RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 ACAD11Q709F0 780 aa17.55■□□□□ 0.4
SRSF4-206ENST00000605204 ZGRF1Q86YA3 2104 aa17.55■□□□□ 0.4
SRSF4-206ENST00000605204 OR56A1Q8NGH5 318 aa17.55■□□□□ 0.4
SRSF4-206ENST00000605204 SFXN5Q8TD22 340 aa17.55■□□□□ 0.4
SRSF4-206ENST00000605204 TESCQ96BS2 214 aa17.55■□□□□ 0.4
SRSF4-206ENST00000605204 PPP1R36Q96LQ0 422 aa17.55■□□□□ 0.4
SRSF4-206ENST00000605204 GNRHR2Q96P88 292 aa17.55■□□□□ 0.4
SRSF4-206ENST00000605204 DUSP26Q9BV47 211 aa17.55■□□□□ 0.4
SRSF4-206ENST00000605204 SDHAF3Q9NRP4 125 aa17.55■□□□□ 0.4
SRSF4-206ENST00000605204 ZCCHC3Q9NUD5 404 aaKnown RBP17.55■□□□□ 0.4
SRSF4-206ENST00000605204 FAM120CQ9NX05 1096 aaKnown RBP17.55■□□□□ 0.4
SRSF4-206ENST00000605204 GIN1Q9NXP7 522 aa17.55■□□□□ 0.4
SRSF4-206ENST00000605204 ACAD8Q9UKU7 415 aa17.55■□□□□ 0.4
SRSF4-206ENST00000605204 LIPGQ9Y5X9 500 aa17.55■□□□□ 0.4
SRSF4-206ENST00000605204 EVI2BP34910 448 aa17.54■□□□□ 0.4
SRSF4-206ENST00000605204 PTGDSP41222 190 aa17.54■□□□□ 0.4
SRSF4-206ENST00000605204 MAP3K8P41279 467 aa17.54■□□□□ 0.4
SRSF4-206ENST00000605204 GAB1Q13480 694 aa17.54■□□□□ 0.4
SRSF4-206ENST00000605204 SF3B4Q15427 424 aaKnown RBP eCLIP17.54■□□□□ 0.41e-11■■■■□ 21.4
SRSF4-206ENST00000605204 GXYLT1Q4G148 440 aa17.54■□□□□ 0.4
SRSF4-206ENST00000605204 SPATA19Q7Z5L4 167 aa17.54■□□□□ 0.4
SRSF4-206ENST00000605204 PLCZ1Q86YW0 608 aa17.54■□□□□ 0.4
SRSF4-206ENST00000605204 PM20D2Q8IYS1 436 aa17.54■□□□□ 0.4
SRSF4-206ENST00000605204 KRTCAP2Q8N6L1 136 aa17.54■□□□□ 0.4
SRSF4-206ENST00000605204 VPS37AQ8NEZ2 397 aa17.54■□□□□ 0.4
SRSF4-206ENST00000605204 OR8J2Q8NGG1 315 aa17.54■□□□□ 0.4
SRSF4-206ENST00000605204 GPR151Q8TDV0 419 aa17.54■□□□□ 0.4
SRSF4-206ENST00000605204 EFHD2Q96C19 240 aaPredicted RBP17.54■□□□□ 0.4
SRSF4-206ENST00000605204 FAM120BQ96EK7 910 aaKnown RBP17.54■□□□□ 0.4
SRSF4-206ENST00000605204 STACQ99469 402 aa17.54■□□□□ 0.4
SRSF4-206ENST00000605204 SH3GL2Q99962 352 aa17.54■□□□□ 0.4
SRSF4-206ENST00000605204 DPY30Q9C005 99 aa17.54■□□□□ 0.4
SRSF4-206ENST00000605204 EQTNQ9NQ60 294 aa17.54■□□□□ 0.4
SRSF4-206ENST00000605204 DUSP22Q9NRW4 184 aa17.54■□□□□ 0.4
SRSF4-206ENST00000605204 SIRT3Q9NTG7 399 aaPredicted RBP17.54■□□□□ 0.4
SRSF4-206ENST00000605204 PNPOQ9NVS9 261 aa17.54■□□□□ 0.4
SRSF4-206ENST00000605204 COQ3Q9NZJ6 369 aa17.54■□□□□ 0.4
SRSF4-206ENST00000605204 AKAP9Q99996 3911 aa17.54■□□□□ 0.4
SRSF4-206ENST00000605204 APCP25054 2843 aa17.54■□□□□ 0.4
SRSF4-206ENST00000605204 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.53■□□□□ 0.4
SRSF4-206ENST00000605204 RNASET2O00584 256 aaKnown RBP17.53■□□□□ 0.4
SRSF4-206ENST00000605204 ADAM10O14672 748 aa17.53■□□□□ 0.4
SRSF4-206ENST00000605204 TRAPPC6AO75865 159 aa17.53■□□□□ 0.4
SRSF4-206ENST00000605204 ALOX5P09917 674 aa17.53■□□□□ 0.4
SRSF4-206ENST00000605204 CYP4B1P13584 511 aa17.53■□□□□ 0.4
SRSF4-206ENST00000605204 ACVR2AP27037 513 aa17.53■□□□□ 0.4
SRSF4-206ENST00000605204 GABRA3P34903 492 aa17.53■□□□□ 0.4
SRSF4-206ENST00000605204 KIR3DL1P43629 444 aa17.53■□□□□ 0.4
SRSF4-206ENST00000605204 PRKAG1P54619 331 aa17.53■□□□□ 0.4
SRSF4-206ENST00000605204 ADORA2A-AS1P86434 159 aa17.53■□□□□ 0.4
SRSF4-206ENST00000605204 NHSL2Q5HYW2 709 aa17.53■□□□□ 0.4
SRSF4-206ENST00000605204 OR4N2Q8NGD1 307 aa17.53■□□□□ 0.4
SRSF4-206ENST00000605204 PIWIL2Q8TC59 973 aaKnown RBP17.53■□□□□ 0.4
SRSF4-206ENST00000605204 ARL8AQ96BM9 186 aa17.53■□□□□ 0.4
SRSF4-206ENST00000605204 GIMAP5Q96F15 307 aa17.53■□□□□ 0.4
SRSF4-206ENST00000605204 G6PC3Q9BUM1 346 aa17.53■□□□□ 0.4
SRSF4-206ENST00000605204 GALNT9Q9HCQ5 603 aa17.53■□□□□ 0.4
SRSF4-206ENST00000605204 SNX8Q9Y5X2 465 aa17.53■□□□□ 0.4
SRSF4-206ENST00000605204 C15orf38-AP3S2A0A0A6YYH1 394 aa17.53■□□□□ 0.4
SRSF4-206ENST00000605204 GNB5O14775 395 aa17.53■□□□□ 0.4
SRSF4-206ENST00000605204 NME6O75414 186 aaPredicted RBP17.53■□□□□ 0.4
SRSF4-206ENST00000605204 NGFRP08138 427 aa17.53■□□□□ 0.4
SRSF4-206ENST00000605204 ENDOUP21128 410 aaKnown RBP17.53■□□□□ 0.4
SRSF4-206ENST00000605204 DIO3P55073 304 aa17.53■□□□□ 0.4
SRSF4-206ENST00000605204 LRRC74AQ0VAA2 488 aa17.53■□□□□ 0.4
SRSF4-206ENST00000605204 TOMM20Q15388 145 aa17.53■□□□□ 0.4
SRSF4-206ENST00000605204 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.53■□□□□ 0.41e-11■■■■■ 73.9
SRSF4-206ENST00000605204 SPDYE7PQ495Y7 208 aa17.53■□□□□ 0.4
SRSF4-206ENST00000605204 EMC4Q5J8M3 183 aa17.53■□□□□ 0.4
SRSF4-206ENST00000605204 ANXA8L1Q5VT79 327 aa17.53■□□□□ 0.4
SRSF4-206ENST00000605204 SLC9A6Q92581 669 aa17.53■□□□□ 0.4
SRSF4-206ENST00000605204 SLC6A15Q9H2J7 730 aa17.53■□□□□ 0.4
SRSF4-206ENST00000605204 CHST11Q9NPF2 352 aa17.53■□□□□ 0.4
SRSF4-206ENST00000605204 PNPLA3Q9NST1 481 aa17.53■□□□□ 0.4
SRSF4-206ENST00000605204 SPRR3Q9UBC9 169 aa17.53■□□□□ 0.4
SRSF4-206ENST00000605204 PCDHGB4Q9UN71 923 aa17.53■□□□□ 0.4
SRSF4-206ENST00000605204 FAF1Q9UNN5 650 aaPredicted RBP17.53■□□□□ 0.4
SRSF4-206ENST00000605204 MRPS18CQ9Y3D5 142 aaKnown RBP17.53■□□□□ 0.4
SRSF4-206ENST00000605204 SDHDO14521 159 aa17.52■□□□□ 0.39
SRSF4-206ENST00000605204 CFLARO15519 480 aa17.52■□□□□ 0.39
SRSF4-206ENST00000605204 C6orf47O95873 294 aa17.52■□□□□ 0.39
SRSF4-206ENST00000605204 ACTL6AO96019 429 aa17.52■□□□□ 0.39
SRSF4-206ENST00000605204 SRD5A2P31213 254 aa17.52■□□□□ 0.39
SRSF4-206ENST00000605204 CCT3P49368 545 aaKnown RBP17.52■□□□□ 0.39
SRSF4-206ENST00000605204 GANABQ14697 944 aaKnown RBP17.52■□□□□ 0.39
SRSF4-206ENST00000605204 PGS1Q32NB8 556 aa17.52■□□□□ 0.39
SRSF4-206ENST00000605204 EXOSC6Q5RKV6 272 aaKnown RBP17.52■□□□□ 0.39
SRSF4-206ENST00000605204 B3GNT6Q6ZMB0 384 aa17.52■□□□□ 0.39
SRSF4-206ENST00000605204 WDSUB1Q8N9V3 476 aa17.52■□□□□ 0.39
SRSF4-206ENST00000605204 ASB5Q8WWX0 329 aa17.52■□□□□ 0.39
SRSF4-206ENST00000605204 ZNF75CPQ92670 426 aaPredicted RBP17.52■□□□□ 0.39
SRSF4-206ENST00000605204 RND1Q92730 232 aa17.52■□□□□ 0.39
SRSF4-206ENST00000605204 RMND5BQ96G75 393 aaPredicted RBP17.52■□□□□ 0.39
SRSF4-206ENST00000605204 C7orf26Q96N11 449 aa17.52■□□□□ 0.39
SRSF4-206ENST00000605204 OR2B2Q9GZK3 357 aa17.52■□□□□ 0.39
SRSF4-206ENST00000605204 ACBD3Q9H3P7 528 aa17.52■□□□□ 0.39
SRSF4-206ENST00000605204 PPP4R1LQ9P1A2 415 aa17.52■□□□□ 0.39
SRSF4-206ENST00000605204 ENO4A6NNW6 628 aa17.51■□□□□ 0.39
SRSF4-206ENST00000605204 AHRRA9YTQ3 701 aa17.51■□□□□ 0.39
SRSF4-206ENST00000605204 E9PBE3 544 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms