RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 XPNPEP2O43895 674 aa20.72■□□□□ 0.91
CIRBP-208ENST00000586548 WBP4O75554 376 aaKnown RBP20.72■□□□□ 0.91
CIRBP-208ENST00000586548 GUSBP08236 651 aa20.72■□□□□ 0.91
CIRBP-208ENST00000586548 CCNYL3P0C7X3 344 aa20.72■□□□□ 0.91
CIRBP-208ENST00000586548 OSMP13725 252 aa20.72■□□□□ 0.91
CIRBP-208ENST00000586548 MAOAP21397 527 aa20.72■□□□□ 0.91
CIRBP-208ENST00000586548 IFNA8P32881 189 aa20.72■□□□□ 0.91
CIRBP-208ENST00000586548 EMDP50402 254 aa20.72■□□□□ 0.91
CIRBP-208ENST00000586548 TEKQ02763 1124 aa20.72■□□□□ 0.91
CIRBP-208ENST00000586548 PMS2P3Q13401 168 aa20.72■□□□□ 0.91
CIRBP-208ENST00000586548 SQSTM1Q13501 440 aa20.72■□□□□ 0.91
CIRBP-208ENST00000586548 LAIR1Q6GTX8 287 aa20.72■□□□□ 0.91
CIRBP-208ENST00000586548 GPR135Q8IZ08 494 aa20.72■□□□□ 0.91
CIRBP-208ENST00000586548 DIO2Q92813 273 aa20.72■□□□□ 0.91
CIRBP-208ENST00000586548 OR1F2PQ96R84 312 aa20.72■□□□□ 0.91
CIRBP-208ENST00000586548 NODALQ96S42 347 aa20.72■□□□□ 0.91
CIRBP-208ENST00000586548 NUDT22Q9BRQ3 303 aa20.72■□□□□ 0.91
CIRBP-208ENST00000586548 RASSF1Q9NS23 344 aa20.72■□□□□ 0.91
CIRBP-208ENST00000586548 PAK1IP1Q9NWT1 392 aaPredicted RBP20.72■□□□□ 0.91
CIRBP-208ENST00000586548 REV1Q9UBZ9 1251 aa20.72■□□□□ 0.91
CIRBP-208ENST00000586548 AASSQ9UDR5 926 aa20.72■□□□□ 0.91
CIRBP-208ENST00000586548 CDC14AQ9UNH5 594 aa20.72■□□□□ 0.91
CIRBP-208ENST00000586548 SNX5Q9Y5X3 404 aa20.72■□□□□ 0.91
CIRBP-208ENST00000586548 MAU2Q9Y6X3 613 aa20.72■□□□□ 0.91
CIRBP-208ENST00000586548 ZAR1LA6NP61 321 aa20.71■□□□□ 0.91
CIRBP-208ENST00000586548 AP3D1O14617 1153 aa20.71■□□□□ 0.91
CIRBP-208ENST00000586548 BRINP1O60477 761 aa20.71■□□□□ 0.91
CIRBP-208ENST00000586548 TPST2O60704 377 aa20.71■□□□□ 0.91
CIRBP-208ENST00000586548 PRAMEF2O60811 474 aa20.71■□□□□ 0.91
CIRBP-208ENST00000586548 FOLR1P15328 257 aa20.71■□□□□ 0.91
CIRBP-208ENST00000586548 CHMP24386 653 aa20.71■□□□□ 0.91
CIRBP-208ENST00000586548 GSTT1P30711 240 aa20.71■□□□□ 0.91
CIRBP-208ENST00000586548 GSSP48637 474 aa20.71■□□□□ 0.91
CIRBP-208ENST00000586548 PTGES3Q15185 160 aaKnown RBP20.71■□□□□ 0.91
CIRBP-208ENST00000586548 NEDD8Q15843 81 aa20.71■□□□□ 0.91
CIRBP-208ENST00000586548 YOD1Q5VVQ6 348 aaPredicted RBP20.71■□□□□ 0.91
CIRBP-208ENST00000586548 MORN4Q8NDC4 146 aa20.71■□□□□ 0.91
CIRBP-208ENST00000586548 OR4K5Q8NGD3 323 aa20.71■□□□□ 0.91
CIRBP-208ENST00000586548 APH1BQ8WW43 257 aa20.71■□□□□ 0.91
CIRBP-208ENST00000586548 UBE2FQ969M7 185 aa20.71■□□□□ 0.91
CIRBP-208ENST00000586548 DUSP21Q9H596 190 aa20.71■□□□□ 0.91
CIRBP-208ENST00000586548 LANCL2Q9NS86 450 aa20.71■□□□□ 0.91
CIRBP-208ENST00000586548 NDOR1Q9UHB4 597 aa20.71■□□□□ 0.91
CIRBP-208ENST00000586548 MMACHCQ9Y4U1 282 aa20.71■□□□□ 0.91
CIRBP-208ENST00000586548 COMMD3-BMI1R4GMX3 469 aa20.71■□□□□ 0.91
CIRBP-208ENST00000586548 UNC13CQ8NB66 2214 aa20.71■□□□□ 0.91
CIRBP-208ENST00000586548 ASXL3Q9C0F0 2248 aa20.71■□□□□ 0.91
CIRBP-208ENST00000586548 GXYLT2A0PJZ3 443 aa20.7■□□□□ 0.9
CIRBP-208ENST00000586548 A8MU76 341 aa20.7■□□□□ 0.9
CIRBP-208ENST00000586548 PTGES3LE9PB15 166 aa20.7■□□□□ 0.9
CIRBP-208ENST00000586548 PAX7P23759 505 aa20.7■□□□□ 0.9
CIRBP-208ENST00000586548 SSTR4P31391 388 aa20.7■□□□□ 0.9
CIRBP-208ENST00000586548 KRT20P35900 424 aa20.7■□□□□ 0.9
CIRBP-208ENST00000586548 SLC35A2P78381 396 aa20.7■□□□□ 0.9
CIRBP-208ENST00000586548 PSG6Q00889 435 aa20.7■□□□□ 0.9
CIRBP-208ENST00000586548 ST3GAL3Q11203 375 aa20.7■□□□□ 0.9
CIRBP-208ENST00000586548 ILKQ13418 452 aa20.7■□□□□ 0.9
CIRBP-208ENST00000586548 ZNF267Q14586 743 aaPredicted RBP20.7■□□□□ 0.9
CIRBP-208ENST00000586548 RAB39AQ14964 217 aa20.7■□□□□ 0.9
CIRBP-208ENST00000586548 TRAM2Q15035 370 aa20.7■□□□□ 0.9
CIRBP-208ENST00000586548 TMEM71Q6P5X7 295 aa20.7■□□□□ 0.9
CIRBP-208ENST00000586548 CD300LDQ6UXZ3 194 aa20.7■□□□□ 0.9
CIRBP-208ENST00000586548 RHOXF1Q8NHV9 184 aa20.7■□□□□ 0.9
CIRBP-208ENST00000586548 SLC38A4Q969I6 547 aa20.7■□□□□ 0.9
CIRBP-208ENST00000586548 ZC3H10Q96K80 434 aaKnown RBP20.7■□□□□ 0.9
CIRBP-208ENST00000586548 VSTM2LQ96N03 204 aa20.7■□□□□ 0.9
CIRBP-208ENST00000586548 NDC1Q9BTX1 674 aa20.7■□□□□ 0.9
CIRBP-208ENST00000586548 CCNB1IP1Q9NPC3 277 aa20.7■□□□□ 0.9
CIRBP-208ENST00000586548 CTPS2Q9NRF8 586 aa20.7■□□□□ 0.9
CIRBP-208ENST00000586548 FBXO34Q9NWN3 711 aa20.7■□□□□ 0.9
CIRBP-208ENST00000586548 RSL24D1Q9UHA3 163 aaKnown RBP20.7■□□□□ 0.9
CIRBP-208ENST00000586548 SERTAD3Q9UJW9 196 aa20.7■□□□□ 0.9
CIRBP-208ENST00000586548 LY6G6EA0A0G2JKS1 128 aa20.7■□□□□ 0.9
CIRBP-208ENST00000586548 CENPVL1A0A0U1RR11 272 aa20.7■□□□□ 0.9
CIRBP-208ENST00000586548 MRPS14O60783 128 aaKnown RBP20.7■□□□□ 0.9
CIRBP-208ENST00000586548 FAM20BO75063 409 aa20.7■□□□□ 0.9
CIRBP-208ENST00000586548 CYP7B1O75881 506 aa20.7■□□□□ 0.9
CIRBP-208ENST00000586548 KCNK2O95069 426 aa20.7■□□□□ 0.9
CIRBP-208ENST00000586548 NID1P14543 1247 aa20.7■□□□□ 0.9
CIRBP-208ENST00000586548 ALAS2P22557 587 aa20.7■□□□□ 0.9
CIRBP-208ENST00000586548 IDH2P48735 452 aaKnown RBP20.7■□□□□ 0.9
CIRBP-208ENST00000586548 CDC42P60953 191 aa20.7■□□□□ 0.9
CIRBP-208ENST00000586548 FUT7Q11130 342 aa20.7■□□□□ 0.9
CIRBP-208ENST00000586548 COX10Q12887 443 aa20.7■□□□□ 0.9
CIRBP-208ENST00000586548 TARDBPQ13148 414 aaKnown RBP eCLIP20.7■□□□□ 0.9
CIRBP-208ENST00000586548 MAPK14Q16539 360 aa20.7■□□□□ 0.9
CIRBP-208ENST00000586548 XAF1Q6GPH4 301 aa20.7■□□□□ 0.9
CIRBP-208ENST00000586548 FIGNL1Q6PIW4 674 aa20.7■□□□□ 0.9
CIRBP-208ENST00000586548 PLEKHM3Q6ZWE6 761 aa20.7■□□□□ 0.9
CIRBP-208ENST00000586548 P3H2Q8IVL5 708 aa20.7■□□□□ 0.9
CIRBP-208ENST00000586548 FAM181AQ8N9Y4 354 aa20.7■□□□□ 0.9
CIRBP-208ENST00000586548 MCHR1Q99705 422 aa20.7■□□□□ 0.9
CIRBP-208ENST00000586548 FANCEQ9HB96 536 aa20.7■□□□□ 0.9
CIRBP-208ENST00000586548 NECTIN3Q9NQS3 549 aa20.7■□□□□ 0.9
CIRBP-208ENST00000586548 U3KQA8 63 aa20.7■□□□□ 0.9
CIRBP-208ENST00000586548 RP1P56715 2156 aa20.69■□□□□ 0.9
CIRBP-208ENST00000586548 TTC36A6NLP5 189 aa20.69■□□□□ 0.9
CIRBP-208ENST00000586548 CPSF4LA6NMK7 179 aaKnown RBP20.69■□□□□ 0.9
CIRBP-208ENST00000586548 DSCR3O14972 297 aa20.69■□□□□ 0.9
CIRBP-208ENST00000586548 SIGLEC6O43699 453 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms