RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 AP3D1O14617 1153 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 SOX30O94993 753 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 OR5F1O95221 314 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 EPPINO95925 133 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 ATP1B1P05026 303 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 LCKP06239 509 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 POU2F1P14859 743 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 PORP16435 677 aaPredicted RBP9.3□□□□□ -0.92
VPS25-202ENST00000589219 CD36P16671 472 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 POU1F1P28069 291 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 UGT2B10P36537 528 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 SLC15A1P46059 708 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 RAB38P57729 211 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 TAS2R41P59536 307 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 ARF3P61204 181 aaPredicted RBP9.3□□□□□ -0.92
VPS25-202ENST00000589219 SIM1P81133 766 aaPredicted RBP9.3□□□□□ -0.92
VPS25-202ENST00000589219 ST3GAL3Q11203 375 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 TARDBPQ13148 414 aaKnown RBP eCLIP9.3□□□□□ -0.92
VPS25-202ENST00000589219 RUNX2Q13950 521 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 ZNF846Q147U1 533 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 LARS2Q15031 903 aaKnown RBP9.3□□□□□ -0.92
VPS25-202ENST00000589219 TRAM2Q15035 370 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 OCLNQ16625 522 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 TIGD6Q17RP2 521 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 ARHGAP11BQ3KRB8 267 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 TIMM50Q3ZCQ8 353 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 ENTPD8Q5MY95 495 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 EXOSC6Q5RKV6 272 aaKnown RBP9.3□□□□□ -0.92
VPS25-202ENST00000589219 C1orf94Q6P1W5 598 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 PODNL1Q6PEZ8 512 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 KLHL35Q6PF15 583 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 FRRS1Q6ZNA5 592 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 SLC46A3Q7Z3Q1 461 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 COMTD1Q86VU5 262 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 RBM45Q8IUH3 476 aaKnown RBP9.3□□□□□ -0.92
VPS25-202ENST00000589219 PEX5LQ8IYB4 626 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 MORN4Q8NDC4 146 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 KBTBD8Q8NFY9 601 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 OR7G2Q8NG99 324 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 OR4K5Q8NGD3 323 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 OR6T1Q8NGN1 323 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 SLC7A13Q8TCU3 470 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 GNPDA2Q8TDQ7 276 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 DNASE2BQ8WZ79 361 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 KAT2AQ92830 837 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 PMM1Q92871 262 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 UBE2FQ969M7 185 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 OTUB1Q96FW1 271 aaPredicted RBP9.3□□□□□ -0.92
VPS25-202ENST00000589219 VMP1Q96GC9 406 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 C16orf58Q96GQ5 468 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 STACQ99469 402 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 GPR174Q9BXC1 333 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 POLDIP3Q9BY77 421 aaKnown RBP9.3□□□□□ -0.92
VPS25-202ENST00000589219 SEMA6CQ9H3T2 930 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 UCK1Q9HA47 277 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 HMG20AQ9NP66 347 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 KRCC1Q9NPI7 259 aaPredicted RBP9.3□□□□□ -0.92
VPS25-202ENST00000589219 MAN2C1Q9NTJ4 1040 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 EVA1BQ9NVM1 165 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 HRASLS2Q9NWW9 162 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 C19orf53Q9UNZ5 99 aaPredicted RBP9.3□□□□□ -0.92
VPS25-202ENST00000589219 ZNF443Q9Y2A4 671 aaPredicted RBP9.3□□□□□ -0.92
VPS25-202ENST00000589219 B3GNT3Q9Y2A9 372 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 HEMK1Q9Y5R4 338 aaPredicted RBP9.3□□□□□ -0.92
VPS25-202ENST00000589219 CEP295Q9C0D2 2601 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 USP24Q9UPU5 2620 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 FRYQ5TBA9 3013 aa9.29□□□□□ -0.92
VPS25-202ENST00000589219 HEATR5BQ9P2D3 2071 aa9.29□□□□□ -0.92
VPS25-202ENST00000589219 A0A1W2PS29 197 aa9.29□□□□□ -0.92
VPS25-202ENST00000589219 MAN1A2O60476 641 aa9.29□□□□□ -0.92
VPS25-202ENST00000589219 PLOD3O60568 738 aa9.29□□□□□ -0.92
VPS25-202ENST00000589219 GALR3O60755 368 aaPredicted RBP9.29□□□□□ -0.92
VPS25-202ENST00000589219 COQ9O75208 318 aa9.29□□□□□ -0.92
VPS25-202ENST00000589219 ALOX5P09917 674 aa9.29□□□□□ -0.92
VPS25-202ENST00000589219 CCNYL3P0C7X3 344 aa9.29□□□□□ -0.92
VPS25-202ENST00000589219 ACP2P11117 423 aa9.29□□□□□ -0.92
VPS25-202ENST00000589219 RPS4Y1P22090 263 aaKnown RBP9.29□□□□□ -0.92
VPS25-202ENST00000589219 PTGER1P34995 402 aa9.29□□□□□ -0.92
VPS25-202ENST00000589219 SMSP52788 366 aa9.29□□□□□ -0.92
VPS25-202ENST00000589219 PDX1P52945 283 aa9.29□□□□□ -0.92
VPS25-202ENST00000589219 NUDT6P53370 316 aa9.29□□□□□ -0.92
VPS25-202ENST00000589219 C21orf59P57076 290 aa9.29□□□□□ -0.92
VPS25-202ENST00000589219 RGS8P57771 180 aaPredicted RBP9.29□□□□□ -0.92
VPS25-202ENST00000589219 TUBA1BP68363 451 aa9.29□□□□□ -0.92
VPS25-202ENST00000589219 HHEXQ03014 270 aa9.29□□□□□ -0.92
VPS25-202ENST00000589219 CHRNEQ04844 493 aa9.29□□□□□ -0.92
VPS25-202ENST00000589219 ST3GAL4Q11206 333 aa9.29□□□□□ -0.92
VPS25-202ENST00000589219 PIN1Q13526 163 aaPredicted RBP9.29□□□□□ -0.92
VPS25-202ENST00000589219 TMEM44Q2T9K0 475 aa9.29□□□□□ -0.92
VPS25-202ENST00000589219 INAVAQ3KP66 663 aa9.29□□□□□ -0.92
VPS25-202ENST00000589219 SLC25A30Q5SVS4 291 aa9.29□□□□□ -0.92
VPS25-202ENST00000589219 FHL5Q5TD97 284 aa9.29□□□□□ -0.92
VPS25-202ENST00000589219 MFSD4BQ5TF39 518 aa9.29□□□□□ -0.92
VPS25-202ENST00000589219 RNLSQ5VYX0 342 aa9.29□□□□□ -0.92
VPS25-202ENST00000589219 PLEKHM3Q6ZWE6 761 aa9.29□□□□□ -0.92
VPS25-202ENST00000589219 USP43Q70EL4 1123 aa9.29□□□□□ -0.92
VPS25-202ENST00000589219 TUBA1AQ71U36 451 aa9.29□□□□□ -0.92
VPS25-202ENST00000589219 ADCK1Q86TW2 530 aa9.29□□□□□ -0.92
VPS25-202ENST00000589219 SLCO6A1Q86UG4 719 aa9.29□□□□□ -0.92
VPS25-202ENST00000589219 IQCHQ86VS3 1027 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms