RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 ZXDCQ2QGD7 858 aaPredicted RBP6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 LHX8Q68G74 356 aa6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 SFRP4Q6FHJ7 346 aaPredicted RBP6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 GLCCI1Q86VQ1 547 aa6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 SLC44A3Q8N4M1 653 aa6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 OR4K13Q8NH42 304 aa6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 ZNF563Q8TA94 476 aa6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 CTRCQ99895 268 aa6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 FUZQ9BT04 418 aa6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 RAB11FIP5Q9BXF6 653 aa6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 CDCA4Q9BXL8 241 aa6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 CACNG6Q9BXT2 260 aa6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 MS4A8Q9BY19 250 aa6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 LIPT1Q9Y234 373 aa6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 SESN1Q9Y6P5 492 aa6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 WDR81Q562E7 1941 aa6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 ANK1P16157 1881 aa6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 A0A0G2JPF8 293 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 UNC119BA6NIH7 251 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 HNRNPCL3B7ZW38 293 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 BLOC1S5-TXNDC5H3BN57 136 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 SOCS6O14544 535 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 HNRNPCL4P0DMR1 293 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 HK1P19367 917 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 HIST1H1TP22492 207 aaPredicted RBP6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 RAB40BQ12829 278 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 ILF3Q12906 894 aaKnown RBP eCLIP6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 MINDY4Q4G0A6 757 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 HDDC2Q7Z4H3 204 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 TMEM163Q8TC26 289 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 HERVK_113Q902F9 699 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 CDS1Q92903 461 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 NXPE3Q969Y0 559 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 RNF31Q96EP0 1072 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 OR7D2Q96RA2 312 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 GINS4Q9BRT9 223 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 ALG8Q9BVK2 526 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 GSDMCQ9BYG8 508 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 ZDHHC5Q9C0B5 715 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 HHATLQ9HCP6 504 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 SLC23A2Q9UGH3 650 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 RASD1Q9Y272 281 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 ATG4BQ9Y4P1 393 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 PCDHGB2Q9Y5G2 931 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 FKBP7Q9Y680 259 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 A3GALT2U3KPV4 340 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 CKAP5Q14008 2032 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 MAP1BP46821 2468 aaKnown RBP6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 SEC16AO15027 2179 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 ALPK2Q86TB3 2170 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 HYKKA2RU49 373 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 TRIM64A6NGJ6 449 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 ZSCAN5BA6NJL1 495 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 HMGN4O00479 90 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 UBXN7O94888 489 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 KAT7O95251 611 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 ACP2P11117 423 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 ITGB7P26010 798 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 SLC1A3P43003 542 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 HTR3AP46098 478 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 OR12D2P58182 307 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 PSPHP78330 225 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 DBPQ10586 325 aaPredicted RBP6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 PON3Q15166 354 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 ZNF542PQ5EBM4 170 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 ENTPD8Q5MY95 495 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 HLA-DQA1Q5Y7H0 255 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 PRICKLE2Q7Z3G6 844 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 TAF8Q7Z7C8 310 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 JAZF1Q86VZ6 243 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 ZNF761Q86XN6 746 aaPredicted RBP6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 LRRC25Q8N386 305 aaPredicted RBP6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 TNFAIP8L1Q8WVP5 186 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 TM9SF4Q92544 642 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 AMDHD1Q96NU7 426 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 INSM2Q96T92 566 aaPredicted RBP6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 PSD2Q9BQI7 771 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 ZNF717Q9BY31 904 aaPredicted RBP6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 HOXD1Q9GZZ0 328 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 TCF7L1Q9HCS4 588 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 HCFC2Q9Y5Z7 792 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 MIA3Q5JRA6 1907 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 PIKFYVEQ9Y2I7 2098 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 IGLV3-16A0A075B6K0 115 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 A0A087WUU8 490 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 ZC3H12DA2A288 527 aaKnown RBP6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 A8MUA0 341 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 GABRPO00591 440 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 TSPAN4O14817 238 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 FLRT2O43155 660 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 AIFM1O95831 613 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 PRPH2P23942 346 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 AK4P27144 223 aaPredicted RBP6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 IRS1P35568 1242 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 SOX18P35713 384 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 PRDX1Q06830 199 aaKnown RBP6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 CRYZQ08257 329 aaKnown RBP6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 SNTB2Q13425 540 aaKnown RBP6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 FGFBP1Q14512 234 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 ZNF267Q14586 743 aaPredicted RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms