RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 CDKL4Q5MAI5 379 aa6.96□□□□□ -1.3
VMP1-213ENST00000591877 GRTP1Q5TC63 336 aa6.96□□□□□ -1.3
VMP1-213ENST00000591877 NIPAL1Q6NVV3 410 aa6.96□□□□□ -1.3
VMP1-213ENST00000591877 TMIGD1Q6UXZ0 262 aa6.96□□□□□ -1.3
VMP1-213ENST00000591877 QSOX2Q6ZRP7 698 aa6.96□□□□□ -1.3
VMP1-213ENST00000591877 CMC1Q7Z7K0 106 aa6.96□□□□□ -1.3
VMP1-213ENST00000591877 ISCA2Q86U28 154 aa6.96□□□□□ -1.3
VMP1-213ENST00000591877 CCDC25Q86WR0 208 aa6.96□□□□□ -1.3
VMP1-213ENST00000591877 GPSM1Q86YR5 675 aa6.96□□□□□ -1.3
VMP1-213ENST00000591877 TBC1D19Q8N5T2 526 aa6.96□□□□□ -1.3
VMP1-213ENST00000591877 BCORP1Q8N888 145 aa6.96□□□□□ -1.3
VMP1-213ENST00000591877 C11orf44Q8N8P7 122 aa6.96□□□□□ -1.3
VMP1-213ENST00000591877 Q8TCH9 128 aa6.96□□□□□ -1.3
VMP1-213ENST00000591877 NR4A3Q92570 626 aa6.96□□□□□ -1.3
VMP1-213ENST00000591877 CDKL2Q92772 493 aa6.96□□□□□ -1.3
VMP1-213ENST00000591877 MS4A6EQ96DS6 147 aa6.96□□□□□ -1.3
VMP1-213ENST00000591877 RNF125Q96EQ8 232 aa6.96□□□□□ -1.3
VMP1-213ENST00000591877 WDR34Q96EX3 536 aa6.96□□□□□ -1.3
VMP1-213ENST00000591877 ZNF354BQ96LW1 612 aa6.96□□□□□ -1.3
VMP1-213ENST00000591877 C5orf34Q96MH7 638 aa6.96□□□□□ -1.3
VMP1-213ENST00000591877 LPAR4Q99677 370 aa6.96□□□□□ -1.3
VMP1-213ENST00000591877 CHCHD6Q9BRQ6 235 aa6.96□□□□□ -1.3
VMP1-213ENST00000591877 RHBGQ9H310 441 aa6.96□□□□□ -1.3
VMP1-213ENST00000591877 PRDM13Q9H4Q3 707 aa6.96□□□□□ -1.3
VMP1-213ENST00000591877 NT5DC2Q9H857 520 aa6.96□□□□□ -1.3
VMP1-213ENST00000591877 CLK4Q9HAZ1 481 aaKnown RBP6.96□□□□□ -1.3
VMP1-213ENST00000591877 AKIP1Q9NQ31 210 aa6.96□□□□□ -1.3
VMP1-213ENST00000591877 ANKRD10Q9NXR5 420 aa6.96□□□□□ -1.3
VMP1-213ENST00000591877 GTF3C1Q12789 2109 aa6.95□□□□□ -1.3
VMP1-213ENST00000591877 LRBAP50851 2863 aa6.95□□□□□ -1.3
VMP1-213ENST00000591877 PGPEP1LA6NFU8 196 aa6.95□□□□□ -1.3
VMP1-213ENST00000591877 URADA6NGE7 173 aa6.95□□□□□ -1.3
VMP1-213ENST00000591877 SAGE2PA6NJ88 616 aa6.95□□□□□ -1.3
VMP1-213ENST00000591877 A8MUA0 341 aa6.95□□□□□ -1.3
VMP1-213ENST00000591877 PROM1O43490 865 aa6.95□□□□□ -1.3
VMP1-213ENST00000591877 STK16O75716 305 aa6.95□□□□□ -1.3
VMP1-213ENST00000591877 NEURL1O76050 574 aa6.95□□□□□ -1.3
VMP1-213ENST00000591877 UQCRHP07919 91 aa6.95□□□□□ -1.3
VMP1-213ENST00000591877 CSF1P09603 554 aa6.95□□□□□ -1.3
VMP1-213ENST00000591877 RNH1P13489 461 aaKnown RBP6.95□□□□□ -1.3
VMP1-213ENST00000591877 JAK1P23458 1154 aa6.95□□□□□ -1.3
VMP1-213ENST00000591877 CHMP24386 653 aa6.95□□□□□ -1.3
VMP1-213ENST00000591877 PPP2R1BP30154 601 aa6.95□□□□□ -1.3
VMP1-213ENST00000591877 SPRP35270 261 aaPredicted RBP6.95□□□□□ -1.3
VMP1-213ENST00000591877 THBS4P35443 961 aa6.95□□□□□ -1.3
VMP1-213ENST00000591877 ATP6V0D1P61421 351 aa6.95□□□□□ -1.3
VMP1-213ENST00000591877 CAV1Q03135 178 aa6.95□□□□□ -1.3
VMP1-213ENST00000591877 ACTN3Q08043 901 aaPredicted RBP6.95□□□□□ -1.3
VMP1-213ENST00000591877 TBL3Q12788 808 aaKnown RBP6.95□□□□□ -1.3
VMP1-213ENST00000591877 ILF2Q12905 390 aaKnown RBP6.95□□□□□ -1.3
VMP1-213ENST00000591877 DOC2AQ14183 400 aa6.95□□□□□ -1.3
VMP1-213ENST00000591877 ICAM4Q14773 271 aa6.95□□□□□ -1.3
VMP1-213ENST00000591877 GPR68Q15743 365 aa6.95□□□□□ -1.3
VMP1-213ENST00000591877 MEP1AQ16819 746 aa6.95□□□□□ -1.3
VMP1-213ENST00000591877 ZNF766Q5HY98 468 aa6.95□□□□□ -1.3
VMP1-213ENST00000591877 LIPMQ5VYY2 423 aa6.95□□□□□ -1.3
VMP1-213ENST00000591877 SPINK14Q6IE38 97 aa6.95□□□□□ -1.3
VMP1-213ENST00000591877 SULT1C3Q6IMI6 304 aa6.95□□□□□ -1.3
VMP1-213ENST00000591877 CTAGE3PQ8IX95 158 aa6.95□□□□□ -1.3
VMP1-213ENST00000591877 CENPLQ8N0S6 344 aaPredicted RBP6.95□□□□□ -1.3
VMP1-213ENST00000591877 TCAIMQ8N3R3 496 aa6.95□□□□□ -1.3
VMP1-213ENST00000591877 SCMH1Q96GD3 660 aa6.95□□□□□ -1.3
VMP1-213ENST00000591877 ATOH8Q96SQ7 321 aa6.95□□□□□ -1.3
VMP1-213ENST00000591877 NPAS1Q99742 590 aa6.95□□□□□ -1.3
VMP1-213ENST00000591877 LRRC1Q9BTT6 524 aa6.95□□□□□ -1.3
VMP1-213ENST00000591877 RAB17Q9H0T7 212 aa6.95□□□□□ -1.3
VMP1-213ENST00000591877 EHD1Q9H4M9 534 aa6.95□□□□□ -1.3
VMP1-213ENST00000591877 CDCP1Q9H5V8 836 aa6.95□□□□□ -1.3
VMP1-213ENST00000591877 ALG9Q9H6U8 611 aa6.95□□□□□ -1.3
VMP1-213ENST00000591877 ZDHHC18Q9NUE0 388 aa6.95□□□□□ -1.3
VMP1-213ENST00000591877 DNAJC11Q9NVH1 559 aa6.95□□□□□ -1.3
VMP1-213ENST00000591877 WWOXQ9NZC7 414 aa6.95□□□□□ -1.3
VMP1-213ENST00000591877 CD274Q9NZQ7 290 aa6.95□□□□□ -1.3
VMP1-213ENST00000591877 ABI3Q9P2A4 366 aa6.95□□□□□ -1.3
VMP1-213ENST00000591877 TXNDC16Q9P2K2 825 aa6.95□□□□□ -1.3
VMP1-213ENST00000591877 TEKT2Q9UIF3 430 aa6.95□□□□□ -1.3
VMP1-213ENST00000591877 ZNF223Q9UK11 482 aaPredicted RBP6.95□□□□□ -1.3
VMP1-213ENST00000591877 UTP11Q9Y3A2 253 aaKnown RBP6.95□□□□□ -1.3
VMP1-213ENST00000591877 NCOA6Q14686 2063 aaPredicted RBP6.95□□□□□ -1.3
VMP1-213ENST00000591877 PCNX1Q96RV3 2341 aa6.94□□□□□ -1.3
VMP1-213ENST00000591877 UQCRHLA0A096LP55 91 aa6.94□□□□□ -1.3
VMP1-213ENST00000591877 A0A1W2PPH5 198 aa6.94□□□□□ -1.3
VMP1-213ENST00000591877 ASPDHA6ND91 283 aa6.94□□□□□ -1.3
VMP1-213ENST00000591877 GABRR3A8MPY1 467 aa6.94□□□□□ -1.3
VMP1-213ENST00000591877 CLGNO14967 610 aa6.94□□□□□ -1.3
VMP1-213ENST00000591877 ERI3O43414 337 aaKnown RBP6.94□□□□□ -1.3
VMP1-213ENST00000591877 ZG16O60844 167 aa6.94□□□□□ -1.3
VMP1-213ENST00000591877 PPP3CBP16298 524 aa6.94□□□□□ -1.3
VMP1-213ENST00000591877 TFEBP19484 476 aa6.94□□□□□ -1.3
VMP1-213ENST00000591877 CERS1P27544 350 aa6.94□□□□□ -1.3
VMP1-213ENST00000591877 PGM1P36871 562 aa6.94□□□□□ -1.3
VMP1-213ENST00000591877 DCTP40126 519 aa6.94□□□□□ -1.3
VMP1-213ENST00000591877 GPR143P51810 404 aa6.94□□□□□ -1.3
VMP1-213ENST00000591877 PLA2G16P53816 162 aa6.94□□□□□ -1.3
VMP1-213ENST00000591877 RAB38P57729 211 aa6.94□□□□□ -1.3
VMP1-213ENST00000591877 STXBP1P61764 594 aaKnown RBP6.94□□□□□ -1.3
VMP1-213ENST00000591877 SKP1P63208 163 aa6.94□□□□□ -1.3
VMP1-213ENST00000591877 CHIT1Q13231 466 aa6.94□□□□□ -1.3
VMP1-213ENST00000591877 BMPR2Q13873 1038 aa6.94□□□□□ -1.3
VMP1-213ENST00000591877 CBFBQ13951 182 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms