RNA–Protein interactions for RNA: ENST00000586921.1

SMARCA4-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 569 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-211ENST00000586921 PTPN7P35236 360 aa11.25□□□□□ -0.61
SMARCA4-211ENST00000586921 B3GALT5-AS1P59052 145 aa11.25□□□□□ -0.61
SMARCA4-211ENST00000586921 TGM3Q08188 693 aa11.25□□□□□ -0.61
SMARCA4-211ENST00000586921 BIKQ13323 160 aa11.25□□□□□ -0.61
SMARCA4-211ENST00000586921 ADPRMQ3LIE5 342 aa11.25□□□□□ -0.61
SMARCA4-211ENST00000586921 DESI1Q6ICB0 168 aa11.25□□□□□ -0.61
SMARCA4-211ENST00000586921 SHQ1Q6PI26 577 aaKnown RBP11.25□□□□□ -0.61
SMARCA4-211ENST00000586921 TMIGD1Q6UXZ0 262 aa11.25□□□□□ -0.61
SMARCA4-211ENST00000586921 CCDC25Q86WR0 208 aa11.25□□□□□ -0.61
SMARCA4-211ENST00000586921 ST13P4Q8IZP2 240 aaPredicted RBP11.25□□□□□ -0.61
SMARCA4-211ENST00000586921 ZNF540Q8NDQ6 660 aa11.25□□□□□ -0.61
SMARCA4-211ENST00000586921 ZNF483Q8TF39 744 aaPredicted RBP11.25□□□□□ -0.61
SMARCA4-211ENST00000586921 CKAP2Q8WWK9 683 aa11.25□□□□□ -0.61
SMARCA4-211ENST00000586921 GFM2Q969S9 779 aaKnown RBP11.25□□□□□ -0.61
SMARCA4-211ENST00000586921 NXNL1Q96CM4 212 aa11.25□□□□□ -0.61
SMARCA4-211ENST00000586921 KLHL29Q96CT2 875 aa11.25□□□□□ -0.61
SMARCA4-211ENST00000586921 MFSD3Q96ES6 412 aa11.25□□□□□ -0.61
SMARCA4-211ENST00000586921 MAGEB18Q96M61 343 aa11.25□□□□□ -0.61
SMARCA4-211ENST00000586921 POTEKPQ9BYX7 375 aa11.25□□□□□ -0.61
SMARCA4-211ENST00000586921 PRRG4Q9BZD6 226 aa11.25□□□□□ -0.61
SMARCA4-211ENST00000586921 BPESC1Q9GZL8 116 aa11.25□□□□□ -0.61
SMARCA4-211ENST00000586921 KLHL14Q9P2G3 628 aa11.25□□□□□ -0.61
SMARCA4-211ENST00000586921 XPR1Q9UBH6 696 aa11.25□□□□□ -0.61
SMARCA4-211ENST00000586921 POU2F3Q9UKI9 436 aa11.25□□□□□ -0.61
SMARCA4-211ENST00000586921 MRPS18CQ9Y3D5 142 aaKnown RBP11.25□□□□□ -0.61
SMARCA4-211ENST00000586921 LOC390937A0A1W2PQ73 354 aa11.24□□□□□ -0.61
SMARCA4-211ENST00000586921 E7EQL1 145 aa11.24□□□□□ -0.61
SMARCA4-211ENST00000586921 ZIC3O60481 467 aa11.24□□□□□ -0.61
SMARCA4-211ENST00000586921 CLEC3AO75596 197 aa11.24□□□□□ -0.61
SMARCA4-211ENST00000586921 FGGP02679 453 aa11.24□□□□□ -0.61
SMARCA4-211ENST00000586921 APRTP07741 180 aa11.24□□□□□ -0.61
SMARCA4-211ENST00000586921 F7P08709 466 aaPredicted RBP11.24□□□□□ -0.61
SMARCA4-211ENST00000586921 CPN2P22792 545 aa11.24□□□□□ -0.61
SMARCA4-211ENST00000586921 APEX1P27695 318 aaKnown RBP11.24□□□□□ -0.61
SMARCA4-211ENST00000586921 GSTM2P28161 218 aa11.24□□□□□ -0.61
SMARCA4-211ENST00000586921 SSTR4P31391 388 aa11.24□□□□□ -0.61
SMARCA4-211ENST00000586921 FDFT1P37268 417 aa11.24□□□□□ -0.61
SMARCA4-211ENST00000586921 KCNC1P48547 511 aa11.24□□□□□ -0.61
SMARCA4-211ENST00000586921 RGS4P49798 205 aa11.24□□□□□ -0.61
SMARCA4-211ENST00000586921 FABP6P51161 128 aa11.24□□□□□ -0.61
SMARCA4-211ENST00000586921 ROR2Q01974 943 aaKnown RBP11.24□□□□□ -0.61
SMARCA4-211ENST00000586921 P2RY6Q15077 328 aa11.24□□□□□ -0.61
SMARCA4-211ENST00000586921 SGCBQ16585 318 aa11.24□□□□□ -0.61
SMARCA4-211ENST00000586921 TSNAXIP1Q2TAA8 658 aa11.24□□□□□ -0.61
SMARCA4-211ENST00000586921 SEL1L2Q5TEA6 688 aa11.24□□□□□ -0.61
SMARCA4-211ENST00000586921 UGT3A1Q6NUS8 523 aa11.24□□□□□ -0.61
SMARCA4-211ENST00000586921 CES3Q6UWW8 571 aa11.24□□□□□ -0.61
SMARCA4-211ENST00000586921 SPATA21Q7Z572 469 aa11.24□□□□□ -0.61
SMARCA4-211ENST00000586921 SVOPLQ8N434 492 aa11.24□□□□□ -0.61
SMARCA4-211ENST00000586921 GRK7Q8WTQ7 553 aa11.24□□□□□ -0.61
SMARCA4-211ENST00000586921 EEF1AKMT1Q8WVE0 214 aa11.24□□□□□ -0.61
SMARCA4-211ENST00000586921 HGDQ93099 445 aa11.24□□□□□ -0.61
SMARCA4-211ENST00000586921 KISS1RQ969F8 398 aaPredicted RBP11.24□□□□□ -0.61
SMARCA4-211ENST00000586921 FBXL8Q96CD0 374 aa11.24□□□□□ -0.61
SMARCA4-211ENST00000586921 RADILQ96JH8 1075 aa11.24□□□□□ -0.61
SMARCA4-211ENST00000586921 FAM210AQ96ND0 272 aa11.24□□□□□ -0.61
SMARCA4-211ENST00000586921 KCNC2Q96PR1 638 aa11.24□□□□□ -0.61
SMARCA4-211ENST00000586921 PELOQ9BRX2 385 aaKnown RBP11.24□□□□□ -0.61
SMARCA4-211ENST00000586921 IL22Q9GZX6 179 aa11.24□□□□□ -0.61
SMARCA4-211ENST00000586921 VCXQ9H320 206 aa11.24□□□□□ -0.61
SMARCA4-211ENST00000586921 RABEP2Q9H5N1 569 aa11.24□□□□□ -0.61
SMARCA4-211ENST00000586921 SSU72Q9NP77 194 aaKnown RBP11.24□□□□□ -0.61
SMARCA4-211ENST00000586921 PRDM7Q9NQW5 492 aa11.24□□□□□ -0.61
SMARCA4-211ENST00000586921 CPSF2Q9P2I0 782 aaKnown RBP11.24□□□□□ -0.61
SMARCA4-211ENST00000586921 KCNE2Q9Y6J6 123 aa11.24□□□□□ -0.61
SMARCA4-211ENST00000586921 RIPK2O43353 540 aa11.23□□□□□ -0.61
SMARCA4-211ENST00000586921 GCM2O75603 506 aaPredicted RBP11.23□□□□□ -0.61
SMARCA4-211ENST00000586921 ALDH3A1P30838 453 aa11.23□□□□□ -0.61
SMARCA4-211ENST00000586921 IL2RGP31785 369 aa11.23□□□□□ -0.61
SMARCA4-211ENST00000586921 SLC6A8P48029 635 aa11.23□□□□□ -0.61
SMARCA4-211ENST00000586921 DVL1P1P54792 670 aaPredicted RBP11.23□□□□□ -0.61
SMARCA4-211ENST00000586921 AP1S2P56377 157 aa11.23□□□□□ -0.61
SMARCA4-211ENST00000586921 CLDN20P56880 219 aa11.23□□□□□ -0.61
SMARCA4-211ENST00000586921 RPS3AP61247 264 aaKnown RBP11.23□□□□□ -0.61
SMARCA4-211ENST00000586921 CALCOCO2Q13137 446 aa11.23□□□□□ -0.61
SMARCA4-211ENST00000586921 DEPDC1Q5TB30 811 aa11.23□□□□□ -0.61
SMARCA4-211ENST00000586921 RAET1LQ5VY80 246 aa11.23□□□□□ -0.61
SMARCA4-211ENST00000586921 ZNF470Q6ECI4 717 aa11.23□□□□□ -0.61
SMARCA4-211ENST00000586921 ZNF549Q6P9A3 640 aa11.23□□□□□ -0.61
SMARCA4-211ENST00000586921 ZDHHC24Q6UX98 284 aa11.23□□□□□ -0.61
SMARCA4-211ENST00000586921 NUP54Q7Z3B4 507 aa11.23□□□□□ -0.61
SMARCA4-211ENST00000586921 THOC6Q86W42 341 aaKnown RBP11.23□□□□□ -0.61
SMARCA4-211ENST00000586921 LRRC34Q8IZ02 419 aa11.23□□□□□ -0.61
SMARCA4-211ENST00000586921 MYO1HQ8N1T3 1032 aa11.23□□□□□ -0.61
SMARCA4-211ENST00000586921 PIAS4Q8N2W9 510 aaPredicted RBP11.23□□□□□ -0.61
SMARCA4-211ENST00000586921 ACOT4Q8N9L9 421 aa11.23□□□□□ -0.61
SMARCA4-211ENST00000586921 HPS1Q92902 700 aa11.23□□□□□ -0.61
SMARCA4-211ENST00000586921 ADIPOR1Q96A54 375 aa11.23□□□□□ -0.61
SMARCA4-211ENST00000586921 SPDL1Q96EA4 605 aa11.23□□□□□ -0.61
SMARCA4-211ENST00000586921 ROGDIQ9GZN7 287 aa11.23□□□□□ -0.61
SMARCA4-211ENST00000586921 FAM192AQ9GZU8 254 aa11.23□□□□□ -0.61
SMARCA4-211ENST00000586921 C12orf49Q9H741 205 aa11.23□□□□□ -0.61
SMARCA4-211ENST00000586921 RPF2Q9H7B2 306 aaKnown RBP11.23□□□□□ -0.61
SMARCA4-211ENST00000586921 UNKLQ9H9P5 680 aaKnown RBP11.23□□□□□ -0.61
SMARCA4-211ENST00000586921 RNPEPL1Q9HAU8 725 aa11.23□□□□□ -0.61
SMARCA4-211ENST00000586921 SAR1AQ9NR31 198 aa11.23□□□□□ -0.61
SMARCA4-211ENST00000586921 FBXO34Q9NWN3 711 aa11.23□□□□□ -0.61
SMARCA4-211ENST00000586921 TRMT6Q9UJA5 497 aaKnown RBP11.23□□□□□ -0.61
SMARCA4-211ENST00000586921 USP22Q9UPT9 525 aa11.23□□□□□ -0.61
SMARCA4-211ENST00000586921 PMF1-BGLAPU3KQ54 211 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms