RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	CD1C	P29017	333 aa		14.41	□□□□□ -0.1
DDX39A-209	ENST00000589318	TLX1	P31314	330 aa	Predicted RBP	14.41	□□□□□ -0.1
DDX39A-209	ENST00000589318	KCNJ10	P78508	379 aa		14.41	□□□□□ -0.1
DDX39A-209	ENST00000589318	GPLD1	P80108	840 aa		14.41	□□□□□ -0.1
DDX39A-209	ENST00000589318	SHC2	P98077	582 aa		14.41	□□□□□ -0.1
DDX39A-209	ENST00000589318	VLDLR	P98155	873 aa		14.41	□□□□□ -0.1
DDX39A-209	ENST00000589318	CDK5R2	Q13319	367 aa		14.41	□□□□□ -0.1
DDX39A-209	ENST00000589318	NPTX1	Q15818	432 aa		14.41	□□□□□ -0.1
DDX39A-209	ENST00000589318	CRB2	Q5IJ48	1285 aa		14.41	□□□□□ -0.1
DDX39A-209	ENST00000589318	USP53	Q70EK8	1073 aa		14.41	□□□□□ -0.1
DDX39A-209	ENST00000589318	ZDHHC21	Q8IVQ6	265 aa		14.41	□□□□□ -0.1
DDX39A-209	ENST00000589318	OR4N5	Q8IXE1	308 aa		14.41	□□□□□ -0.1
DDX39A-209	ENST00000589318	LRRC25	Q8N386	305 aa	Predicted RBP	14.41	□□□□□ -0.1
DDX39A-209	ENST00000589318	ESX1	Q8N693	406 aa		14.41	□□□□□ -0.1
DDX39A-209	ENST00000589318	GALNT6	Q8NCL4	622 aa		14.41	□□□□□ -0.1
DDX39A-209	ENST00000589318	OR4K14	Q8NGD5	310 aa		14.41	□□□□□ -0.1
DDX39A-209	ENST00000589318	SLC38A5	Q8WUX1	472 aa		14.41	□□□□□ -0.1
DDX39A-209	ENST00000589318	IPCEF1	Q8WWN9	437 aa	Predicted RBP	14.41	□□□□□ -0.1
DDX39A-209	ENST00000589318	RAB8B	Q92930	207 aa		14.41	□□□□□ -0.1
DDX39A-209	ENST00000589318	TMCO6	Q96DC7	493 aa		14.41	□□□□□ -0.1
DDX39A-209	ENST00000589318	AHCYL2	Q96HN2	611 aa	Known RBP	14.41	□□□□□ -0.1
DDX39A-209	ENST00000589318	SLC35G5	Q96KT7	338 aa		14.41	□□□□□ -0.1
DDX39A-209	ENST00000589318	C7orf34	Q96L11	122 aa		14.41	□□□□□ -0.1
DDX39A-209	ENST00000589318	ANKRA2	Q9H9E1	313 aa		14.41	□□□□□ -0.1
DDX39A-209	ENST00000589318	CAPN10	Q9HC96	672 aa		14.41	□□□□□ -0.1
DDX39A-209	ENST00000589318	PDE7B	Q9NP56	450 aa		14.41	□□□□□ -0.1
DDX39A-209	ENST00000589318	SOHLH2	Q9NX45	425 aa		14.41	□□□□□ -0.1
DDX39A-209	ENST00000589318	ABCG2	Q9UNQ0	655 aa		14.41	□□□□□ -0.1
DDX39A-209	ENST00000589318	ZSCAN5B	A6NJL1	495 aa		14.4	□□□□□ -0.1
DDX39A-209	ENST00000589318	FAM227A	F5H4B4	570 aa		14.4	□□□□□ -0.1
DDX39A-209	ENST00000589318	SHOX	O15266	292 aa		14.4	□□□□□ -0.1
DDX39A-209	ENST00000589318	DUX1	O43812	170 aa		14.4	□□□□□ -0.1
DDX39A-209	ENST00000589318	FGF17	O60258	216 aa		14.4	□□□□□ -0.1
DDX39A-209	ENST00000589318	ANGPTL1	O95841	491 aa		14.4	□□□□□ -0.1
DDX39A-209	ENST00000589318	OPN1SW	P03999	348 aa		14.4	□□□□□ -0.1
DDX39A-209	ENST00000589318	FH	P07954	510 aa		14.4	□□□□□ -0.1
DDX39A-209	ENST00000589318	MC3R	P41968	323 aa		14.4	□□□□□ -0.1
DDX39A-209	ENST00000589318	PPM1F	P49593	454 aa	Predicted RBP	14.4	□□□□□ -0.1
DDX39A-209	ENST00000589318	XK	P51811	444 aa		14.4	□□□□□ -0.1
DDX39A-209	ENST00000589318	AP2S1	P53680	142 aa	Predicted RBP	14.4	□□□□□ -0.1
DDX39A-209	ENST00000589318	SELENOW	P63302	87 aa		14.4	□□□□□ -0.1
DDX39A-209	ENST00000589318	CSNK2B	P67870	215 aa		14.4	□□□□□ -0.1
DDX39A-209	ENST00000589318	KCNAB2	Q13303	367 aa		14.4	□□□□□ -0.1
DDX39A-209	ENST00000589318	AMZ1	Q400G9	498 aa		14.4	□□□□□ -0.1
DDX39A-209	ENST00000589318	CDON	Q4KMG0	1287 aa		14.4	□□□□□ -0.1
DDX39A-209	ENST00000589318	YIF1B	Q5BJH7	314 aa		14.4	□□□□□ -0.1
DDX39A-209	ENST00000589318	GDPD3	Q7L5L3	318 aa		14.4	□□□□□ -0.1
DDX39A-209	ENST00000589318	CARF	Q8N187	725 aa		14.4	□□□□□ -0.1
DDX39A-209	ENST00000589318	OR5D16	Q8NGK9	328 aa		14.4	□□□□□ -0.1
DDX39A-209	ENST00000589318	OR4C6	Q8NH72	309 aa		14.4	□□□□□ -0.1
DDX39A-209	ENST00000589318	RSPO3	Q9BXY4	272 aa	Predicted RBP	14.4	□□□□□ -0.1
DDX39A-209	ENST00000589318	AMBRA1	Q9C0C7	1298 aa		14.4	□□□□□ -0.1
DDX39A-209	ENST00000589318	DCSTAMP	Q9H295	470 aa		14.4	□□□□□ -0.1
DDX39A-209	ENST00000589318	OR51I1	Q9H343	314 aa		14.4	□□□□□ -0.1
DDX39A-209	ENST00000589318	PCDHGA10	Q9Y5H3	936 aa		14.4	□□□□□ -0.1
DDX39A-209	ENST00000589318	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318		A0A0A6YYC8	382 aa	Predicted RBP	14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	FITM1	A5D6W6	292 aa		14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	HMX3	A6NHT5	357 aa		14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	PATE3	B3GLJ2	98 aa		14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	PTGES3L	E9PB15	166 aa		14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318		I3L1I5	382 aa	Predicted RBP	14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	SUV39H1	O43463	412 aa		14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	MTRF1	O75570	445 aa	Known RBP	14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	HMGN2	P05204	90 aa	Known RBP	14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	RPS5	P46782	204 aa	Known RBP	14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	RAB38	P57729	211 aa		14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	SLC35A2	P78381	396 aa		14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	TARDBP	Q13148	414 aa	Known RBP eCLIP	14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	ELOA	Q14241	798 aa	Known RBP	14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	KCNAB1	Q14722	419 aa		14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	LAIR2	Q6ISS4	152 aa		14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	REEP3	Q6NUK4	255 aa		14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	SZRD1	Q7Z422	152 aa		14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	TSEN54	Q7Z6J9	526 aa	Known RBP	14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	SLC30A8	Q8IWU4	369 aa		14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	SAMD14	Q8IZD0	417 aa	Predicted RBP	14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	FAM109A	Q8N4B1	249 aa		14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	KBTBD8	Q8NFY9	601 aa		14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	OR5K1	Q8NHB7	308 aa		14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	SGCD	Q92629	289 aa		14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	KAT2A	Q92830	837 aa		14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	CCDC74A	Q96AQ1	378 aa		14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	GIMAP5	Q96F15	307 aa		14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	TMEM19	Q96HH6	336 aa		14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	COQ7	Q99807	217 aa		14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	DOHH	Q9BU89	302 aa		14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	DUSP23	Q9BVJ7	150 aa		14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	RPRD1B	Q9NQG5	326 aa	Known RBP	14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	ENAM	Q9NRM1	1142 aa		14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	ADPRHL2	Q9NX46	363 aa		14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	VNN3	Q9NY84	501 aa		14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	NTM	Q9P121	344 aa		14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	ANGPT4	Q9Y264	503 aa		14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	MAGED1	Q9Y5V3	778 aa	Predicted RBP	14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	EMC8	O43402	210 aa		14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	CHST10	O43529	356 aa		14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	LDB3	O75112	727 aa		14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	CFI	P05156	583 aa		14.39	□□□□□ -0.11
DDX39A-209	ENST00000589318	BCHE	P06276	602 aa		14.39	□□□□□ -0.11

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms