMAD4-217ENST00000611848 SAMD14Q8IZD0 417 aaPredicted RBP8.19□□□□□ -1.1
SMAD4-217ENST00000611848 CLECL1Q8IZS7 167 aa8.19□□□□□ -1.1
SMAD4-217ENST00000611848 LGI4Q8N135 537 aa8.19□□□□□ -1.1
SMAD4-217ENST00000611848 SIRT6Q8N6T7 355 aa8.19□□□□□ -1.1
SMAD4-217ENST00000611848 TEX19Q8NA77 164 aa8.19□□□□□ -1.1
SMAD4-217ENST00000611848 VPS37AQ8NEZ2 397 aa8.19□□□□□ -1.1
SMAD4-217ENST00000611848 GOT1L1Q8NHS2 421 aaPredicted RBP8.19□□□□□ -1.1
SMAD4-217ENST00000611848 PTPMT1Q8WUK0 201 aaPredicted RBP8.19□□□□□ -1.1
SMAD4-217ENST00000611848 CYGBQ8WWM9 190 aa8.19□□□□□ -1.1
SMAD4-217ENST00000611848 UCN3Q969E3 161 aa8.19□□□□□ -1.1
SMAD4-217ENST00000611848 NCLNQ969V3 563 aa8.19□□□□□ -1.1
SMAD4-217ENST00000611848 FBXL20Q96IG2 436 aa8.19□□□□□ -1.1
SMAD4-217ENST00000611848 ART5Q96L15 291 aa8.19□□□□□ -1.1
SMAD4-217ENST00000611848 ZNF354BQ96LW1 612 aa8.19□□□□□ -1.1
SMAD4-217ENST00000611848 OSBPL10Q9BXB5 764 aa8.19□□□□□ -1.1
SMAD4-217ENST00000611848 BHLHE41Q9C0J9 482 aaPredicted RBP8.19□□□□□ -1.1
SMAD4-217ENST00000611848 REEP4Q9H6H4 257 aa8.19□□□□□ -1.1
SMAD4-217ENST00000611848 MYNNQ9NPC7 610 aa8.19□□□□□ -1.1
SMAD4-217ENST00000611848 PAPOLBQ9NRJ5 636 aaKnown RBP8.19□□□□□ -1.1
SMAD4-217ENST00000611848 EHD3Q9NZN3 535 aa8.19□□□□□ -1.1
SMAD4-217ENST00000611848 PTGFRNQ9P2B2 879 aa8.19□□□□□ -1.1
SMAD4-217ENST00000611848 RALYQ9UKM9 306 aaKnown RBP8.19□□□□□ -1.1
SMAD4-217ENST00000611848 UTS2RQ9UKP6 389 aa8.19□□□□□ -1.1
SMAD4-217ENST00000611848 SAMD4AQ9UPU9 718 aaKnown RBP8.19□□□□□ -1.1
SMAD4-217ENST00000611848 NUP214P35658 2090 aaPredicted RBP8.19□□□□□ -1.1
SMAD4-217ENST00000611848 CPSF4O95639 269 aaKnown RBP8.18□□□□□ -1.1
SMAD4-217ENST00000611848 PDGFAP04085 211 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 THRBP10828 461 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 CPMP14384 443 aa8.18□□□□□ -1.1
SMAD4-217ENST00000611848 PORP16435 677 aaPredicted RBP8.18□□□□□ -1.1
SMAD4-217ENST00000611848 CSNK2A2P19784 350 aaPredicted RBP8.18□□□□□ -1.1
SMAD4-217ENST00000611848 DDCP20711 480 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms