RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 SCAMP2O15127 329 aaKnown RBP17.79■□□□□ 0.44
TPM4-208ENST00000588410 BIRC5O15392 142 aa17.79■□□□□ 0.44
TPM4-208ENST00000588410 IL33O95760 270 aa17.79■□□□□ 0.44
TPM4-208ENST00000588410 IL2RAP01589 272 aa17.79■□□□□ 0.44
TPM4-208ENST00000588410 MSX1P28360 303 aa17.79■□□□□ 0.44
TPM4-208ENST00000588410 TFF3Q07654 80 aa17.79■□□□□ 0.44
TPM4-208ENST00000588410 CHI3L2Q15782 390 aa17.79■□□□□ 0.44
TPM4-208ENST00000588410 C6orf136Q5SQH8 315 aa17.79■□□□□ 0.44
TPM4-208ENST00000588410 DCST1Q5T197 706 aa17.79■□□□□ 0.44
TPM4-208ENST00000588410 IL23RQ5VWK5 629 aa17.79■□□□□ 0.44
TPM4-208ENST00000588410 AAGABQ6PD74 315 aa17.79■□□□□ 0.44
TPM4-208ENST00000588410 ZNF295-AS1Q8N0V1 137 aa17.79■□□□□ 0.44
TPM4-208ENST00000588410 NUP43Q8NFH3 380 aa17.79■□□□□ 0.44
TPM4-208ENST00000588410 OR6Y1Q8NGX8 325 aa17.79■□□□□ 0.44
TPM4-208ENST00000588410 C3orf30Q96M34 536 aa17.79■□□□□ 0.44
TPM4-208ENST00000588410 C1orf50Q9BV19 199 aa17.79■□□□□ 0.44
TPM4-208ENST00000588410 NPDC1Q9NQX5 325 aaPredicted RBP17.79■□□□□ 0.44
TPM4-208ENST00000588410 ATP6V1HQ9UI12 483 aa17.79■□□□□ 0.44
TPM4-208ENST00000588410 ABCG2Q9UNQ0 655 aa17.79■□□□□ 0.44
TPM4-208ENST00000588410 EIF3LQ9Y262 564 aaKnown RBP17.79■□□□□ 0.44
TPM4-208ENST00000588410 NCOA6Q14686 2063 aaPredicted RBP17.78■□□□□ 0.44
TPM4-208ENST00000588410 H0Y3Z8 333 aa17.78■□□□□ 0.44
TPM4-208ENST00000588410 DVL2O14641 736 aa17.78■□□□□ 0.44
TPM4-208ENST00000588410 EMC8O43402 210 aa17.78■□□□□ 0.44
TPM4-208ENST00000588410 LYPLA1O75608 230 aaPredicted RBP17.78■□□□□ 0.44
TPM4-208ENST00000588410 DPP4P27487 766 aa17.78■□□□□ 0.44
TPM4-208ENST00000588410 FRKP42685 505 aaPredicted RBP17.78■□□□□ 0.44
TPM4-208ENST00000588410 ABCE1P61221 599 aaKnown RBP17.78■□□□□ 0.44
TPM4-208ENST00000588410 STX5Q13190 355 aa17.78■□□□□ 0.44
TPM4-208ENST00000588410 NSUN5P2Q63ZY6 315 aa17.78■□□□□ 0.44
TPM4-208ENST00000588410 SEM1Q6ZVN7 128 aa17.78■□□□□ 0.44
TPM4-208ENST00000588410 LIX1LQ8IVB5 337 aa17.78■□□□□ 0.44
TPM4-208ENST00000588410 TRIM42Q8IWZ5 723 aa17.78■□□□□ 0.44
TPM4-208ENST00000588410 CDRT4Q8N9R6 151 aa17.78■□□□□ 0.44
TPM4-208ENST00000588410 ACBD4Q8NC06 268 aa17.78■□□□□ 0.44
TPM4-208ENST00000588410 RNF138Q8WVD3 245 aa17.78■□□□□ 0.44
TPM4-208ENST00000588410 SLC9A6Q92581 669 aa17.78■□□□□ 0.44
TPM4-208ENST00000588410 ZBTB9Q96C00 473 aa17.78■□□□□ 0.44
TPM4-208ENST00000588410 C14orf79Q96F83 325 aa17.78■□□□□ 0.44
TPM4-208ENST00000588410 RMND5BQ96G75 393 aaPredicted RBP17.78■□□□□ 0.44
TPM4-208ENST00000588410 SFXN2Q96NB2 322 aa17.78■□□□□ 0.44
TPM4-208ENST00000588410 ZIM3Q96PE6 472 aa17.78■□□□□ 0.44
TPM4-208ENST00000588410 MS4A4EQ96PG1 132 aa17.78■□□□□ 0.44
TPM4-208ENST00000588410 PRPF18Q99633 342 aaKnown RBP17.78■□□□□ 0.44
TPM4-208ENST00000588410 ATAD3AQ9NVI7 634 aa17.78■□□□□ 0.44
TPM4-208ENST00000588410 FAM120CQ9NX05 1096 aaKnown RBP17.78■□□□□ 0.44
TPM4-208ENST00000588410 A0A1W2PRB8 838 aa17.77■□□□□ 0.44
TPM4-208ENST00000588410 GXYLT2A0PJZ3 443 aa17.77■□□□□ 0.44
TPM4-208ENST00000588410 CD8B2A6NJW9 211 aa17.77■□□□□ 0.44
TPM4-208ENST00000588410 FADS1O60427 444 aa17.77■□□□□ 0.44
TPM4-208ENST00000588410 ZWINTO95229 277 aa17.77■□□□□ 0.44
TPM4-208ENST00000588410 CPN1P15169 458 aa17.77■□□□□ 0.44
TPM4-208ENST00000588410 EFNA1P20827 205 aaPredicted RBP17.77■□□□□ 0.44
TPM4-208ENST00000588410 TCEA1P23193 301 aaKnown RBP17.77■□□□□ 0.44
TPM4-208ENST00000588410 TIMP3P35625 211 aa17.77■□□□□ 0.44
TPM4-208ENST00000588410 GAS1P54826 345 aa17.77■□□□□ 0.44
TPM4-208ENST00000588410 DSCR4P56555 118 aaPredicted RBP17.77■□□□□ 0.44
TPM4-208ENST00000588410 WNT3P56703 355 aa17.77■□□□□ 0.44
TPM4-208ENST00000588410 PRR5P85299 388 aa17.77■□□□□ 0.44
TPM4-208ENST00000588410 SRYQ05066 204 aa17.77■□□□□ 0.44
TPM4-208ENST00000588410 MAD2L1Q13257 205 aaPredicted RBP17.77■□□□□ 0.44
TPM4-208ENST00000588410 CPTPQ5TA50 214 aa17.77■□□□□ 0.44
TPM4-208ENST00000588410 NATD1Q8N6N6 113 aa17.77■□□□□ 0.44
TPM4-208ENST00000588410 TNIP2Q8NFZ5 429 aa17.77■□□□□ 0.44
TPM4-208ENST00000588410 OR7A2PQ8NGA2 310 aa17.77■□□□□ 0.44
TPM4-208ENST00000588410 ZPLD1Q8TCW7 415 aa17.77■□□□□ 0.44
TPM4-208ENST00000588410 PIK3R3Q92569 461 aa17.77■□□□□ 0.44
TPM4-208ENST00000588410 LRRC46Q96FV0 321 aa17.77■□□□□ 0.44
TPM4-208ENST00000588410 TREX2Q9BQ50 279 aaPredicted RBP17.77■□□□□ 0.44
TPM4-208ENST00000588410 TBL1XR1Q9BZK7 514 aa17.77■□□□□ 0.44
TPM4-208ENST00000588410 DSN1Q9H410 356 aa17.77■□□□□ 0.44
TPM4-208ENST00000588410 PTGES2Q9H7Z7 377 aa17.77■□□□□ 0.44
TPM4-208ENST00000588410 CALHM2Q9HA72 323 aa17.77■□□□□ 0.44
TPM4-208ENST00000588410 SLC24A3Q9HC58 644 aa17.77■□□□□ 0.44
TPM4-208ENST00000588410 FLRT3Q9NZU0 649 aa17.77■□□□□ 0.44
TPM4-208ENST00000588410 RPH3AQ9Y2J0 694 aaPredicted RBP17.77■□□□□ 0.44
TPM4-208ENST00000588410 MRPS18CQ9Y3D5 142 aaKnown RBP17.77■□□□□ 0.44
TPM4-208ENST00000588410 ACTL7BQ9Y614 415 aa17.77■□□□□ 0.44
TPM4-208ENST00000588410 GTF3C1Q12789 2109 aa17.77■□□□□ 0.43
TPM4-208ENST00000588410 ENO4A6NNW6 628 aa17.76■□□□□ 0.43
TPM4-208ENST00000588410 ITM2AO43736 263 aa17.76■□□□□ 0.43
TPM4-208ENST00000588410 NKX2-2O95096 273 aa17.76■□□□□ 0.43
TPM4-208ENST00000588410 SNUPNO95149 360 aaKnown RBP17.76■□□□□ 0.43
TPM4-208ENST00000588410 UTS2O95399 124 aa17.76■□□□□ 0.43
TPM4-208ENST00000588410 ALOX5P09917 674 aa17.76■□□□□ 0.43
TPM4-208ENST00000588410 BMP5P22003 454 aa17.76■□□□□ 0.43
TPM4-208ENST00000588410 CEACAM8P31997 349 aaPredicted RBP17.76■□□□□ 0.43
TPM4-208ENST00000588410 TLE4Q04727 773 aa17.76■□□□□ 0.43
TPM4-208ENST00000588410 PTGR1Q14914 329 aa17.76■□□□□ 0.43
TPM4-208ENST00000588410 MLC1Q15049 377 aa17.76■□□□□ 0.43
TPM4-208ENST00000588410 PDCD2Q16342 344 aaPredicted RBP17.76■□□□□ 0.43
TPM4-208ENST00000588410 MARCH3Q86UD3 253 aa17.76■□□□□ 0.43
TPM4-208ENST00000588410 DMRTC2Q8IXT2 367 aaPredicted RBP17.76■□□□□ 0.43
TPM4-208ENST00000588410 FBXO30Q8TB52 745 aa17.76■□□□□ 0.43
TPM4-208ENST00000588410 CHMP6Q96FZ7 201 aa17.76■□□□□ 0.43
TPM4-208ENST00000588410 PGM2Q96G03 612 aa17.76■□□□□ 0.43
TPM4-208ENST00000588410 LURAP1Q96LR2 239 aa17.76■□□□□ 0.43
TPM4-208ENST00000588410 PAIP2Q9BPZ3 127 aaKnown RBP17.76■□□□□ 0.43
TPM4-208ENST00000588410 NTMQ9P121 344 aa17.76■□□□□ 0.43
TPM4-208ENST00000588410 RAP2CQ9Y3L5 183 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms