RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 ZNF24P17028 368 aa13.7□□□□□ -0.22
DDX39A-221ENST00000593026 RFC3P40938 356 aa13.7□□□□□ -0.22
DDX39A-221ENST00000593026 CASP3P42574 277 aa13.7□□□□□ -0.22
DDX39A-221ENST00000593026 KHKP50053 298 aa13.7□□□□□ -0.22
DDX39A-221ENST00000593026 CASP9P55211 416 aa13.7□□□□□ -0.22
DDX39A-221ENST00000593026 KLF10Q13118 480 aa13.7□□□□□ -0.22
DDX39A-221ENST00000593026 BICRALQ6AI39 1079 aa13.7□□□□□ -0.22
DDX39A-221ENST00000593026 TNFAIP8L2Q6P589 184 aaPredicted RBP13.7□□□□□ -0.22
DDX39A-221ENST00000593026 FIGNL1Q6PIW4 674 aa13.7□□□□□ -0.22
DDX39A-221ENST00000593026 ZFP62Q8NB50 900 aaPredicted RBP13.7□□□□□ -0.22
DDX39A-221ENST00000593026 DNAJB8Q8NHS0 232 aa13.7□□□□□ -0.22
DDX39A-221ENST00000593026 ZFP90Q8TF47 636 aa13.7□□□□□ -0.22
DDX39A-221ENST00000593026 FAR1Q8WVX9 515 aa13.7□□□□□ -0.22
DDX39A-221ENST00000593026 PHF12Q96QT6 1004 aa13.7□□□□□ -0.22
DDX39A-221ENST00000593026 NODALQ96S42 347 aa13.7□□□□□ -0.22
DDX39A-221ENST00000593026 G6PC3Q9BUM1 346 aa13.7□□□□□ -0.22
DDX39A-221ENST00000593026 ANGPTL4Q9BY76 406 aa13.7□□□□□ -0.22
DDX39A-221ENST00000593026 PAIP1Q9H074 479 aaKnown RBP13.7□□□□□ -0.22
DDX39A-221ENST00000593026 OR51I1Q9H343 314 aa13.7□□□□□ -0.22
DDX39A-221ENST00000593026 OLAHQ9NV23 265 aa13.7□□□□□ -0.22
DDX39A-221ENST00000593026 KLRF1Q9NZS2 232 aa13.7□□□□□ -0.22
DDX39A-221ENST00000593026 LEF1Q9UJU2 399 aaPredicted RBP13.7□□□□□ -0.22
DDX39A-221ENST00000593026 NDUFAF1Q9Y375 327 aa13.7□□□□□ -0.22
DDX39A-221ENST00000593026 CAPN7Q9Y6W3 813 aa13.7□□□□□ -0.22
DDX39A-221ENST00000593026 PINLYPA6NC86 204 aa13.69□□□□□ -0.22
DDX39A-221ENST00000593026 CCDC22O60826 627 aa13.69□□□□□ -0.22
DDX39A-221ENST00000593026 ICOSLGO75144 302 aa13.69□□□□□ -0.22
DDX39A-221ENST00000593026 SNX4O95219 450 aa13.69□□□□□ -0.22
DDX39A-221ENST00000593026 AGR2O95994 175 aa13.69□□□□□ -0.22
DDX39A-221ENST00000593026 IGKV1D-16P01601 117 aa13.69□□□□□ -0.22
DDX39A-221ENST00000593026 PLA2G2AP14555 144 aa13.69□□□□□ -0.22
DDX39A-221ENST00000593026 PTPN6P29350 595 aa13.69□□□□□ -0.22
DDX39A-221ENST00000593026 ADSLP30566 484 aaPredicted RBP13.69□□□□□ -0.22
DDX39A-221ENST00000593026 ANXA11P50995 505 aaKnown RBP13.69□□□□□ -0.22
DDX39A-221ENST00000593026 ALDH6A1Q02252 535 aaKnown RBP13.69□□□□□ -0.22
DDX39A-221ENST00000593026 PLGLB1Q02325 96 aa13.69□□□□□ -0.22
DDX39A-221ENST00000593026 SNTA1Q13424 505 aa13.69□□□□□ -0.22
DDX39A-221ENST00000593026 MAPRE2Q15555 327 aa13.69□□□□□ -0.22
DDX39A-221ENST00000593026 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.69□□□□□ -0.22
DDX39A-221ENST00000593026 GTDC1Q4AE62 458 aa13.69□□□□□ -0.22
DDX39A-221ENST00000593026 PAGE3Q5JUK9 113 aa13.69□□□□□ -0.22
DDX39A-221ENST00000593026 DCST2Q5T1A1 773 aa13.69□□□□□ -0.22
DDX39A-221ENST00000593026 LRIF1Q5T3J3 769 aa13.69□□□□□ -0.22
DDX39A-221ENST00000593026 CCNJQ5T5M9 372 aa13.69□□□□□ -0.22
DDX39A-221ENST00000593026 TMEM81Q6P7N7 255 aa13.69□□□□□ -0.22
DDX39A-221ENST00000593026 GALNT10Q86SR1 603 aa13.69□□□□□ -0.22
DDX39A-221ENST00000593026 RNF130Q86XS8 419 aa13.69□□□□□ -0.22
DDX39A-221ENST00000593026 PNPT1Q8TCS8 783 aaKnown RBP13.69□□□□□ -0.22
DDX39A-221ENST00000593026 ZNF597Q96LX8 424 aa13.69□□□□□ -0.22
DDX39A-221ENST00000593026 OSBPL11Q9BXB4 747 aa13.69□□□□□ -0.22
DDX39A-221ENST00000593026 TPT1P8Q9HAU6 139 aa13.69□□□□□ -0.22
DDX39A-221ENST00000593026 EXD2Q9NVH0 621 aa13.69□□□□□ -0.22
DDX39A-221ENST00000593026 ARMCX1Q9P291 453 aa13.69□□□□□ -0.22
DDX39A-221ENST00000593026 BOKQ9UMX3 212 aaPredicted RBP13.69□□□□□ -0.22
DDX39A-221ENST00000593026 PCDHB14Q9Y5E9 798 aa13.69□□□□□ -0.22
DDX39A-221ENST00000593026 KCNE3Q9Y6H6 103 aa13.69□□□□□ -0.22
DDX39A-221ENST00000593026 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.69□□□□□ -0.22
DDX39A-221ENST00000593026 J3QKU1 62 aa13.68□□□□□ -0.22
DDX39A-221ENST00000593026 ACOT7O00154 380 aa13.68□□□□□ -0.22
DDX39A-221ENST00000593026 SLC22A2O15244 555 aa13.68□□□□□ -0.22
DDX39A-221ENST00000593026 ASNA1O43681 348 aa13.68□□□□□ -0.22
DDX39A-221ENST00000593026 UTS2O95399 124 aa13.68□□□□□ -0.22
DDX39A-221ENST00000593026 C1QCP02747 245 aa13.68□□□□□ -0.22
DDX39A-221ENST00000593026 OR12D1P0DN82 309 aa13.68□□□□□ -0.22
DDX39A-221ENST00000593026 ATP6V1C1P21283 382 aa13.68□□□□□ -0.22
DDX39A-221ENST00000593026 LCN1P31025 176 aa13.68□□□□□ -0.22
DDX39A-221ENST00000593026 TXNL4AP83876 142 aaKnown RBP13.68□□□□□ -0.22
DDX39A-221ENST00000593026 ATAD3BQ5T9A4 648 aa13.68□□□□□ -0.22
DDX39A-221ENST00000593026 SLC30A6Q6NXT4 461 aa13.68□□□□□ -0.22
DDX39A-221ENST00000593026 C16orf62Q7Z3J2 963 aa13.68□□□□□ -0.22
DDX39A-221ENST00000593026 PACS2Q86VP3 889 aa13.68□□□□□ -0.22
DDX39A-221ENST00000593026 FAM110BQ8TC76 370 aa13.68□□□□□ -0.22
DDX39A-221ENST00000593026 NR4A3Q92570 626 aa13.68□□□□□ -0.22
DDX39A-221ENST00000593026 RAB8BQ92930 207 aa13.68□□□□□ -0.22
DDX39A-221ENST00000593026 AURKBQ96GD4 344 aaPredicted RBP13.68□□□□□ -0.22
DDX39A-221ENST00000593026 JSRP1Q96MG2 331 aaPredicted RBP13.68□□□□□ -0.22
DDX39A-221ENST00000593026 BARD1Q99728 777 aaKnown RBP13.68□□□□□ -0.22
DDX39A-221ENST00000593026 TTTY12Q9BZ98 90 aa13.68□□□□□ -0.22
DDX39A-221ENST00000593026 IL1RL2Q9HB29 575 aa13.68□□□□□ -0.22
DDX39A-221ENST00000593026 PROK2Q9HC23 129 aa13.68□□□□□ -0.22
DDX39A-221ENST00000593026 GALNT9Q9HCQ5 603 aa13.68□□□□□ -0.22
DDX39A-221ENST00000593026 TUBA8Q9NY65 449 aaPredicted RBP13.68□□□□□ -0.22
DDX39A-221ENST00000593026 ADAM21Q9UKJ8 722 aa13.68□□□□□ -0.22
DDX39A-221ENST00000593026 EML6Q6ZMW3 1958 aa13.68□□□□□ -0.22
DDX39A-221ENST00000593026 FAM166BA8MTA8 275 aa13.67□□□□□ -0.22
DDX39A-221ENST00000593026 CLIC1O00299 241 aa13.67□□□□□ -0.22
DDX39A-221ENST00000593026 TFECO14948 347 aaPredicted RBP13.67□□□□□ -0.22
DDX39A-221ENST00000593026 SHOX2O60902 331 aaPredicted RBP13.67□□□□□ -0.22
DDX39A-221ENST00000593026 TRIM3O75382 744 aaPredicted RBP13.67□□□□□ -0.22
DDX39A-221ENST00000593026 AK1P00568 194 aa13.67□□□□□ -0.22
DDX39A-221ENST00000593026 HOXB9P17482 250 aaPredicted RBP13.67□□□□□ -0.22
DDX39A-221ENST00000593026 EVI2BP34910 448 aa13.67□□□□□ -0.22
DDX39A-221ENST00000593026 PTGDSP41222 190 aa13.67□□□□□ -0.22
DDX39A-221ENST00000593026 MAGEA8P43361 318 aa13.67□□□□□ -0.22
DDX39A-221ENST00000593026 MASP1P48740 699 aa13.67□□□□□ -0.22
DDX39A-221ENST00000593026 CLK3P49761 638 aaKnown RBP13.67□□□□□ -0.22
DDX39A-221ENST00000593026 FOXO1Q12778 655 aa13.67□□□□□ -0.22
DDX39A-221ENST00000593026 RNFT1Q5M7Z0 435 aa13.67□□□□□ -0.22
DDX39A-221ENST00000593026 COX20Q5RI15 118 aa13.67□□□□□ -0.22
DDX39A-221ENST00000593026 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms