RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 C3orf14Q9HBI5 128 aa10.53□□□□□ -0.72
VMP1-211ENST00000591315 SERHLQ9NQF3 203 aa10.53□□□□□ -0.72
VMP1-211ENST00000591315 ATAD3AQ9NVI7 634 aa10.53□□□□□ -0.72
VMP1-211ENST00000591315 GPATCH2Q9NW75 528 aa10.53□□□□□ -0.72
VMP1-211ENST00000591315 KLRF1Q9NZS2 232 aa10.53□□□□□ -0.72
VMP1-211ENST00000591315 BOKQ9UMX3 212 aaPredicted RBP10.53□□□□□ -0.72
VMP1-211ENST00000591315 MAPRE3Q9UPY8 281 aa10.53□□□□□ -0.72
VMP1-211ENST00000591315 SLC5A6Q9Y289 635 aa10.53□□□□□ -0.72
VMP1-211ENST00000591315 CACNA1CQ13936 2221 aa10.52□□□□□ -0.73
VMP1-211ENST00000591315 NPIPA5A0A0B4J1W7 369 aa10.52□□□□□ -0.73
VMP1-211ENST00000591315 A1L4Q6 167 aa10.52□□□□□ -0.73
VMP1-211ENST00000591315 NPIPA2E9PIF3 369 aa10.52□□□□□ -0.73
VMP1-211ENST00000591315 NPIPA7E9PJI5 369 aa10.52□□□□□ -0.73
VMP1-211ENST00000591315 NPIPA3F8WFD2 350 aa10.52□□□□□ -0.73
VMP1-211ENST00000591315 SLCO1B7G3V0H7 640 aa10.52□□□□□ -0.73
VMP1-211ENST00000591315 ACOT7O00154 380 aa10.52□□□□□ -0.73
VMP1-211ENST00000591315 CCL21O00585 134 aa10.52□□□□□ -0.73
VMP1-211ENST00000591315 SCO2O43819 266 aa10.52□□□□□ -0.73
VMP1-211ENST00000591315 FADS1O60427 444 aa10.52□□□□□ -0.73
VMP1-211ENST00000591315 ZG16O60844 167 aa10.52□□□□□ -0.73
VMP1-211ENST00000591315 TRAPPC6AO75865 159 aa10.52□□□□□ -0.73
VMP1-211ENST00000591315 IL33O95760 270 aa10.52□□□□□ -0.73
VMP1-211ENST00000591315 IGHG3P01860 377 aa10.52□□□□□ -0.73
VMP1-211ENST00000591315 IFI6P09912 130 aa10.52□□□□□ -0.73
VMP1-211ENST00000591315 NPIPA8P0DM63 369 aa10.52□□□□□ -0.73
VMP1-211ENST00000591315 ABOP16442 354 aa10.52□□□□□ -0.73
VMP1-211ENST00000591315 TCEA1P23193 301 aaKnown RBP10.52□□□□□ -0.73
VMP1-211ENST00000591315 GDF1P27539 372 aa10.52□□□□□ -0.73
VMP1-211ENST00000591315 IL12BP29460 328 aa10.52□□□□□ -0.73
VMP1-211ENST00000591315 PTGS2P35354 604 aa10.52□□□□□ -0.73
VMP1-211ENST00000591315 SOAT1P35610 550 aa10.52□□□□□ -0.73
VMP1-211ENST00000591315 CDKN2CP42773 168 aa10.52□□□□□ -0.73
VMP1-211ENST00000591315 CA7P43166 264 aa10.52□□□□□ -0.73
VMP1-211ENST00000591315 KIR3DL1P43629 444 aa10.52□□□□□ -0.73
VMP1-211ENST00000591315 MASP1P48740 699 aa10.52□□□□□ -0.73
VMP1-211ENST00000591315 MRPS22P82650 360 aaKnown RBP10.52□□□□□ -0.73
VMP1-211ENST00000591315 SF3A3Q12874 501 aaKnown RBP eCLIP10.52□□□□□ -0.73
VMP1-211ENST00000591315 SLC10A1Q14973 349 aa10.52□□□□□ -0.73
VMP1-211ENST00000591315 GRAMD1BQ3KR37 738 aa10.52□□□□□ -0.73
VMP1-211ENST00000591315 SPDYE7PQ495Y7 208 aa10.52□□□□□ -0.73
VMP1-211ENST00000591315 CYP27C1Q4G0S4 372 aa10.52□□□□□ -0.73
VMP1-211ENST00000591315 EIPR1Q53HC9 387 aa10.52□□□□□ -0.73
VMP1-211ENST00000591315 TIGD3Q6B0B8 471 aa10.52□□□□□ -0.73
VMP1-211ENST00000591315 PAOXQ6QHF9 649 aa10.52□□□□□ -0.73
VMP1-211ENST00000591315 Q6ZPB1 254 aaPredicted RBP10.52□□□□□ -0.73
VMP1-211ENST00000591315 YRDCQ86U90 279 aaKnown RBP10.52□□□□□ -0.73
VMP1-211ENST00000591315 RPRMLQ8N4K4 120 aa10.52□□□□□ -0.73
VMP1-211ENST00000591315 CDRT4Q8N9R6 151 aa10.52□□□□□ -0.73
VMP1-211ENST00000591315 OR8J2Q8NGG1 315 aa10.52□□□□□ -0.73
VMP1-211ENST00000591315 OR4A15Q8NGL6 344 aa10.52□□□□□ -0.73
VMP1-211ENST00000591315 OR5M9Q8NGP3 310 aa10.52□□□□□ -0.73
VMP1-211ENST00000591315 CEP70Q8NHQ1 597 aa10.52□□□□□ -0.73
VMP1-211ENST00000591315 RFWD2Q8NHY2 731 aa10.52□□□□□ -0.73
VMP1-211ENST00000591315 SSC4DQ8WTU2 575 aa10.52□□□□□ -0.73
VMP1-211ENST00000591315 RNF138Q8WVD3 245 aa10.52□□□□□ -0.73
VMP1-211ENST00000591315 JADE3Q92613 823 aa10.52□□□□□ -0.73
VMP1-211ENST00000591315 CDS1Q92903 461 aa10.52□□□□□ -0.73
VMP1-211ENST00000591315 RELTQ969Z4 430 aa10.52□□□□□ -0.73
VMP1-211ENST00000591315 MAGEB18Q96M61 343 aa10.52□□□□□ -0.73
VMP1-211ENST00000591315 SECISBP2Q96T21 854 aaKnown RBP10.52□□□□□ -0.73
VMP1-211ENST00000591315 UBQLN3Q9H347 655 aa10.52□□□□□ -0.73
VMP1-211ENST00000591315 Q9N2J8 555 aa10.52□□□□□ -0.73
VMP1-211ENST00000591315 FBXL2Q9UKC9 423 aa10.52□□□□□ -0.73
VMP1-211ENST00000591315 C15orf41Q9Y2V0 281 aa10.52□□□□□ -0.73
VMP1-211ENST00000591315 SLC6A5Q9Y345 797 aa10.52□□□□□ -0.73
VMP1-211ENST00000591315 NCOA6Q14686 2063 aaPredicted RBP10.52□□□□□ -0.73
VMP1-211ENST00000591315 WIPF3A6NGB9 483 aa10.51□□□□□ -0.73
VMP1-211ENST00000591315 E9PBE3 544 aa10.51□□□□□ -0.73
VMP1-211ENST00000591315 SNPHO15079 494 aa10.51□□□□□ -0.73
VMP1-211ENST00000591315 KCNK2O95069 426 aa10.51□□□□□ -0.73
VMP1-211ENST00000591315 SNX4O95219 450 aa10.51□□□□□ -0.73
VMP1-211ENST00000591315 UTS2O95399 124 aa10.51□□□□□ -0.73
VMP1-211ENST00000591315 GSNP06396 782 aa10.51□□□□□ -0.73
VMP1-211ENST00000591315 TPOP07202 933 aa10.51□□□□□ -0.73
VMP1-211ENST00000591315 ALOX5P09917 674 aa10.51□□□□□ -0.73
VMP1-211ENST00000591315 PTPN6P29350 595 aa10.51□□□□□ -0.73
VMP1-211ENST00000591315 S100A3P33764 101 aa10.51□□□□□ -0.73
VMP1-211ENST00000591315 EVI2BP34910 448 aa10.51□□□□□ -0.73
VMP1-211ENST00000591315 KRT20P35900 424 aa10.51□□□□□ -0.73
VMP1-211ENST00000591315 MAN2A2P49641 1150 aa10.51□□□□□ -0.73
VMP1-211ENST00000591315 PNLIPRP2P54317 469 aa10.51□□□□□ -0.73
VMP1-211ENST00000591315 AQP5P55064 265 aa10.51□□□□□ -0.73
VMP1-211ENST00000591315 RBPJQ06330 500 aa10.51□□□□□ -0.73
VMP1-211ENST00000591315 STX5Q13190 355 aa10.51□□□□□ -0.73
VMP1-211ENST00000591315 EFR3AQ14156 821 aa10.51□□□□□ -0.73
VMP1-211ENST00000591315 ZNHIT3Q15649 155 aaPredicted RBP10.51□□□□□ -0.73
VMP1-211ENST00000591315 DECR1Q16698 335 aa10.51□□□□□ -0.73
VMP1-211ENST00000591315 PDCD4Q53EL6 469 aaKnown RBP10.51□□□□□ -0.73
VMP1-211ENST00000591315 WIPI1Q5MNZ9 446 aaPredicted RBP10.51□□□□□ -0.73
VMP1-211ENST00000591315 TBCELQ5QJ74 424 aa10.51□□□□□ -0.73
VMP1-211ENST00000591315 SLC30A6Q6NXT4 461 aa10.51□□□□□ -0.73
VMP1-211ENST00000591315 BNC2Q6ZN30 1099 aaPredicted RBP10.51□□□□□ -0.73
VMP1-211ENST00000591315 RGS9BPQ6ZS82 235 aa10.51□□□□□ -0.73
VMP1-211ENST00000591315 C6orf120Q7Z4R8 191 aa10.51□□□□□ -0.73
VMP1-211ENST00000591315 MARCH3Q86UD3 253 aa10.51□□□□□ -0.73
VMP1-211ENST00000591315 CD163Q86VB7 1156 aa10.51□□□□□ -0.73
VMP1-211ENST00000591315 PACS2Q86VP3 889 aa10.51□□□□□ -0.73
VMP1-211ENST00000591315 LRRC34Q8IZ02 419 aa10.51□□□□□ -0.73
VMP1-211ENST00000591315 OR5D16Q8NGK9 328 aa10.51□□□□□ -0.73
VMP1-211ENST00000591315 FAM57AQ8TBR7 257 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms