RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 PNLIPRP2P54317 469 aa12.39□□□□□ -0.43
HDAC5-208ENST00000588419 TPD52P55327 224 aaPredicted RBP12.39□□□□□ -0.43
HDAC5-208ENST00000588419 DSCR4P56555 118 aaPredicted RBP12.39□□□□□ -0.43
HDAC5-208ENST00000588419 MRPS22P82650 360 aaKnown RBP12.39□□□□□ -0.43
HDAC5-208ENST00000588419 C2orf80Q0P641 193 aa12.39□□□□□ -0.43
HDAC5-208ENST00000588419 WHAMMP3Q1A5X7 153 aa12.39□□□□□ -0.43
HDAC5-208ENST00000588419 Q5PR19 223 aa12.39□□□□□ -0.43
HDAC5-208ENST00000588419 LGSNQ5TDP6 509 aa12.39□□□□□ -0.43
HDAC5-208ENST00000588419 CLEC9AQ6UXN8 241 aa12.39□□□□□ -0.43
HDAC5-208ENST00000588419 ZNF550Q7Z398 422 aa12.39□□□□□ -0.43
HDAC5-208ENST00000588419 BIVMQ86UB2 503 aa12.39□□□□□ -0.43
HDAC5-208ENST00000588419 RELL1Q8IUW5 271 aa12.39□□□□□ -0.43
HDAC5-208ENST00000588419 SAMD14Q8IZD0 417 aaPredicted RBP12.39□□□□□ -0.43
HDAC5-208ENST00000588419 GBP7Q8N8V2 638 aaPredicted RBP12.39□□□□□ -0.43
HDAC5-208ENST00000588419 FIG4Q92562 907 aa12.39□□□□□ -0.43
HDAC5-208ENST00000588419 PGM2Q96G03 612 aa12.39□□□□□ -0.43
HDAC5-208ENST00000588419 TSPYL1Q9H0U9 437 aa12.39□□□□□ -0.43
HDAC5-208ENST00000588419 NFU1Q9UMS0 254 aa12.39□□□□□ -0.43
HDAC5-208ENST00000588419 POLR3HQ9Y535 204 aaPredicted RBP12.39□□□□□ -0.43
HDAC5-208ENST00000588419 RAI1Q7Z5J4 1906 aaPredicted RBP12.39□□□□□ -0.43
HDAC5-208ENST00000588419 ARID1AO14497 2285 aa12.38□□□□□ -0.43
HDAC5-208ENST00000588419 SMAD7O15105 426 aaKnown RBP12.38□□□□□ -0.43
HDAC5-208ENST00000588419 HCRTR2O43614 444 aa12.38□□□□□ -0.43
HDAC5-208ENST00000588419 ZIC3O60481 467 aa12.38□□□□□ -0.43
HDAC5-208ENST00000588419 SMPD2O60906 423 aa12.38□□□□□ -0.43
HDAC5-208ENST00000588419 CRCPO75575 148 aa12.38□□□□□ -0.43
HDAC5-208ENST00000588419 CTAGE8P0CG41 777 aa12.38□□□□□ -0.43
HDAC5-208ENST00000588419 PEPDP12955 493 aa12.38□□□□□ -0.43
HDAC5-208ENST00000588419 ATP5F1P24539 256 aaPredicted RBP12.38□□□□□ -0.43
HDAC5-208ENST00000588419 NTSP30990 170 aa12.38□□□□□ -0.43
HDAC5-208ENST00000588419 MPIP34949 423 aa12.38□□□□□ -0.43
HDAC5-208ENST00000588419 GAS1P54826 345 aa12.38□□□□□ -0.43
HDAC5-208ENST00000588419 ZNF763Q0D2J5 394 aa12.38□□□□□ -0.43
HDAC5-208ENST00000588419 EXOC3L2Q2M3D2 409 aa12.38□□□□□ -0.43
HDAC5-208ENST00000588419 OR2A2Q6IF42 318 aa12.38□□□□□ -0.43
HDAC5-208ENST00000588419 SZRD1Q7Z422 152 aa12.38□□□□□ -0.43
HDAC5-208ENST00000588419 KRTAP1-3Q8IUG1 177 aa12.38□□□□□ -0.43
HDAC5-208ENST00000588419 CTAGE4Q8IX94 777 aa12.38□□□□□ -0.43
HDAC5-208ENST00000588419 TMEM151AQ8N4L1 468 aa12.38□□□□□ -0.43
HDAC5-208ENST00000588419 CCNYL1Q8N7R7 359 aa12.38□□□□□ -0.43
HDAC5-208ENST00000588419 OR2M3Q8NG83 312 aa12.38□□□□□ -0.43
HDAC5-208ENST00000588419 ERP27Q96DN0 273 aa12.38□□□□□ -0.43
HDAC5-208ENST00000588419 ZNF845Q96IR2 970 aaPredicted RBP12.38□□□□□ -0.43
HDAC5-208ENST00000588419 WFIKKN1Q96NZ8 548 aa12.38□□□□□ -0.43
HDAC5-208ENST00000588419 UCN2Q96RP3 112 aa12.38□□□□□ -0.43
HDAC5-208ENST00000588419 CCL19Q99731 98 aa12.38□□□□□ -0.43
HDAC5-208ENST00000588419 MID1IP1Q9NPA3 183 aa12.38□□□□□ -0.43
HDAC5-208ENST00000588419 EQTNQ9NQ60 294 aa12.38□□□□□ -0.43
HDAC5-208ENST00000588419 DDX18Q9NVP1 670 aaKnown RBP12.38□□□□□ -0.43
HDAC5-208ENST00000588419 ZNF226Q9NYT6 803 aa12.38□□□□□ -0.43
HDAC5-208ENST00000588419 STK38LQ9Y2H1 464 aa12.38□□□□□ -0.43
HDAC5-208ENST00000588419 MAP1AP78559 2803 aaPredicted RBP12.37□□□□□ -0.43
HDAC5-208ENST00000588419 CCDC151A5D8V7 595 aa12.37□□□□□ -0.43
HDAC5-208ENST00000588419 SHISA8B8ZZ34 492 aa12.37□□□□□ -0.43
HDAC5-208ENST00000588419 MSTNO14793 375 aa12.37□□□□□ -0.43
HDAC5-208ENST00000588419 ENO1P06733 434 aaKnown RBP12.37□□□□□ -0.43
HDAC5-208ENST00000588419 DDCP20711 480 aa12.37□□□□□ -0.43
HDAC5-208ENST00000588419 IMPDH1P20839 514 aa12.37□□□□□ -0.43
HDAC5-208ENST00000588419 ECHS1P30084 290 aa12.37□□□□□ -0.43
HDAC5-208ENST00000588419 HOXC12P31275 282 aa12.37□□□□□ -0.43
HDAC5-208ENST00000588419 CD79BP40259 229 aa12.37□□□□□ -0.43
HDAC5-208ENST00000588419 FOXA1P55317 472 aa12.37□□□□□ -0.43
HDAC5-208ENST00000588419 B3GALT5-AS1P59052 145 aa12.37□□□□□ -0.43
HDAC5-208ENST00000588419 EEF1A1P68104 462 aaKnown RBP12.37□□□□□ -0.43
HDAC5-208ENST00000588419 PSG6Q00889 435 aa12.37□□□□□ -0.43
HDAC5-208ENST00000588419 LCP2Q13094 533 aa12.37□□□□□ -0.43
HDAC5-208ENST00000588419 PON3Q15166 354 aa12.37□□□□□ -0.43
HDAC5-208ENST00000588419 ZNHIT3Q15649 155 aaPredicted RBP12.37□□□□□ -0.43
HDAC5-208ENST00000588419 DECR1Q16698 335 aa12.37□□□□□ -0.43
HDAC5-208ENST00000588419 PRSS53Q2L4Q9 553 aa12.37□□□□□ -0.43
HDAC5-208ENST00000588419 EEF1A1P5Q5VTE0 462 aa12.37□□□□□ -0.43
HDAC5-208ENST00000588419 SHEQ5VZ18 495 aa12.37□□□□□ -0.43
HDAC5-208ENST00000588419 BTLAQ7Z6A9 289 aa12.37□□□□□ -0.43
HDAC5-208ENST00000588419 SLC22A9Q8IVM8 553 aa12.37□□□□□ -0.43
HDAC5-208ENST00000588419 MMGT1Q8N4V1 131 aa12.37□□□□□ -0.43
HDAC5-208ENST00000588419 FNDC9Q8TBE3 224 aa12.37□□□□□ -0.43
HDAC5-208ENST00000588419 STARD4Q96DR4 205 aa12.37□□□□□ -0.43
HDAC5-208ENST00000588419 PERPQ96FX8 193 aa12.37□□□□□ -0.43
HDAC5-208ENST00000588419 KLHL4Q9C0H6 718 aa12.37□□□□□ -0.43
HDAC5-208ENST00000588419 STMN4Q9H169 189 aaPredicted RBP12.37□□□□□ -0.43
HDAC5-208ENST00000588419 PTGES2Q9H7Z7 377 aa12.37□□□□□ -0.43
HDAC5-208ENST00000588419 Q9N2J8 555 aa12.37□□□□□ -0.43
HDAC5-208ENST00000588419 SDHAF3Q9NRP4 125 aa12.37□□□□□ -0.43
HDAC5-208ENST00000588419 TBK1Q9UHD2 729 aa12.37□□□□□ -0.43
HDAC5-208ENST00000588419 SIAH2O43255 324 aa12.36□□□□□ -0.43
HDAC5-208ENST00000588419 ARHGEF9O43307 516 aa12.36□□□□□ -0.43
HDAC5-208ENST00000588419 CTIFO43310 598 aaKnown RBP12.36□□□□□ -0.43
HDAC5-208ENST00000588419 PLOD3O60568 738 aa12.36□□□□□ -0.43
HDAC5-208ENST00000588419 GCAP28676 217 aa12.36□□□□□ -0.43
HDAC5-208ENST00000588419 CCKARP32238 428 aa12.36□□□□□ -0.43
HDAC5-208ENST00000588419 CLK3P49761 638 aaKnown RBP12.36□□□□□ -0.43
HDAC5-208ENST00000588419 SUCLG1P53597 346 aaKnown RBP12.36□□□□□ -0.43
HDAC5-208ENST00000588419 PKNOX1P55347 436 aa12.36□□□□□ -0.43
HDAC5-208ENST00000588419 EEFSECP57772 596 aaKnown RBP12.36□□□□□ -0.43
HDAC5-208ENST00000588419 PSPHP78330 225 aa12.36□□□□□ -0.43
HDAC5-208ENST00000588419 HSPB3Q12988 150 aa12.36□□□□□ -0.43
HDAC5-208ENST00000588419 GANABQ14697 944 aaKnown RBP12.36□□□□□ -0.43
HDAC5-208ENST00000588419 SGCBQ16585 318 aa12.36□□□□□ -0.43
HDAC5-208ENST00000588419 ANKRD34AQ69YU3 496 aa12.36□□□□□ -0.43
HDAC5-208ENST00000588419 ZNF474Q6S9Z5 364 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms