RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 MARVELD3Q96A59 401 aa11.02□□□□□ -0.65
TPM4-212ENST00000590180 NTNG2Q96CW9 530 aa11.02□□□□□ -0.65
TPM4-212ENST00000590180 CHMP6Q96FZ7 201 aa11.02□□□□□ -0.65
TPM4-212ENST00000590180 TIMP4Q99727 224 aa11.02□□□□□ -0.65
TPM4-212ENST00000590180 TTYH2Q9BSA4 534 aa11.02□□□□□ -0.65
TPM4-212ENST00000590180 YIPF4Q9BSR8 244 aa11.02□□□□□ -0.65
TPM4-212ENST00000590180 LMF2Q9BU23 707 aaKnown RBP11.02□□□□□ -0.65
TPM4-212ENST00000590180 UCK2Q9BZX2 261 aa11.02□□□□□ -0.65
TPM4-212ENST00000590180 AKTIPQ9H8T0 292 aa11.02□□□□□ -0.65
TPM4-212ENST00000590180 TMBIM4Q9HC24 238 aa11.02□□□□□ -0.65
TPM4-212ENST00000590180 SDHAF3Q9NRP4 125 aa11.02□□□□□ -0.65
TPM4-212ENST00000590180 ATAD3AQ9NVI7 634 aa11.02□□□□□ -0.65
TPM4-212ENST00000590180 PNPOQ9NVS9 261 aa11.02□□□□□ -0.65
TPM4-212ENST00000590180 NKIRAS1Q9NYS0 192 aa11.02□□□□□ -0.65
TPM4-212ENST00000590180 CAMK2AQ9UQM7 478 aa11.02□□□□□ -0.65
TPM4-212ENST00000590180 SNX8Q9Y5X2 465 aa11.02□□□□□ -0.65
TPM4-212ENST00000590180 NUP214P35658 2090 aaPredicted RBP11.02□□□□□ -0.65
TPM4-212ENST00000590180 MED12Q93074 2177 aa11.01□□□□□ -0.65
TPM4-212ENST00000590180 FAM90A27PA6NNH2 459 aa11.01□□□□□ -0.65
TPM4-212ENST00000590180 CFLARO15519 480 aa11.01□□□□□ -0.65
TPM4-212ENST00000590180 SCO2O43819 266 aa11.01□□□□□ -0.65
TPM4-212ENST00000590180 KCNH1O95259 989 aa11.01□□□□□ -0.65
TPM4-212ENST00000590180 PSMG1O95456 288 aa11.01□□□□□ -0.65
TPM4-212ENST00000590180 IL33O95760 270 aa11.01□□□□□ -0.65
TPM4-212ENST00000590180 IFI6P09912 130 aa11.01□□□□□ -0.65
TPM4-212ENST00000590180 PRPS1L1P21108 318 aa11.01□□□□□ -0.65
TPM4-212ENST00000590180 CHRNB4P30926 498 aa11.01□□□□□ -0.65
TPM4-212ENST00000590180 FRKP42685 505 aaPredicted RBP11.01□□□□□ -0.65
TPM4-212ENST00000590180 CLDN8P56748 225 aa11.01□□□□□ -0.65
TPM4-212ENST00000590180 WDR4P57081 412 aaKnown RBP11.01□□□□□ -0.65
TPM4-212ENST00000590180 PGS1Q32NB8 556 aa11.01□□□□□ -0.65
TPM4-212ENST00000590180 LSM12Q3MHD2 195 aaKnown RBP11.01□□□□□ -0.65
TPM4-212ENST00000590180 SPDYE7PQ495Y7 208 aa11.01□□□□□ -0.65
TPM4-212ENST00000590180 VASNQ6EMK4 673 aa11.01□□□□□ -0.65
TPM4-212ENST00000590180 RTL6Q6ICC9 239 aa11.01□□□□□ -0.65
TPM4-212ENST00000590180 ULK2Q8IYT8 1036 aa11.01□□□□□ -0.65
TPM4-212ENST00000590180 KIRREL3Q8IZU9 778 aa11.01□□□□□ -0.65
TPM4-212ENST00000590180 NATD1Q8N6N6 113 aa11.01□□□□□ -0.65
TPM4-212ENST00000590180 CDRT4Q8N9R6 151 aa11.01□□□□□ -0.65
TPM4-212ENST00000590180 OR4K17Q8NGC6 315 aa11.01□□□□□ -0.65
TPM4-212ENST00000590180 LILRB4Q8NHJ6 448 aa11.01□□□□□ -0.65
TPM4-212ENST00000590180 OR5P2Q8WZ92 322 aa11.01□□□□□ -0.65
TPM4-212ENST00000590180 PIK3R3Q92569 461 aa11.01□□□□□ -0.65
TPM4-212ENST00000590180 JADE3Q92613 823 aa11.01□□□□□ -0.65
TPM4-212ENST00000590180 DTNBP1Q96EV8 351 aa11.01□□□□□ -0.65
TPM4-212ENST00000590180 RMND5BQ96G75 393 aaPredicted RBP11.01□□□□□ -0.65
TPM4-212ENST00000590180 C16orf58Q96GQ5 468 aa11.01□□□□□ -0.65
TPM4-212ENST00000590180 SORT1Q99523 831 aa11.01□□□□□ -0.65
TPM4-212ENST00000590180 NUF2Q9BZD4 464 aa11.01□□□□□ -0.65
TPM4-212ENST00000590180 DSN1Q9H410 356 aa11.01□□□□□ -0.65
TPM4-212ENST00000590180 KCNJ16Q9NPI9 418 aa11.01□□□□□ -0.65
TPM4-212ENST00000590180 TAS2R10Q9NYW0 307 aa11.01□□□□□ -0.65
TPM4-212ENST00000590180 NOP53Q9NZM5 478 aaKnown RBP11.01□□□□□ -0.65
TPM4-212ENST00000590180 PPP4R1LQ9P1A2 415 aa11.01□□□□□ -0.65
TPM4-212ENST00000590180 FAM215AQ9Y5M1 114 aa11.01□□□□□ -0.65
TPM4-212ENST00000590180 WIF1Q9Y5W5 379 aa11.01□□□□□ -0.65
TPM4-212ENST00000590180 CREBBPQ92793 2442 aa11.01□□□□□ -0.65
TPM4-212ENST00000590180 NCOA6Q14686 2063 aaPredicted RBP11□□□□□ -0.65
TPM4-212ENST00000590180 CACNA1CQ13936 2221 aa11□□□□□ -0.65
TPM4-212ENST00000590180 NCKAP5O14513 1909 aa11□□□□□ -0.65
TPM4-212ENST00000590180 C19orf84I3L1E1 186 aa11□□□□□ -0.65
TPM4-212ENST00000590180 FADS1O60427 444 aa11□□□□□ -0.65
TPM4-212ENST00000590180 C6orf47O95873 294 aa11□□□□□ -0.65
TPM4-212ENST00000590180 ALOX5P09917 674 aa11□□□□□ -0.65
TPM4-212ENST00000590180 TCEA1P23193 301 aaKnown RBP11□□□□□ -0.65
TPM4-212ENST00000590180 EVI2BP34910 448 aa11□□□□□ -0.65
TPM4-212ENST00000590180 PTGER4P35408 488 aa11□□□□□ -0.65
TPM4-212ENST00000590180 KIR3DL1P43629 444 aa11□□□□□ -0.65
TPM4-212ENST00000590180 ZFP36L2P47974 494 aaKnown RBP11□□□□□ -0.65
TPM4-212ENST00000590180 CCT3P49368 545 aaKnown RBP11□□□□□ -0.65
TPM4-212ENST00000590180 PRIM2P49643 509 aa11□□□□□ -0.65
TPM4-212ENST00000590180 PRR5P85299 388 aa11□□□□□ -0.65
TPM4-212ENST00000590180 SRYQ05066 204 aa11□□□□□ -0.65
TPM4-212ENST00000590180 CRYZQ08257 329 aaKnown RBP11□□□□□ -0.65
TPM4-212ENST00000590180 STX5Q13190 355 aa11□□□□□ -0.65
TPM4-212ENST00000590180 CASP8Q14790 479 aa11□□□□□ -0.65
TPM4-212ENST00000590180 MLC1Q15049 377 aa11□□□□□ -0.65
TPM4-212ENST00000590180 SF3B4Q15427 424 aaKnown RBP eCLIP11□□□□□ -0.654e-8■■□□□ 12.4
TPM4-212ENST00000590180 ZCCHC12Q6PEW1 402 aa11□□□□□ -0.65
TPM4-212ENST00000590180 MARCH3Q86UD3 253 aa11□□□□□ -0.65
TPM4-212ENST00000590180 PM20D2Q8IYS1 436 aa11□□□□□ -0.65
TPM4-212ENST00000590180 FBXO30Q8TB52 745 aa11□□□□□ -0.65
TPM4-212ENST00000590180 DUSP19Q8WTR2 217 aa11□□□□□ -0.65
TPM4-212ENST00000590180 COQ8BQ96D53 544 aa11□□□□□ -0.65
TPM4-212ENST00000590180 FAM120BQ96EK7 910 aaKnown RBP11□□□□□ -0.65
TPM4-212ENST00000590180 DUSP26Q9BV47 211 aa11□□□□□ -0.65
TPM4-212ENST00000590180 UGT2B28Q9BY64 529 aa11□□□□□ -0.65
TPM4-212ENST00000590180 ZCCHC3Q9NUD5 404 aaKnown RBP11□□□□□ -0.65
TPM4-212ENST00000590180 FLRT3Q9NZU0 649 aa11□□□□□ -0.65
TPM4-212ENST00000590180 MED11Q9P086 117 aa11□□□□□ -0.65
TPM4-212ENST00000590180 DKKL1Q9UK85 242 aa11□□□□□ -0.65
TPM4-212ENST00000590180 FBXL2Q9UKC9 423 aa11□□□□□ -0.65
TPM4-212ENST00000590180 PCDHGB3Q9Y5G1 929 aa11□□□□□ -0.65
TPM4-212ENST00000590180 ITPR2Q14571 2701 aa10.99□□□□□ -0.65
TPM4-212ENST00000590180 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.99□□□□□ -0.65
TPM4-212ENST00000590180 A0A0G2JNJ9 132 aa10.99□□□□□ -0.65
TPM4-212ENST00000590180 NKX2-6A6NCS4 301 aa10.99□□□□□ -0.65
TPM4-212ENST00000590180 FAM47E-STBD1D6RA91 191 aa10.99□□□□□ -0.65
TPM4-212ENST00000590180 NKX2-2O95096 273 aa10.99□□□□□ -0.65
TPM4-212ENST00000590180 UTS2O95399 124 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms