RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 KCNK2O95069 426 aa20.9■□□□□ 0.94
ACTN4-210ENST00000588618 H6PDO95479 791 aa20.9■□□□□ 0.94
ACTN4-210ENST00000588618 CHRM4P08173 479 aa20.9■□□□□ 0.94
ACTN4-210ENST00000588618 IL12BP29460 328 aa20.9■□□□□ 0.94
ACTN4-210ENST00000588618 PLCXD2Q0VAA5 305 aa20.9■□□□□ 0.94
ACTN4-210ENST00000588618 TRAP1Q12931 704 aaKnown RBP20.9■□□□□ 0.94
ACTN4-210ENST00000588618 FLOT2Q14254 428 aa20.9■□□□□ 0.94
ACTN4-210ENST00000588618 BROXQ5VW32 411 aa20.9■□□□□ 0.94
ACTN4-210ENST00000588618 TCTN3Q6NUS6 607 aa20.9■□□□□ 0.94
ACTN4-210ENST00000588618 JMJD6Q6NYC1 403 aaPredicted RBP20.9■□□□□ 0.94
ACTN4-210ENST00000588618 CCDC81Q6ZN84 652 aa20.9■□□□□ 0.94
ACTN4-210ENST00000588618 C16orf47Q6ZP98 133 aaPredicted RBP20.9■□□□□ 0.94
ACTN4-210ENST00000588618 KRT73Q86Y46 540 aa20.9■□□□□ 0.94
ACTN4-210ENST00000588618 ZNF441Q8N8Z8 693 aa20.9■□□□□ 0.94
ACTN4-210ENST00000588618 TREX2Q9BQ50 279 aaPredicted RBP20.9■□□□□ 0.94
ACTN4-210ENST00000588618 ACTR3BQ9P1U1 418 aa20.9■□□□□ 0.94
ACTN4-210ENST00000588618 WDR45Q9Y484 360 aa20.9■□□□□ 0.94
ACTN4-210ENST00000588618 PDE9AO76083 593 aa20.9■□□□□ 0.94
ACTN4-210ENST00000588618 EIF2S3P41091 472 aaKnown RBP20.9■□□□□ 0.94
ACTN4-210ENST00000588618 Q0VFX4 171 aa20.9■□□□□ 0.94
ACTN4-210ENST00000588618 KPNB1Q14974 876 aaKnown RBP20.9■□□□□ 0.94
ACTN4-210ENST00000588618 LRRC74BQ6ZQY2 392 aa20.9■□□□□ 0.94
ACTN4-210ENST00000588618 SPACA3Q8IXA5 215 aa20.9■□□□□ 0.94
ACTN4-210ENST00000588618 BCORP1Q8N888 145 aa20.9■□□□□ 0.94
ACTN4-210ENST00000588618 BBS10Q8TAM1 723 aa20.9■□□□□ 0.94
ACTN4-210ENST00000588618 TMBIM1Q969X1 311 aa20.9■□□□□ 0.94
ACTN4-210ENST00000588618 ZNF607Q96SK3 696 aa20.9■□□□□ 0.94
ACTN4-210ENST00000588618 SDF2Q99470 211 aa20.9■□□□□ 0.94
ACTN4-210ENST00000588618 TEKT2Q9UIF3 430 aa20.9■□□□□ 0.94
ACTN4-210ENST00000588618 TO15178 435 aa20.89■□□□□ 0.93
ACTN4-210ENST00000588618 PGM3O95394 542 aa20.89■□□□□ 0.93
ACTN4-210ENST00000588618 PCBP3P57721 371 aaKnown RBP20.89■□□□□ 0.93
ACTN4-210ENST00000588618 LRRC23Q53EV4 343 aaPredicted RBP20.89■□□□□ 0.93
ACTN4-210ENST00000588618 PRAMEF8Q5VWM4 474 aa20.89■□□□□ 0.93
ACTN4-210ENST00000588618 PRAMEF7Q5VXH5 474 aa20.89■□□□□ 0.93
ACTN4-210ENST00000588618 LCN8Q6JVE9 175 aa20.89■□□□□ 0.93
ACTN4-210ENST00000588618 ERMP1Q7Z2K6 904 aa20.89■□□□□ 0.93
ACTN4-210ENST00000588618 RPS19BP1Q86WX3 136 aaKnown RBP20.89■□□□□ 0.93
ACTN4-210ENST00000588618 SLC34A3Q8N130 599 aa20.89■□□□□ 0.93
ACTN4-210ENST00000588618 BRIX1Q8TDN6 353 aaKnown RBP20.89■□□□□ 0.93
ACTN4-210ENST00000588618 SLC26A7Q8TE54 656 aa20.89■□□□□ 0.93
ACTN4-210ENST00000588618 NSMCE2Q96MF7 247 aa20.89■□□□□ 0.93
ACTN4-210ENST00000588618 RSPO3Q9BXY4 272 aaPredicted RBP20.89■□□□□ 0.93
ACTN4-210ENST00000588618 RRP15Q9Y3B9 282 aaKnown RBP20.89■□□□□ 0.93
ACTN4-210ENST00000588618 NINQ8N4C6 2090 aa20.89■□□□□ 0.93
ACTN4-210ENST00000588618 IGF2RP11717 2491 aa20.88■□□□□ 0.93
ACTN4-210ENST00000588618 A0A0G2JPF8 293 aa20.88■□□□□ 0.93
ACTN4-210ENST00000588618 HNRNPCL2B2RXH8 293 aa20.88■□□□□ 0.93
ACTN4-210ENST00000588618 HNRNPCL3B7ZW38 293 aa20.88■□□□□ 0.93
ACTN4-210ENST00000588618 EFSO43281 561 aa20.88■□□□□ 0.93
ACTN4-210ENST00000588618 REM1O75628 298 aa20.88■□□□□ 0.93
ACTN4-210ENST00000588618 OR2J2O76002 312 aa20.88■□□□□ 0.93
ACTN4-210ENST00000588618 IFNA14P01570 189 aa20.88■□□□□ 0.93
ACTN4-210ENST00000588618 IGKV1D-16P01601 117 aa20.88■□□□□ 0.93
ACTN4-210ENST00000588618 HNRNPCL4P0DMR1 293 aa20.88■□□□□ 0.93
ACTN4-210ENST00000588618 ABCD3P28288 659 aa20.88■□□□□ 0.93
ACTN4-210ENST00000588618 TMED10P49755 219 aaKnown RBP20.88■□□□□ 0.93
ACTN4-210ENST00000588618 POLE2P56282 527 aa20.88■□□□□ 0.93
ACTN4-210ENST00000588618 CCNIQ14094 377 aa20.88■□□□□ 0.93
ACTN4-210ENST00000588618 ZAR1Q86SH2 424 aa20.88■□□□□ 0.93
ACTN4-210ENST00000588618 PATL1Q86TB9 770 aaKnown RBP20.88■□□□□ 0.93
ACTN4-210ENST00000588618 PRR22Q8IZ63 422 aa20.88■□□□□ 0.93
ACTN4-210ENST00000588618 SIRT6Q8N6T7 355 aa20.88■□□□□ 0.93
ACTN4-210ENST00000588618 ZNF350Q9GZX5 532 aa20.88■□□□□ 0.93
ACTN4-210ENST00000588618 LHPPQ9H008 270 aa20.88■□□□□ 0.93
ACTN4-210ENST00000588618 SLC38A1Q9H2H9 487 aa20.88■□□□□ 0.93
ACTN4-210ENST00000588618 CDCP1Q9H5V8 836 aa20.88■□□□□ 0.93
ACTN4-210ENST00000588618 POLE3Q9NRF9 147 aa20.88■□□□□ 0.93
ACTN4-210ENST00000588618 MKLN1Q9UL63 735 aa20.88■□□□□ 0.93
ACTN4-210ENST00000588618 HS6ST1O60243 411 aa20.87■□□□□ 0.93
ACTN4-210ENST00000588618 FCMRO60667 390 aa20.87■□□□□ 0.93
ACTN4-210ENST00000588618 ZNF354AO60765 605 aaPredicted RBP20.87■□□□□ 0.93
ACTN4-210ENST00000588618 ITGA10O75578 1167 aa20.87■□□□□ 0.93
ACTN4-210ENST00000588618 SERPINB7O75635 380 aa20.87■□□□□ 0.93
ACTN4-210ENST00000588618 CHRNEQ04844 493 aa20.87■□□□□ 0.93
ACTN4-210ENST00000588618 CHAF1BQ13112 559 aa20.87■□□□□ 0.93
ACTN4-210ENST00000588618 GPR68Q15743 365 aa20.87■□□□□ 0.93
ACTN4-210ENST00000588618 FLYWCH1Q4VC44 716 aa20.87■□□□□ 0.93
ACTN4-210ENST00000588618 SPPL2CQ8IUH8 684 aa20.87■□□□□ 0.93
ACTN4-210ENST00000588618 BHLHE22Q8NFJ8 381 aaPredicted RBP20.87■□□□□ 0.93
ACTN4-210ENST00000588618 EFHD2Q96C19 240 aaPredicted RBP20.87■□□□□ 0.93
ACTN4-210ENST00000588618 OMA1Q96E52 524 aa20.87■□□□□ 0.93
ACTN4-210ENST00000588618 SPATA5L1Q9BVQ7 753 aa20.87■□□□□ 0.93
ACTN4-210ENST00000588618 ING2Q9H160 280 aa20.87■□□□□ 0.93
ACTN4-210ENST00000588618 TRIM45Q9H8W5 580 aaPredicted RBP20.87■□□□□ 0.93
ACTN4-210ENST00000588618 GORASP2Q9H8Y8 452 aa20.87■□□□□ 0.93
ACTN4-210ENST00000588618 BCL2L10Q9HD36 194 aa20.87■□□□□ 0.93
ACTN4-210ENST00000588618 YARS2Q9Y2Z4 477 aaKnown RBP20.87■□□□□ 0.93
ACTN4-210ENST00000588618 NPFFR2Q9Y5X5 522 aa20.87■□□□□ 0.93
ACTN4-210ENST00000588618 KDELR2P33947 212 aa20.87■□□□□ 0.93
ACTN4-210ENST00000588618 ACTR3P61158 418 aa20.87■□□□□ 0.93
ACTN4-210ENST00000588618 DMTNQ08495 405 aa20.87■□□□□ 0.93
ACTN4-210ENST00000588618 FCRLBQ6BAA4 426 aa20.87■□□□□ 0.93
ACTN4-210ENST00000588618 HMGN2P46Q86SG4 172 aa20.87■□□□□ 0.93
ACTN4-210ENST00000588618 SLC15A4Q8N697 577 aa20.87■□□□□ 0.93
ACTN4-210ENST00000588618 SPPL2AQ8TCT8 520 aa20.87■□□□□ 0.93
ACTN4-210ENST00000588618 DIO2Q92813 273 aa20.87■□□□□ 0.93
ACTN4-210ENST00000588618 MTHFD2LQ9H903 347 aaPredicted RBP20.87■□□□□ 0.93
ACTN4-210ENST00000588618 MED19A0JLT2 244 aaPredicted RBP20.86■□□□□ 0.93
ACTN4-210ENST00000588618 TMEM229AB2RXF0 380 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms