RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 PSMD4P55036 377 aaKnown RBP15.67■□□□□ 0.1
HERC3-214ENST00000601319 WDR4P57081 412 aaKnown RBP15.67■□□□□ 0.1
HERC3-214ENST00000601319 NUP107P57740 925 aa15.67■□□□□ 0.1
HERC3-214ENST00000601319 PRR5P85299 388 aa15.67■□□□□ 0.1
HERC3-214ENST00000601319 BST1Q10588 318 aa15.67■□□□□ 0.1
HERC3-214ENST00000601319 GAB1Q13480 694 aa15.67■□□□□ 0.1
HERC3-214ENST00000601319 EXOSC6Q5RKV6 272 aaKnown RBP15.67■□□□□ 0.1
HERC3-214ENST00000601319 C1orf185Q5T7R7 199 aa15.67■□□□□ 0.1
HERC3-214ENST00000601319 VASNQ6EMK4 673 aa15.67■□□□□ 0.1
HERC3-214ENST00000601319 RTL6Q6ICC9 239 aa15.67■□□□□ 0.1
HERC3-214ENST00000601319 ZNF585AQ6P3V2 769 aa15.67■□□□□ 0.1
HERC3-214ENST00000601319 ZCCHC12Q6PEW1 402 aa15.67■□□□□ 0.1
HERC3-214ENST00000601319 PLCZ1Q86YW0 608 aa15.67■□□□□ 0.1
HERC3-214ENST00000601319 OR7A2PQ8NGA2 310 aa15.67■□□□□ 0.1
HERC3-214ENST00000601319 CA5BP1Q8WTZ4 195 aa15.67■□□□□ 0.1
HERC3-214ENST00000601319 SDCCAG3Q96C92 435 aa15.67■□□□□ 0.1
HERC3-214ENST00000601319 COQ8BQ96D53 544 aa15.67■□□□□ 0.1
HERC3-214ENST00000601319 GIMAP5Q96F15 307 aa15.67■□□□□ 0.1
HERC3-214ENST00000601319 TTYH2Q9BSA4 534 aa15.67■□□□□ 0.1
HERC3-214ENST00000601319 PRDM14Q9GZV8 571 aa15.67■□□□□ 0.1
HERC3-214ENST00000601319 TMBIM4Q9HC24 238 aa15.67■□□□□ 0.1
HERC3-214ENST00000601319 SIRT3Q9NTG7 399 aaPredicted RBP15.67■□□□□ 0.1
HERC3-214ENST00000601319 FAM120CQ9NX05 1096 aaKnown RBP15.67■□□□□ 0.1
HERC3-214ENST00000601319 MAPRE3Q9UPY8 281 aa15.67■□□□□ 0.1
HERC3-214ENST00000601319 FBN2P35556 2912 aa15.67■□□□□ 0.1
HERC3-214ENST00000601319 NUP214P35658 2090 aaPredicted RBP15.66■□□□□ 0.1
HERC3-214ENST00000601319 NOTCH2Q04721 2471 aa15.66■□□□□ 0.1
HERC3-214ENST00000601319 C15orf38-AP3S2A0A0A6YYH1 394 aa15.66■□□□□ 0.1
HERC3-214ENST00000601319 FAM47E-STBD1D6RA91 191 aa15.66■□□□□ 0.1
HERC3-214ENST00000601319 EMC8O43402 210 aa15.66■□□□□ 0.1
HERC3-214ENST00000601319 FADS1O60427 444 aa15.66■□□□□ 0.1
HERC3-214ENST00000601319 ACTL6AO96019 429 aa15.66■□□□□ 0.1
HERC3-214ENST00000601319 GLI4P10075 376 aa15.66■□□□□ 0.1
HERC3-214ENST00000601319 LAMP1P11279 417 aa15.66■□□□□ 0.1
HERC3-214ENST00000601319 CLDN8P56748 225 aa15.66■□□□□ 0.1
HERC3-214ENST00000601319 MAGOHP61326 146 aaKnown RBP15.66■□□□□ 0.1
HERC3-214ENST00000601319 CASP8Q14790 479 aa15.66■□□□□ 0.1
HERC3-214ENST00000601319 CPTPQ5TA50 214 aa15.66■□□□□ 0.1
HERC3-214ENST00000601319 SP5Q6BEB4 398 aaPredicted RBP15.66■□□□□ 0.1
HERC3-214ENST00000601319 MFSD12Q6NUT3 480 aa15.66■□□□□ 0.1
HERC3-214ENST00000601319 PM20D2Q8IYS1 436 aa15.66■□□□□ 0.1
HERC3-214ENST00000601319 ULK2Q8IYT8 1036 aa15.66■□□□□ 0.1
HERC3-214ENST00000601319 ANKRD42Q8N9B4 389 aa15.66■□□□□ 0.1
HERC3-214ENST00000601319 FAM83FQ8NEG4 500 aaPredicted RBP15.66■□□□□ 0.1
HERC3-214ENST00000601319 NUP43Q8NFH3 380 aa15.66■□□□□ 0.1
HERC3-214ENST00000601319 OR5P2Q8WZ92 322 aa15.66■□□□□ 0.1
HERC3-214ENST00000601319 ZBTB9Q96C00 473 aa15.66■□□□□ 0.1
HERC3-214ENST00000601319 DOCK7Q96N67 2140 aa15.66■□□□□ 0.1
HERC3-214ENST00000601319 PRPF18Q99633 342 aaKnown RBP15.66■□□□□ 0.1
HERC3-214ENST00000601319 BHLHE41Q9C0J9 482 aaPredicted RBP15.66■□□□□ 0.1
HERC3-214ENST00000601319 NEUROD4Q9HD90 331 aa15.66■□□□□ 0.1
HERC3-214ENST00000601319 EQTNQ9NQ60 294 aa15.66■□□□□ 0.1
HERC3-214ENST00000601319 SERHLQ9NQF3 203 aa15.66■□□□□ 0.1
HERC3-214ENST00000601319 RNF6Q9Y252 685 aa15.66■□□□□ 0.1
HERC3-214ENST00000601319 MRPS18CQ9Y3D5 142 aaKnown RBP15.66■□□□□ 0.1
HERC3-214ENST00000601319 CACNA1DQ01668 2161 aa15.65■□□□□ 0.1
HERC3-214ENST00000601319 A0A1W2PRB8 838 aa15.65■□□□□ 0.1
HERC3-214ENST00000601319 SNNO75324 88 aaPredicted RBP15.65■□□□□ 0.1
HERC3-214ENST00000601319 KCNH1O95259 989 aa15.65■□□□□ 0.1
HERC3-214ENST00000601319 G6PDP11413 515 aa15.65■□□□□ 0.1
HERC3-214ENST00000601319 SRD5A2P31213 254 aa15.65■□□□□ 0.1
HERC3-214ENST00000601319 PMPCAQ10713 525 aa15.65■□□□□ 0.1
HERC3-214ENST00000601319 TOMM20Q15388 145 aa15.65■□□□□ 0.1
HERC3-214ENST00000601319 WDR53Q7Z5U6 358 aaPredicted RBP15.65■□□□□ 0.1
HERC3-214ENST00000601319 KRTCAP2Q8N6L1 136 aa15.65■□□□□ 0.1
HERC3-214ENST00000601319 ACBD4Q8NC06 268 aa15.65■□□□□ 0.1
HERC3-214ENST00000601319 LILRB4Q8NHJ6 448 aa15.65■□□□□ 0.1
HERC3-214ENST00000601319 FAM120BQ96EK7 910 aaKnown RBP15.65■□□□□ 0.1
HERC3-214ENST00000601319 TIMP4Q99727 224 aa15.65■□□□□ 0.1
HERC3-214ENST00000601319 PAIP2Q9BPZ3 127 aaKnown RBP15.65■□□□□ 0.1
HERC3-214ENST00000601319 UGT2B28Q9BY64 529 aa15.65■□□□□ 0.1
HERC3-214ENST00000601319 AKTIPQ9H8T0 292 aa15.65■□□□□ 0.1
HERC3-214ENST00000601319 MEAF6Q9HAF1 191 aa15.65■□□□□ 0.1
HERC3-214ENST00000601319 PKDREJQ9NTG1 2253 aa15.65■□□□□ 0.1
HERC3-214ENST00000601319 KIAA1549Q9HCM3 1950 aa15.64■□□□□ 0.09
HERC3-214ENST00000601319 C2orf72A6NCS6 295 aa15.64■□□□□ 0.09
HERC3-214ENST00000601319 AHRRA9YTQ3 701 aa15.64■□□□□ 0.09
HERC3-214ENST00000601319 NGFRP08138 427 aa15.64■□□□□ 0.09
HERC3-214ENST00000601319 ACP2P11117 423 aa15.64■□□□□ 0.09
HERC3-214ENST00000601319 LCN1P31025 176 aa15.64■□□□□ 0.09
HERC3-214ENST00000601319 GABRA3P34903 492 aa15.64■□□□□ 0.09
HERC3-214ENST00000601319 GCKP35557 465 aa15.64■□□□□ 0.09
HERC3-214ENST00000601319 DIO3P55073 304 aa15.64■□□□□ 0.09
HERC3-214ENST00000601319 SF3B4Q15427 424 aaKnown RBP eCLIP15.64■□□□□ 0.09
HERC3-214ENST00000601319 LSM12Q3MHD2 195 aaKnown RBP15.64■□□□□ 0.09
HERC3-214ENST00000601319 ACSF3Q4G176 576 aaPredicted RBP15.64■□□□□ 0.09
HERC3-214ENST00000601319 EIPR1Q53HC9 387 aa15.64■□□□□ 0.09
HERC3-214ENST00000601319 WIPI1Q5MNZ9 446 aaPredicted RBP15.64■□□□□ 0.09
HERC3-214ENST00000601319 RIPPLY2Q5TAB7 128 aa15.64■□□□□ 0.09
HERC3-214ENST00000601319 OGFOD2Q6N063 350 aa15.64■□□□□ 0.09
HERC3-214ENST00000601319 SZRD1Q7Z422 152 aa15.64■□□□□ 0.09
HERC3-214ENST00000601319 FADS6Q8N9I5 356 aa15.64■□□□□ 0.09
HERC3-214ENST00000601319 SFXN5Q8TD22 340 aa15.64■□□□□ 0.09
HERC3-214ENST00000601319 GPR151Q8TDV0 419 aa15.64■□□□□ 0.09
HERC3-214ENST00000601319 MARVELD3Q96A59 401 aa15.64■□□□□ 0.09
HERC3-214ENST00000601319 MOAP1Q96BY2 351 aa15.64■□□□□ 0.09
HERC3-214ENST00000601319 PCNX3Q9H6A9 2034 aa15.64■□□□□ 0.09
HERC3-214ENST00000601319 HHATLQ9HCP6 504 aa15.64■□□□□ 0.09
HERC3-214ENST00000601319 SDHAF3Q9NRP4 125 aa15.64■□□□□ 0.09
HERC3-214ENST00000601319 ZCCHC3Q9NUD5 404 aaKnown RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms