RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 ARPC4-TTLL3A0A0A6YYG9 625 aa4.26□□□□□ -1.73
LINC00397-202ENST00000606785 RNF212BA8MTL3 300 aa4.26□□□□□ -1.73
LINC00397-202ENST00000606785 MPTX1A8MV57 137 aa4.26□□□□□ -1.73
LINC00397-202ENST00000606785 ZSCAN12O43309 604 aa4.26□□□□□ -1.73
LINC00397-202ENST00000606785 ZNF749O43361 778 aa4.26□□□□□ -1.73
LINC00397-202ENST00000606785 SNNO75324 88 aaPredicted RBP4.26□□□□□ -1.73
LINC00397-202ENST00000606785 FRAT2O75474 233 aaPredicted RBP4.26□□□□□ -1.73
LINC00397-202ENST00000606785 SURF6O75683 361 aaKnown RBP4.26□□□□□ -1.73
LINC00397-202ENST00000606785 ADORA3P0DMS8 318 aa4.26□□□□□ -1.73
LINC00397-202ENST00000606785 CPN1P15169 458 aa4.26□□□□□ -1.73
LINC00397-202ENST00000606785 HNF1AP20823 631 aa4.26□□□□□ -1.73
LINC00397-202ENST00000606785 NT5EP21589 574 aa4.26□□□□□ -1.73
LINC00397-202ENST00000606785 UCP1P25874 307 aa4.26□□□□□ -1.73
LINC00397-202ENST00000606785 CALML3P27482 149 aa4.26□□□□□ -1.73
LINC00397-202ENST00000606785 NF2P35240 595 aa4.26□□□□□ -1.73
LINC00397-202ENST00000606785 SAA4P35542 130 aa4.26□□□□□ -1.73
LINC00397-202ENST00000606785 HSD17B2P37059 387 aa4.26□□□□□ -1.73
LINC00397-202ENST00000606785 MNAT1P51948 309 aa4.26□□□□□ -1.73
LINC00397-202ENST00000606785 VCPP55072 806 aaKnown RBP4.26□□□□□ -1.73
LINC00397-202ENST00000606785 PJVKQ0ZLH3 352 aa4.26□□□□□ -1.73
LINC00397-202ENST00000606785 ZMYND11Q15326 602 aa4.26□□□□□ -1.73
LINC00397-202ENST00000606785 CAMK4Q16566 473 aa4.26□□□□□ -1.73
LINC00397-202ENST00000606785 KRT71Q3SY84 523 aa4.26□□□□□ -1.73
LINC00397-202ENST00000606785 AGAP7PQ5VUJ5 663 aa4.26□□□□□ -1.73
LINC00397-202ENST00000606785 BSPRYQ5W0U4 402 aa4.26□□□□□ -1.73
LINC00397-202ENST00000606785 SEL1L3Q68CR1 1132 aa4.26□□□□□ -1.73
LINC00397-202ENST00000606785 PYHIN1Q6K0P9 492 aa4.26□□□□□ -1.73
LINC00397-202ENST00000606785 PNCKQ6P2M8 343 aa4.26□□□□□ -1.73
LINC00397-202ENST00000606785 DPY19L4Q7Z388 723 aa4.26□□□□□ -1.73
LINC00397-202ENST00000606785 SPEM1Q8N4L4 309 aa4.26□□□□□ -1.73
LINC00397-202ENST00000606785 TRIML2Q8N7C3 387 aa4.26□□□□□ -1.73
LINC00397-202ENST00000606785 ZNF781Q8N8C0 355 aa4.26□□□□□ -1.73
LINC00397-202ENST00000606785 TRMT10AQ8TBZ6 339 aaKnown RBP4.26□□□□□ -1.73
LINC00397-202ENST00000606785 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.26□□□□□ -1.73
LINC00397-202ENST00000606785 BIRC7Q96CA5 298 aa4.26□□□□□ -1.73
LINC00397-202ENST00000606785 TUBGCP3Q96CW5 907 aa4.26□□□□□ -1.73
LINC00397-202ENST00000606785 ATXN7L3BQ96GX2 97 aa4.26□□□□□ -1.73
LINC00397-202ENST00000606785 SYT15Q9BQS2 421 aa4.26□□□□□ -1.73
LINC00397-202ENST00000606785 NCOR1P1Q9H4R4 102 aa4.26□□□□□ -1.73
LINC00397-202ENST00000606785 VCPKMTQ9H867 229 aa4.26□□□□□ -1.73
LINC00397-202ENST00000606785 VPS37BQ9H9H4 285 aa4.26□□□□□ -1.73
LINC00397-202ENST00000606785 GPN2Q9H9Y4 310 aaPredicted RBP4.26□□□□□ -1.73
LINC00397-202ENST00000606785 DEPPQ9NTK1 212 aa4.26□□□□□ -1.73
LINC00397-202ENST00000606785 TAS2R16Q9NYV7 291 aa4.26□□□□□ -1.73
LINC00397-202ENST00000606785 SEC14L4Q9UDX3 406 aa4.26□□□□□ -1.73
LINC00397-202ENST00000606785 CIDEBQ9UHD4 219 aa4.26□□□□□ -1.73
LINC00397-202ENST00000606785 PRELID1Q9Y255 219 aa4.26□□□□□ -1.73
LINC00397-202ENST00000606785 EIF3LQ9Y262 564 aaKnown RBP4.26□□□□□ -1.73
LINC00397-202ENST00000606785 MYO15BQ96JP2 1530 aa4.26□□□□□ -1.73
LINC00397-202ENST00000606785 ZBED9Q6R2W3 1325 aa4.25□□□□□ -1.73
LINC00397-202ENST00000606785 A0A087X002 238 aa4.25□□□□□ -1.73
LINC00397-202ENST00000606785 EME2A4GXA9 379 aaPredicted RBP4.25□□□□□ -1.73
LINC00397-202ENST00000606785 K7ERI5 159 aa4.25□□□□□ -1.73
LINC00397-202ENST00000606785 TFECO14948 347 aaPredicted RBP4.25□□□□□ -1.73
LINC00397-202ENST00000606785 KCNAB3O43448 404 aa4.25□□□□□ -1.73
LINC00397-202ENST00000606785 DUX1O43812 170 aa4.25□□□□□ -1.73
LINC00397-202ENST00000606785 TSC22D2O75157 780 aa4.25□□□□□ -1.73
LINC00397-202ENST00000606785 PDE5AO76074 875 aa4.25□□□□□ -1.73
LINC00397-202ENST00000606785 ZFAND5O76080 213 aa4.25□□□□□ -1.73
LINC00397-202ENST00000606785 OR9G9P0C7N8 305 aa4.25□□□□□ -1.73
LINC00397-202ENST00000606785 CALB2P22676 271 aa4.25□□□□□ -1.73
LINC00397-202ENST00000606785 HAND2P61296 217 aa4.25□□□□□ -1.73
LINC00397-202ENST00000606785 TNFRSF17Q02223 184 aa4.25□□□□□ -1.73
LINC00397-202ENST00000606785 DDX39BQ13838 428 aaKnown RBP4.25□□□□□ -1.73
LINC00397-202ENST00000606785 CD226Q15762 336 aa4.25□□□□□ -1.73
LINC00397-202ENST00000606785 HACD2Q6Y1H2 254 aa4.25□□□□□ -1.73
LINC00397-202ENST00000606785 NOTCH2NLQ7Z3S9 236 aa4.25□□□□□ -1.73
LINC00397-202ENST00000606785 NUFIP2Q7Z417 695 aaKnown RBP4.25□□□□□ -1.73
LINC00397-202ENST00000606785 PARGQ86W56 976 aa4.25□□□□□ -1.73
LINC00397-202ENST00000606785 ZNF683Q8IZ20 524 aa4.25□□□□□ -1.73
LINC00397-202ENST00000606785 SAMD12Q8N8I0 201 aa4.25□□□□□ -1.73
LINC00397-202ENST00000606785 ANKFN1Q8N957 763 aa4.25□□□□□ -1.73
LINC00397-202ENST00000606785 ZNRF1Q8ND25 227 aa4.25□□□□□ -1.73
LINC00397-202ENST00000606785 OR52J3Q8NH60 311 aa4.25□□□□□ -1.73
LINC00397-202ENST00000606785 C11orf45Q8TAV5 145 aa4.25□□□□□ -1.73
LINC00397-202ENST00000606785 NANPQ8TBE9 248 aa4.25□□□□□ -1.73
LINC00397-202ENST00000606785 EMG1Q92979 244 aaKnown RBP4.25□□□□□ -1.73
LINC00397-202ENST00000606785 ART4Q93070 314 aa4.25□□□□□ -1.73
LINC00397-202ENST00000606785 SLC41A3Q96GZ6 507 aa4.25□□□□□ -1.73
LINC00397-202ENST00000606785 OMDQ99983 421 aa4.25□□□□□ -1.73
LINC00397-202ENST00000606785 UQCC2Q9BRT2 126 aa4.25□□□□□ -1.73
LINC00397-202ENST00000606785 RPP25Q9BUL9 199 aaKnown RBP4.25□□□□□ -1.73
LINC00397-202ENST00000606785 ST6GALNAC5Q9BVH7 336 aa4.25□□□□□ -1.73
LINC00397-202ENST00000606785 TSGA10Q9BZW7 698 aa4.25□□□□□ -1.73
LINC00397-202ENST00000606785 NSRP1Q9H0G5 558 aaKnown RBP4.25□□□□□ -1.73
LINC00397-202ENST00000606785 FGF22Q9HCT0 170 aa4.25□□□□□ -1.73
LINC00397-202ENST00000606785 NDE1Q9NXR1 346 aa4.25□□□□□ -1.73
LINC00397-202ENST00000606785 ATP10DQ9P241 1426 aa4.25□□□□□ -1.73
LINC00397-202ENST00000606785 CLEC4AQ9UMR7 237 aa4.25□□□□□ -1.73
LINC00397-202ENST00000606785 EXOGQ9Y2C4 368 aaKnown RBP4.25□□□□□ -1.73
LINC00397-202ENST00000606785 GSTK1Q9Y2Q3 226 aa4.25□□□□□ -1.73
LINC00397-202ENST00000606785 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.25□□□□□ -1.73
LINC00397-202ENST00000606785 BCLAF3A2AJT9 711 aaKnown RBP4.24□□□□□ -1.73
LINC00397-202ENST00000606785 ARHGEF33A8MVX0 844 aa4.24□□□□□ -1.73
LINC00397-202ENST00000606785 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.24□□□□□ -1.73
LINC00397-202ENST00000606785 IL1BP01584 269 aa4.24□□□□□ -1.73
LINC00397-202ENST00000606785 IGLV1-44P01699 117 aa4.24□□□□□ -1.73
LINC00397-202ENST00000606785 AMBPP02760 352 aa4.24□□□□□ -1.73
LINC00397-202ENST00000606785 OPN1LWP04000 364 aa4.24□□□□□ -1.73
LINC00397-202ENST00000606785 RHOXF2BP0C7M4 288 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms