RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.34□□□□□ -1.07
CIRBP-218ENST00000588344 PRDM4Q9UKN5 801 aa8.34□□□□□ -1.07
CIRBP-218ENST00000588344 ABCG2Q9UNQ0 655 aa8.34□□□□□ -1.07
CIRBP-218ENST00000588344 NBEAQ8NFP9 2946 aa8.33□□□□□ -1.08
CIRBP-218ENST00000588344 ATMQ13315 3056 aa8.33□□□□□ -1.08
CIRBP-218ENST00000588344 TRBV5-3A0A0A0MS03 114 aa8.33□□□□□ -1.08
CIRBP-218ENST00000588344 C15orf38-AP3S2A0A0A6YYH1 394 aa8.33□□□□□ -1.08
CIRBP-218ENST00000588344 H3BNH8 94 aa8.33□□□□□ -1.08
CIRBP-218ENST00000588344 SCDO00767 359 aa8.33□□□□□ -1.08
CIRBP-218ENST00000588344 ZNF354AO60765 605 aaPredicted RBP8.33□□□□□ -1.08
CIRBP-218ENST00000588344 UGT2B11O75310 529 aa8.33□□□□□ -1.08
CIRBP-218ENST00000588344 STX11O75558 287 aa8.33□□□□□ -1.08
CIRBP-218ENST00000588344 F10P00742 488 aa8.33□□□□□ -1.08
CIRBP-218ENST00000588344 OR12D1P0DN82 309 aa8.33□□□□□ -1.08
CIRBP-218ENST00000588344 BMP2P12643 396 aa8.33□□□□□ -1.08
CIRBP-218ENST00000588344 GPX2P18283 190 aa8.33□□□□□ -1.08
CIRBP-218ENST00000588344 TBXA2RP21731 343 aa8.33□□□□□ -1.08
CIRBP-218ENST00000588344 ELAVL4P26378 380 aaKnown RBP8.33□□□□□ -1.08
CIRBP-218ENST00000588344 CASP3P42574 277 aa8.33□□□□□ -1.08
CIRBP-218ENST00000588344 CD97P48960 835 aa8.33□□□□□ -1.08
CIRBP-218ENST00000588344 FBXW4P57775 412 aa8.33□□□□□ -1.08
CIRBP-218ENST00000588344 DSTNP60981 165 aa8.33□□□□□ -1.08
CIRBP-218ENST00000588344 NFATC3Q12968 1075 aa8.33□□□□□ -1.08
CIRBP-218ENST00000588344 KRT72Q14CN4 511 aa8.33□□□□□ -1.08
CIRBP-218ENST00000588344 RGNQ15493 299 aa8.33□□□□□ -1.08
CIRBP-218ENST00000588344 NNATQ16517 81 aa8.33□□□□□ -1.08
CIRBP-218ENST00000588344 DCST2Q5T1A1 773 aa8.33□□□□□ -1.08
CIRBP-218ENST00000588344 PRAMEF8Q5VWM4 474 aa8.33□□□□□ -1.08
CIRBP-218ENST00000588344 PRAMEF7Q5VXH5 474 aa8.33□□□□□ -1.08
CIRBP-218ENST00000588344 REP15Q6BDI9 236 aa8.33□□□□□ -1.08
CIRBP-218ENST00000588344 HEPHL1Q6MZM0 1159 aa8.33□□□□□ -1.08
CIRBP-218ENST00000588344 HACD2Q6Y1H2 254 aa8.33□□□□□ -1.08
CIRBP-218ENST00000588344 GALNTL5Q7Z4T8 443 aa8.33□□□□□ -1.08
CIRBP-218ENST00000588344 MDGA2Q7Z553 956 aa8.33□□□□□ -1.08
CIRBP-218ENST00000588344 ARPINQ7Z6K5 226 aa8.33□□□□□ -1.08
CIRBP-218ENST00000588344 ZNF227Q86WZ6 799 aa8.33□□□□□ -1.08
CIRBP-218ENST00000588344 SULF2Q8IWU5 870 aa8.33□□□□□ -1.08
CIRBP-218ENST00000588344 PRR22Q8IZ63 422 aa8.33□□□□□ -1.08
CIRBP-218ENST00000588344 CLEC4FQ8N1N0 589 aa8.33□□□□□ -1.08
CIRBP-218ENST00000588344 OR10G3Q8NGC4 313 aa8.33□□□□□ -1.08
CIRBP-218ENST00000588344 OR4N2Q8NGD1 307 aa8.33□□□□□ -1.08
CIRBP-218ENST00000588344 OR8J3Q8NGG0 315 aa8.33□□□□□ -1.08
CIRBP-218ENST00000588344 PIK3R3Q92569 461 aa8.33□□□□□ -1.08
CIRBP-218ENST00000588344 CDS1Q92903 461 aa8.33□□□□□ -1.08
CIRBP-218ENST00000588344 HGDQ93099 445 aa8.33□□□□□ -1.08
CIRBP-218ENST00000588344 LRRC58Q96CX6 371 aa8.33□□□□□ -1.08
CIRBP-218ENST00000588344 RMND5BQ96G75 393 aaPredicted RBP8.33□□□□□ -1.08
CIRBP-218ENST00000588344 ANKRD27Q96NW4 1050 aa8.33□□□□□ -1.08
CIRBP-218ENST00000588344 TRNT1Q96Q11 434 aaKnown RBP8.33□□□□□ -1.08
CIRBP-218ENST00000588344 SDF2Q99470 211 aa8.33□□□□□ -1.08
CIRBP-218ENST00000588344 CGREF1Q99674 301 aa8.33□□□□□ -1.08
CIRBP-218ENST00000588344 THUMPD3Q9BV44 507 aaKnown RBP8.33□□□□□ -1.08
CIRBP-218ENST00000588344 ANGPTL4Q9BY76 406 aa8.33□□□□□ -1.08
CIRBP-218ENST00000588344 MFRPQ9BY79 579 aa8.33□□□□□ -1.08
CIRBP-218ENST00000588344 MTHFD2LQ9H903 347 aaPredicted RBP8.33□□□□□ -1.08
CIRBP-218ENST00000588344 KLHL1Q9NR64 748 aa8.33□□□□□ -1.08
CIRBP-218ENST00000588344 AGPAT4Q9NRZ5 378 aa8.33□□□□□ -1.08
CIRBP-218ENST00000588344 NDE1Q9NXR1 346 aa8.33□□□□□ -1.08
CIRBP-218ENST00000588344 VAPAQ9P0L0 249 aa8.33□□□□□ -1.08
CIRBP-218ENST00000588344 P2RX2Q9UBL9 471 aa8.33□□□□□ -1.08
CIRBP-218ENST00000588344 CNOT11Q9UKZ1 510 aaKnown RBP8.33□□□□□ -1.08
CIRBP-218ENST00000588344 BOKQ9UMX3 212 aaPredicted RBP8.33□□□□□ -1.08
CIRBP-218ENST00000588344 PCDHGA10Q9Y5H3 936 aa8.33□□□□□ -1.08
CIRBP-218ENST00000588344 CHCHD2Q9Y6H1 151 aaPredicted RBP8.33□□□□□ -1.08
CIRBP-218ENST00000588344 A0A1W2PQD3 144 aa8.32□□□□□ -1.08
CIRBP-218ENST00000588344 GXYLT2A0PJZ3 443 aa8.32□□□□□ -1.08
CIRBP-218ENST00000588344 TTLL8A6PVC2 850 aa8.32□□□□□ -1.08
CIRBP-218ENST00000588344 B8ZZF3 427 aa8.32□□□□□ -1.08
CIRBP-218ENST00000588344 ACOT7O00154 380 aa8.32□□□□□ -1.08
CIRBP-218ENST00000588344 HMGN4O00479 90 aa8.32□□□□□ -1.08
CIRBP-218ENST00000588344 FBP2O00757 339 aa8.32□□□□□ -1.08
CIRBP-218ENST00000588344 UNC5CO95185 931 aa8.32□□□□□ -1.08
CIRBP-218ENST00000588344 NR2F1P10589 423 aa8.32□□□□□ -1.08
CIRBP-218ENST00000588344 HOXB9P17482 250 aaPredicted RBP8.32□□□□□ -1.08
CIRBP-218ENST00000588344 EVI2BP34910 448 aa8.32□□□□□ -1.08
CIRBP-218ENST00000588344 CRISP3P54108 245 aa8.32□□□□□ -1.08
CIRBP-218ENST00000588344 ATP12AP54707 1039 aa8.32□□□□□ -1.08
CIRBP-218ENST00000588344 KCNJ2P63252 427 aa8.32□□□□□ -1.08
CIRBP-218ENST00000588344 HPCAP84074 193 aa8.32□□□□□ -1.08
CIRBP-218ENST00000588344 RBBP4Q09028 425 aa8.32□□□□□ -1.08
CIRBP-218ENST00000588344 C17orf67Q0P5P2 114 aa8.32□□□□□ -1.08
CIRBP-218ENST00000588344 ZSWIM7Q19AV6 140 aa8.32□□□□□ -1.08
CIRBP-218ENST00000588344 HYAL4Q2M3T9 481 aa8.32□□□□□ -1.08
CIRBP-218ENST00000588344 NADK2Q4G0N4 442 aa8.32□□□□□ -1.08
CIRBP-218ENST00000588344 FLYWCH1Q4VC44 716 aa8.32□□□□□ -1.08
CIRBP-218ENST00000588344 KRTCAP3Q53RY4 240 aa8.32□□□□□ -1.08
CIRBP-218ENST00000588344 TNFAIP8L2Q6P589 184 aaPredicted RBP8.32□□□□□ -1.08
CIRBP-218ENST00000588344 FIGNL1Q6PIW4 674 aa8.32□□□□□ -1.08
CIRBP-218ENST00000588344 DNAJC14Q6Y2X3 702 aaPredicted RBP8.32□□□□□ -1.08
CIRBP-218ENST00000588344 LRRC74BQ6ZQY2 392 aa8.32□□□□□ -1.08
CIRBP-218ENST00000588344 WDR53Q7Z5U6 358 aaPredicted RBP8.32□□□□□ -1.08
CIRBP-218ENST00000588344 SERPINA11Q86U17 422 aa8.32□□□□□ -1.08
CIRBP-218ENST00000588344 RETREG3Q86VR2 466 aa8.32□□□□□ -1.08
CIRBP-218ENST00000588344 SLC22A16Q86VW1 577 aa8.32□□□□□ -1.08
CIRBP-218ENST00000588344 PTRH1Q86Y79 214 aaKnown RBP8.32□□□□□ -1.08
CIRBP-218ENST00000588344 SLC30A8Q8IWU4 369 aa8.32□□□□□ -1.08
CIRBP-218ENST00000588344 ZFP62Q8NB50 900 aaPredicted RBP8.32□□□□□ -1.08
CIRBP-218ENST00000588344 OR2M7Q8NG81 312 aa8.32□□□□□ -1.08
CIRBP-218ENST00000588344 OR5D16Q8NGK9 328 aa8.32□□□□□ -1.08
CIRBP-218ENST00000588344 OR5M3Q8NGP4 307 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms