RNA–Protein interactions for RNA: ENST00000607049.5

PKNOX1-210, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-210ENST00000607049 EQTNQ9NQ60 294 aa13.13□□□□□ -0.31
PKNOX1-210ENST00000607049 Q9UFV3 132 aa13.13□□□□□ -0.31
PKNOX1-210ENST00000607049 ACTL7BQ9Y614 415 aa13.13□□□□□ -0.31
PKNOX1-210ENST00000607049 CACNA1DQ01668 2161 aa13.13□□□□□ -0.31
PKNOX1-210ENST00000607049 NCOA6Q14686 2063 aaPredicted RBP13.12□□□□□ -0.31
PKNOX1-210ENST00000607049 WDR91A4D1P6 747 aa13.12□□□□□ -0.31
PKNOX1-210ENST00000607049 H0Y3Z8 333 aa13.12□□□□□ -0.31
PKNOX1-210ENST00000607049 C19orf84I3L1E1 186 aa13.12□□□□□ -0.31
PKNOX1-210ENST00000607049 EMC8O43402 210 aa13.12□□□□□ -0.31
PKNOX1-210ENST00000607049 NME6O75414 186 aaPredicted RBP13.12□□□□□ -0.31
PKNOX1-210ENST00000607049 TOXO94900 526 aa13.12□□□□□ -0.31
PKNOX1-210ENST00000607049 SOX30O94993 753 aa13.12□□□□□ -0.31
PKNOX1-210ENST00000607049 PSMG1O95456 288 aa13.12□□□□□ -0.31
PKNOX1-210ENST00000607049 IL33O95760 270 aa13.12□□□□□ -0.31
PKNOX1-210ENST00000607049 HPGDP15428 266 aa13.12□□□□□ -0.31
PKNOX1-210ENST00000607049 PRPS1L1P21108 318 aa13.12□□□□□ -0.31
PKNOX1-210ENST00000607049 DPP4P27487 766 aa13.12□□□□□ -0.31
PKNOX1-210ENST00000607049 TIMP3P35625 211 aa13.12□□□□□ -0.31
PKNOX1-210ENST00000607049 PTGDSP41222 190 aa13.12□□□□□ -0.31
PKNOX1-210ENST00000607049 ETV4P43268 484 aa13.12□□□□□ -0.31
PKNOX1-210ENST00000607049 PRIM2P49643 509 aa13.12□□□□□ -0.31
PKNOX1-210ENST00000607049 GAB1Q13480 694 aa13.12□□□□□ -0.31
PKNOX1-210ENST00000607049 PDE7AQ13946 482 aa13.12□□□□□ -0.31
PKNOX1-210ENST00000607049 GANABQ14697 944 aaKnown RBP13.12□□□□□ -0.31
PKNOX1-210ENST00000607049 CHI3L2Q15782 390 aa13.12□□□□□ -0.31
PKNOX1-210ENST00000607049 PRSS53Q2L4Q9 553 aa13.12□□□□□ -0.31
PKNOX1-210ENST00000607049 LSM12Q3MHD2 195 aaKnown RBP13.12□□□□□ -0.31
PKNOX1-210ENST00000607049 XKR7Q5GH72 579 aa13.12□□□□□ -0.31
PKNOX1-210ENST00000607049 CPTPQ5TA50 214 aa13.12□□□□□ -0.31
PKNOX1-210ENST00000607049 NSUN5P2Q63ZY6 315 aa13.12□□□□□ -0.31
PKNOX1-210ENST00000607049 DESI1Q6ICB0 168 aa13.12□□□□□ -0.31
PKNOX1-210ENST00000607049 ZCCHC12Q6PEW1 402 aa13.12□□□□□ -0.31
PKNOX1-210ENST00000607049 WDSUB1Q8N9V3 476 aa13.12□□□□□ -0.31
PKNOX1-210ENST00000607049 NUP43Q8NFH3 380 aa13.12□□□□□ -0.31
PKNOX1-210ENST00000607049 OR4N2Q8NGD1 307 aa13.12□□□□□ -0.31
PKNOX1-210ENST00000607049 SLC9A6Q92581 669 aa13.12□□□□□ -0.31
PKNOX1-210ENST00000607049 CIDECQ96AQ7 238 aaPredicted RBP13.12□□□□□ -0.31
PKNOX1-210ENST00000607049 NTNG2Q96CW9 530 aa13.12□□□□□ -0.31
PKNOX1-210ENST00000607049 C14orf79Q96F83 325 aa13.12□□□□□ -0.31
PKNOX1-210ENST00000607049 CHMP6Q96FZ7 201 aa13.12□□□□□ -0.31
PKNOX1-210ENST00000607049 SFXN2Q96NB2 322 aa13.12□□□□□ -0.31
PKNOX1-210ENST00000607049 TRIB1Q96RU8 372 aa13.12□□□□□ -0.31
PKNOX1-210ENST00000607049 CALHM2Q9HA72 323 aa13.12□□□□□ -0.31
PKNOX1-210ENST00000607049 FAM120CQ9NX05 1096 aaKnown RBP13.12□□□□□ -0.31
PKNOX1-210ENST00000607049 STOML1Q9UBI4 398 aa13.12□□□□□ -0.31
PKNOX1-210ENST00000607049 ATP6V1HQ9UI12 483 aa13.12□□□□□ -0.31
PKNOX1-210ENST00000607049 ZDHHC2Q9UIJ5 367 aa13.12□□□□□ -0.31
PKNOX1-210ENST00000607049 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.12□□□□□ -0.31
PKNOX1-210ENST00000607049 MRPS18CQ9Y3D5 142 aaKnown RBP13.12□□□□□ -0.31
PKNOX1-210ENST00000607049 CREBBPQ92793 2442 aa13.11□□□□□ -0.31
PKNOX1-210ENST00000607049 NINQ8N4C6 2090 aa13.11□□□□□ -0.31
PKNOX1-210ENST00000607049 A0A1W2PRB8 838 aa13.11□□□□□ -0.31
PKNOX1-210ENST00000607049 CD8B2A6NJW9 211 aa13.11□□□□□ -0.31
PKNOX1-210ENST00000607049 LINC01387J3KSC0 135 aa13.11□□□□□ -0.31
PKNOX1-210ENST00000607049 SCAMP2O15127 329 aaKnown RBP13.11□□□□□ -0.31
PKNOX1-210ENST00000607049 SCO2O43819 266 aa13.11□□□□□ -0.31
PKNOX1-210ENST00000607049 KRT16P08779 473 aa13.11□□□□□ -0.31
PKNOX1-210ENST00000607049 ALOX5P09917 674 aa13.11□□□□□ -0.31
PKNOX1-210ENST00000607049 PRF1P14222 555 aa13.11□□□□□ -0.31
PKNOX1-210ENST00000607049 CPN1P15169 458 aa13.11□□□□□ -0.31
PKNOX1-210ENST00000607049 CREB1P16220 341 aa13.11□□□□□ -0.31
PKNOX1-210ENST00000607049 MSX1P28360 303 aa13.11□□□□□ -0.31
PKNOX1-210ENST00000607049 DSCR4P56555 118 aaPredicted RBP13.11□□□□□ -0.31
PKNOX1-210ENST00000607049 ABCE1P61221 599 aaKnown RBP13.11□□□□□ -0.31
PKNOX1-210ENST00000607049 MLC1Q15049 377 aa13.11□□□□□ -0.31
PKNOX1-210ENST00000607049 SMU1Q2TAY7 513 aa13.11□□□□□ -0.31
PKNOX1-210ENST00000607049 SPDYE7PQ495Y7 208 aa13.11□□□□□ -0.31
PKNOX1-210ENST00000607049 C6orf136Q5SQH8 315 aa13.11□□□□□ -0.31
PKNOX1-210ENST00000607049 HHATQ5VTY9 493 aa13.11□□□□□ -0.31
PKNOX1-210ENST00000607049 IL23RQ5VWK5 629 aa13.11□□□□□ -0.31
PKNOX1-210ENST00000607049 OR5M10Q6IEU7 315 aa13.11□□□□□ -0.31
PKNOX1-210ENST00000607049 BHLHB9Q6PI77 547 aa13.11□□□□□ -0.31
PKNOX1-210ENST00000607049 EXOC3L1Q86VI1 746 aa13.11□□□□□ -0.31
PKNOX1-210ENST00000607049 ZPLD1Q8TCW7 415 aa13.11□□□□□ -0.31
PKNOX1-210ENST00000607049 JADE3Q92613 823 aa13.11□□□□□ -0.31
PKNOX1-210ENST00000607049 PGM2Q96G03 612 aa13.11□□□□□ -0.31
PKNOX1-210ENST00000607049 WDYHV1Q96HA8 205 aa13.11□□□□□ -0.31
PKNOX1-210ENST00000607049 PAIP2Q9BPZ3 127 aaKnown RBP13.11□□□□□ -0.31
PKNOX1-210ENST00000607049 G6PC3Q9BUM1 346 aa13.11□□□□□ -0.31
PKNOX1-210ENST00000607049 TRIM8Q9BZR9 551 aa13.11□□□□□ -0.31
PKNOX1-210ENST00000607049 ACBD3Q9H3P7 528 aa13.11□□□□□ -0.31
PKNOX1-210ENST00000607049 NOP53Q9NZM5 478 aaKnown RBP13.11□□□□□ -0.31
PKNOX1-210ENST00000607049 ZNF629Q9UEG4 869 aaPredicted RBP13.11□□□□□ -0.31
PKNOX1-210ENST00000607049 RAP2CQ9Y3L5 183 aa13.11□□□□□ -0.31
PKNOX1-210ENST00000607049 SNX8Q9Y5X2 465 aa13.11□□□□□ -0.31
PKNOX1-210ENST00000607049 TEX15Q9BXT5 2789 aa13.11□□□□□ -0.31
PKNOX1-210ENST00000607049 EML6Q6ZMW3 1958 aa13.11□□□□□ -0.31
PKNOX1-210ENST00000607049 CAPN3P20807 821 aa13.1□□□□□ -0.31
PKNOX1-210ENST00000607049 BMP5P22003 454 aa13.1□□□□□ -0.31
PKNOX1-210ENST00000607049 CHMP24386 653 aa13.1□□□□□ -0.31
PKNOX1-210ENST00000607049 LCN1P31025 176 aa13.1□□□□□ -0.31
PKNOX1-210ENST00000607049 ADH7P40394 386 aa13.1□□□□□ -0.31
PKNOX1-210ENST00000607049 FRKP42685 505 aaPredicted RBP13.1□□□□□ -0.31
PKNOX1-210ENST00000607049 RPL14P50914 215 aaKnown RBP13.1□□□□□ -0.31
PKNOX1-210ENST00000607049 DGKQP52824 942 aa13.1□□□□□ -0.31
PKNOX1-210ENST00000607049 EEFSECP57772 596 aaKnown RBP13.1□□□□□ -0.31
PKNOX1-210ENST00000607049 EEF1A1P68104 462 aaKnown RBP13.1□□□□□ -0.31
PKNOX1-210ENST00000607049 SRYQ05066 204 aa13.1□□□□□ -0.31
PKNOX1-210ENST00000607049 C17orf67Q0P5P2 114 aa13.1□□□□□ -0.31
PKNOX1-210ENST00000607049 STX5Q13190 355 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms