RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 CDK2AP1O14519 115 aa13.98□□□□□ -0.17
ATG4D-211ENST00000589753 TSPAN2O60636 221 aa13.98□□□□□ -0.17
ATG4D-211ENST00000589753 DNAJA2O60884 412 aa13.98□□□□□ -0.17
ATG4D-211ENST00000589753 ABCB7O75027 752 aa13.98□□□□□ -0.17
ATG4D-211ENST00000589753 STX11O75558 287 aa13.98□□□□□ -0.17
ATG4D-211ENST00000589753 ATP6V1C1P21283 382 aa13.98□□□□□ -0.17
ATG4D-211ENST00000589753 CASRP41180 1078 aa13.98□□□□□ -0.17
ATG4D-211ENST00000589753 CYB561P49447 251 aa13.98□□□□□ -0.17
ATG4D-211ENST00000589753 GSK3BP49841 420 aa13.98□□□□□ -0.17
ATG4D-211ENST00000589753 ST13P50502 369 aaKnown RBP13.98□□□□□ -0.17
ATG4D-211ENST00000589753 HLCSP50747 726 aa13.98□□□□□ -0.17
ATG4D-211ENST00000589753 CRISP3P54108 245 aa13.98□□□□□ -0.17
ATG4D-211ENST00000589753 POLE2P56282 527 aa13.98□□□□□ -0.17
ATG4D-211ENST00000589753 NCALDP61601 193 aa13.98□□□□□ -0.17
ATG4D-211ENST00000589753 CDK6Q00534 326 aa13.98□□□□□ -0.17
ATG4D-211ENST00000589753 RBBP4Q09028 425 aa13.98□□□□□ -0.17
ATG4D-211ENST00000589753 SCARB2Q14108 478 aa13.98□□□□□ -0.17
ATG4D-211ENST00000589753 MAPK11Q15759 364 aa13.98□□□□□ -0.17
ATG4D-211ENST00000589753 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.98□□□□□ -0.17
ATG4D-211ENST00000589753 ZNF791Q3KP31 576 aaPredicted RBP13.98□□□□□ -0.17
ATG4D-211ENST00000589753 LACTB2Q53H82 288 aaPredicted RBP13.98□□□□□ -0.17
ATG4D-211ENST00000589753 SAMD4BQ5PRF9 694 aaKnown RBP13.98□□□□□ -0.17
ATG4D-211ENST00000589753 ZNF468Q5VIY5 522 aaPredicted RBP13.98□□□□□ -0.17
ATG4D-211ENST00000589753 ERICH5Q6P6B1 374 aa13.98□□□□□ -0.17
ATG4D-211ENST00000589753 IL20RBQ6UXL0 311 aa13.98□□□□□ -0.17
ATG4D-211ENST00000589753 GPALPP1Q8IXQ4 340 aa13.98□□□□□ -0.17
ATG4D-211ENST00000589753 ZZZ3Q8IYH5 903 aa13.98□□□□□ -0.17
ATG4D-211ENST00000589753 ARHGAP24Q8N264 748 aa13.98□□□□□ -0.17
ATG4D-211ENST00000589753 METTL25Q8N6Q8 603 aa13.98□□□□□ -0.17
ATG4D-211ENST00000589753 RNF148Q8N7C7 305 aa13.98□□□□□ -0.17
ATG4D-211ENST00000589753 C11orf65Q8NCR3 313 aa13.98□□□□□ -0.17
ATG4D-211ENST00000589753 NFKBIDQ8NI38 313 aa13.98□□□□□ -0.17
ATG4D-211ENST00000589753 TMEM19Q96HH6 336 aa13.98□□□□□ -0.17
ATG4D-211ENST00000589753 COL21A1Q96P44 957 aa13.98□□□□□ -0.17
ATG4D-211ENST00000589753 ADOQ96SZ5 270 aa13.98□□□□□ -0.17
ATG4D-211ENST00000589753 KCTD14Q9BQ13 255 aaPredicted RBP13.98□□□□□ -0.17
ATG4D-211ENST00000589753 UTP23Q9BRU9 249 aaKnown RBP13.98□□□□□ -0.17
ATG4D-211ENST00000589753 ZNF350Q9GZX5 532 aa13.98□□□□□ -0.17
ATG4D-211ENST00000589753 POLE3Q9NRF9 147 aa13.98□□□□□ -0.17
ATG4D-211ENST00000589753 FBXO34Q9NWN3 711 aa13.98□□□□□ -0.17
ATG4D-211ENST00000589753 HPF1Q9NWY4 346 aa13.98□□□□□ -0.17
ATG4D-211ENST00000589753 ANKRD10Q9NXR5 420 aa13.98□□□□□ -0.17
ATG4D-211ENST00000589753 CALML5Q9NZT1 146 aa13.98□□□□□ -0.17
ATG4D-211ENST00000589753 PACSIN3Q9UKS6 424 aa13.98□□□□□ -0.17
ATG4D-211ENST00000589753 PRPF19Q9UMS4 504 aaKnown RBP13.98□□□□□ -0.17
ATG4D-211ENST00000589753 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.98□□□□□ -0.17
ATG4D-211ENST00000589753 IGF2RP11717 2491 aa13.98□□□□□ -0.17
ATG4D-211ENST00000589753 CPAMD8Q8IZJ3 1885 aa13.97□□□□□ -0.17
ATG4D-211ENST00000589753 PRORSD1PA6NEY8 169 aa13.97□□□□□ -0.17
ATG4D-211ENST00000589753 HS6ST1O60243 411 aa13.97□□□□□ -0.17
ATG4D-211ENST00000589753 FCMRO60667 390 aa13.97□□□□□ -0.17
ATG4D-211ENST00000589753 UGT2B11O75310 529 aa13.97□□□□□ -0.17
ATG4D-211ENST00000589753 DNAJC8O75937 253 aaPredicted RBP13.97□□□□□ -0.17
ATG4D-211ENST00000589753 H6PDO95479 791 aa13.97□□□□□ -0.17
ATG4D-211ENST00000589753 WDPCPO95876 746 aa13.97□□□□□ -0.17
ATG4D-211ENST00000589753 CHRM4P08173 479 aa13.97□□□□□ -0.17
ATG4D-211ENST00000589753 GUSBP08236 651 aa13.97□□□□□ -0.17
ATG4D-211ENST00000589753 LCN1P31025 176 aa13.97□□□□□ -0.17
ATG4D-211ENST00000589753 CD96P40200 585 aa13.97□□□□□ -0.17
ATG4D-211ENST00000589753 FBXW4P57775 412 aa13.97□□□□□ -0.17
ATG4D-211ENST00000589753 OC90Q02509 493 aaPredicted RBP13.97□□□□□ -0.17
ATG4D-211ENST00000589753 TUBA3CQ13748 450 aa13.97□□□□□ -0.17
ATG4D-211ENST00000589753 EFR3AQ14156 821 aa13.97□□□□□ -0.17
ATG4D-211ENST00000589753 NTRK2Q16620 822 aa13.97□□□□□ -0.17
ATG4D-211ENST00000589753 ZSCAN26Q16670 478 aa13.97□□□□□ -0.17
ATG4D-211ENST00000589753 VMACQ2NL98 169 aa13.97□□□□□ -0.17
ATG4D-211ENST00000589753 SPATS1Q496A3 300 aa13.97□□□□□ -0.17
ATG4D-211ENST00000589753 TUBA3EQ6PEY2 450 aa13.97□□□□□ -0.17
ATG4D-211ENST00000589753 C19orf48Q6RUI8 117 aa13.97□□□□□ -0.17
ATG4D-211ENST00000589753 IGFL2Q6UWQ7 119 aa13.97□□□□□ -0.17
ATG4D-211ENST00000589753 LRRC74BQ6ZQY2 392 aa13.97□□□□□ -0.17
ATG4D-211ENST00000589753 OLIG3Q7RTU3 272 aa13.97□□□□□ -0.17
ATG4D-211ENST00000589753 NUP54Q7Z3B4 507 aa13.97□□□□□ -0.17
ATG4D-211ENST00000589753 YTHDF3Q7Z739 585 aaKnown RBP13.97□□□□□ -0.17
ATG4D-211ENST00000589753 SLC30A8Q8IWU4 369 aa13.97□□□□□ -0.17
ATG4D-211ENST00000589753 MICU2Q8IYU8 434 aa13.97□□□□□ -0.17
ATG4D-211ENST00000589753 FAM13CQ8NE31 585 aa13.97□□□□□ -0.17
ATG4D-211ENST00000589753 OR5M3Q8NGP4 307 aa13.97□□□□□ -0.17
ATG4D-211ENST00000589753 THTPAQ9BU02 230 aa13.97□□□□□ -0.17
ATG4D-211ENST00000589753 RNF32Q9H0A6 362 aa13.97□□□□□ -0.17
ATG4D-211ENST00000589753 LRMDAQ9H2I8 198 aa13.97□□□□□ -0.17
ATG4D-211ENST00000589753 RUBCNLQ9H714 662 aa13.97□□□□□ -0.17
ATG4D-211ENST00000589753 PLA2G3Q9NZ20 509 aa13.97□□□□□ -0.17
ATG4D-211ENST00000589753 GMPR2Q9P2T1 348 aaKnown RBP13.97□□□□□ -0.17
ATG4D-211ENST00000589753 CD300AQ9UGN4 299 aa13.97□□□□□ -0.17
ATG4D-211ENST00000589753 USP22Q9UPT9 525 aa13.97□□□□□ -0.17
ATG4D-211ENST00000589753 ANGPT4Q9Y264 503 aa13.97□□□□□ -0.17
ATG4D-211ENST00000589753 WDR45Q9Y484 360 aa13.97□□□□□ -0.17
ATG4D-211ENST00000589753 ZNF451Q9Y4E5 1061 aa13.97□□□□□ -0.17
ATG4D-211ENST00000589753 DOCK10Q96BY6 2186 aa13.97□□□□□ -0.17
ATG4D-211ENST00000589753 MED13Q9UHV7 2174 aa13.96□□□□□ -0.17
ATG4D-211ENST00000589753 ELOVL7A1L3X0 281 aa13.96□□□□□ -0.17
ATG4D-211ENST00000589753 TP53I11O14683 189 aa13.96□□□□□ -0.17
ATG4D-211ENST00000589753 F10P00742 488 aa13.96□□□□□ -0.17
ATG4D-211ENST00000589753 CYP4B1P13584 511 aa13.96□□□□□ -0.17
ATG4D-211ENST00000589753 HSD17B1P14061 328 aa13.96□□□□□ -0.17
ATG4D-211ENST00000589753 PCGF2P35227 344 aa13.96□□□□□ -0.17
ATG4D-211ENST00000589753 ARG2P78540 354 aa13.96□□□□□ -0.17
ATG4D-211ENST00000589753 CHRNEQ04844 493 aa13.96□□□□□ -0.17
ATG4D-211ENST00000589753 CEACAM7Q14002 265 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms