RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 VPS11Q9H270 941 aa10.68□□□□□ -0.7
BRCA1-225ENST00000586385 ELOVL6Q9H5J4 265 aa10.68□□□□□ -0.7
BRCA1-225ENST00000586385 MED11Q9P086 117 aa10.68□□□□□ -0.7
BRCA1-225ENST00000586385 XPR1Q9UBH6 696 aa10.68□□□□□ -0.7
BRCA1-225ENST00000586385 ZNF175Q9Y473 711 aa10.68□□□□□ -0.7
BRCA1-225ENST00000586385 SEC14L5O43304 696 aa10.67□□□□□ -0.7
BRCA1-225ENST00000586385 PLOD3O60568 738 aa10.67□□□□□ -0.7
BRCA1-225ENST00000586385 GUCY1B2O75343 617 aa10.67□□□□□ -0.7
BRCA1-225ENST00000586385 IL3P08700 152 aa10.67□□□□□ -0.7
BRCA1-225ENST00000586385 HK1P19367 917 aa10.67□□□□□ -0.7
BRCA1-225ENST00000586385 TBXA2RP21731 343 aa10.67□□□□□ -0.7
BRCA1-225ENST00000586385 TYK2P29597 1187 aa10.67□□□□□ -0.7
BRCA1-225ENST00000586385 SERPINB8P50452 374 aa10.67□□□□□ -0.7
BRCA1-225ENST00000586385 TRA2BP62995 288 aaKnown RBP10.67□□□□□ -0.7
BRCA1-225ENST00000586385 TMEM44Q2T9K0 475 aa10.67□□□□□ -0.7
BRCA1-225ENST00000586385 RAET1LQ5VY80 246 aa10.67□□□□□ -0.7
BRCA1-225ENST00000586385 STAC2Q6ZMT1 411 aa10.67□□□□□ -0.7
BRCA1-225ENST00000586385 ZNF704Q6ZNC4 412 aaPredicted RBP10.67□□□□□ -0.7
BRCA1-225ENST00000586385 SH2D5Q6ZV89 423 aa10.67□□□□□ -0.7
BRCA1-225ENST00000586385 PLEKHM3Q6ZWE6 761 aa10.67□□□□□ -0.7
BRCA1-225ENST00000586385 GGNQ86UU5 652 aa10.67□□□□□ -0.7
BRCA1-225ENST00000586385 SLC44A2Q8IWA5 706 aaPredicted RBP10.67□□□□□ -0.7
BRCA1-225ENST00000586385 METTL25Q8N6Q8 603 aa10.67□□□□□ -0.7
BRCA1-225ENST00000586385 GBP7Q8N8V2 638 aaPredicted RBP10.67□□□□□ -0.7
BRCA1-225ENST00000586385 MAPK1IP1LQ8NDC0 245 aa10.67□□□□□ -0.7
BRCA1-225ENST00000586385 SELENOMQ8WWX9 145 aa10.67□□□□□ -0.7
BRCA1-225ENST00000586385 NANOS1Q8WY41 292 aaKnown RBP10.67□□□□□ -0.7
BRCA1-225ENST00000586385 CAVIN3Q969G5 261 aa10.67□□□□□ -0.7
BRCA1-225ENST00000586385 ERP27Q96DN0 273 aa10.67□□□□□ -0.7
BRCA1-225ENST00000586385 C11orf24Q96F05 449 aaPredicted RBP10.67□□□□□ -0.7
BRCA1-225ENST00000586385 NPAS1Q99742 590 aa10.67□□□□□ -0.7
BRCA1-225ENST00000586385 BRF2Q9HAW0 419 aa10.67□□□□□ -0.7
BRCA1-225ENST00000586385 RNF14Q9UBS8 474 aa10.67□□□□□ -0.7
BRCA1-225ENST00000586385 PSME2Q9UL46 239 aa10.67□□□□□ -0.7
BRCA1-225ENST00000586385 ZNF780BQ9Y6R6 833 aa10.67□□□□□ -0.7
BRCA1-225ENST00000586385 SHISA8B8ZZ34 492 aa10.66□□□□□ -0.7
BRCA1-225ENST00000586385 IL12BP29460 328 aa10.66□□□□□ -0.7
BRCA1-225ENST00000586385 KCNJ5P48544 419 aa10.66□□□□□ -0.7
BRCA1-225ENST00000586385 HTR6P50406 440 aa10.66□□□□□ -0.7
BRCA1-225ENST00000586385 STX5Q13190 355 aa10.66□□□□□ -0.7
BRCA1-225ENST00000586385 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.66□□□□□ -0.7
BRCA1-225ENST00000586385 BEX5Q5H9J7 111 aa10.66□□□□□ -0.7
BRCA1-225ENST00000586385 KLC3Q6P597 504 aa10.66□□□□□ -0.7
BRCA1-225ENST00000586385 APOOLQ6UXV4 268 aa10.66□□□□□ -0.7
BRCA1-225ENST00000586385 FAM214BQ7L5A3 538 aa10.66□□□□□ -0.7
BRCA1-225ENST00000586385 CHMP1BQ7LBR1 199 aa10.66□□□□□ -0.7
BRCA1-225ENST00000586385 MEIOBQ8N635 442 aa10.66□□□□□ -0.7
BRCA1-225ENST00000586385 LILRB1Q8NHL6 650 aaPredicted RBP10.66□□□□□ -0.7
BRCA1-225ENST00000586385 EXOSC8Q96B26 276 aaKnown RBP10.66□□□□□ -0.7
BRCA1-225ENST00000586385 C1GALT1C1Q96EU7 318 aa10.66□□□□□ -0.7
BRCA1-225ENST00000586385 FAIM2Q9BWQ8 316 aa10.66□□□□□ -0.7
BRCA1-225ENST00000586385 C1QTNF3Q9BXJ4 246 aa10.66□□□□□ -0.7
BRCA1-225ENST00000586385 KLHL4Q9C0H6 718 aa10.66□□□□□ -0.7
BRCA1-225ENST00000586385 ZDHHC18Q9NUE0 388 aa10.66□□□□□ -0.7
BRCA1-225ENST00000586385 PPP4R1LQ9P1A2 415 aa10.66□□□□□ -0.7
BRCA1-225ENST00000586385 MCM8Q9UJA3 840 aa10.66□□□□□ -0.7
BRCA1-225ENST00000586385 CLEC4AQ9UMR7 237 aa10.66□□□□□ -0.7
BRCA1-225ENST00000586385 PROCRQ9UNN8 238 aa10.66□□□□□ -0.7
BRCA1-225ENST00000586385 ESYT3A0FGR9 886 aa10.65□□□□□ -0.7
BRCA1-225ENST00000586385 A8MT66 165 aa10.65□□□□□ -0.7
BRCA1-225ENST00000586385 H3BML4 177 aa10.65□□□□□ -0.7
BRCA1-225ENST00000586385 MANBAO00462 879 aa10.65□□□□□ -0.7
BRCA1-225ENST00000586385 HS3ST1O14792 307 aa10.65□□□□□ -0.7
BRCA1-225ENST00000586385 BCAS2O75934 225 aaPredicted RBP10.65□□□□□ -0.7
BRCA1-225ENST00000586385 OR4F21O95013 312 aa10.65□□□□□ -0.7
BRCA1-225ENST00000586385 PSMG1O95456 288 aa10.65□□□□□ -0.7
BRCA1-225ENST00000586385 RBP1P09455 135 aa10.65□□□□□ -0.7
BRCA1-225ENST00000586385 ATP5J2P56134 94 aa10.65□□□□□ -0.7
BRCA1-225ENST00000586385 ZNF844Q08AG5 666 aa10.65□□□□□ -0.7
BRCA1-225ENST00000586385 UAP1Q16222 522 aaPredicted RBP10.65□□□□□ -0.7
BRCA1-225ENST00000586385 EXOC3L2Q2M3D2 409 aa10.65□□□□□ -0.7
BRCA1-225ENST00000586385 CTU2Q2VPK5 515 aaKnown RBP10.65□□□□□ -0.7
BRCA1-225ENST00000586385 MARCH3Q86UD3 253 aa10.65□□□□□ -0.7
BRCA1-225ENST00000586385 ZNF611Q8N823 705 aa10.65□□□□□ -0.7
BRCA1-225ENST00000586385 UHMK1Q8TAS1 419 aaKnown RBP10.65□□□□□ -0.7
BRCA1-225ENST00000586385 MTBPQ96DY7 904 aa10.65□□□□□ -0.7
BRCA1-225ENST00000586385 APIPQ96GX9 242 aa10.65□□□□□ -0.7
BRCA1-225ENST00000586385 ADGRG7Q96K78 797 aa10.65□□□□□ -0.7
BRCA1-225ENST00000586385 KLHDC3Q9BQ90 382 aa10.65□□□□□ -0.7
BRCA1-225ENST00000586385 ACPTQ9BZG2 426 aa10.65□□□□□ -0.7
BRCA1-225ENST00000586385 ACSS3Q9H6R3 686 aa10.65□□□□□ -0.7
BRCA1-225ENST00000586385 SLC35C2Q9NQQ7 365 aa10.65□□□□□ -0.7
BRCA1-225ENST00000586385 PLSCR4Q9NRQ2 329 aa10.65□□□□□ -0.7
BRCA1-225ENST00000586385 VPS29Q9UBQ0 182 aa10.65□□□□□ -0.7
BRCA1-225ENST00000586385 PYCARDQ9ULZ3 195 aa10.65□□□□□ -0.7
BRCA1-225ENST00000586385 HEATR5AQ86XA9 2040 aa10.65□□□□□ -0.71
BRCA1-225ENST00000586385 IGLV3-32A0A0A0MS00 114 aa10.64□□□□□ -0.71
BRCA1-225ENST00000586385 RNF223E7ERA6 249 aa10.64□□□□□ -0.71
BRCA1-225ENST00000586385 OVOL3O00110 214 aa10.64□□□□□ -0.71
BRCA1-225ENST00000586385 PCDH7O60245 1069 aa10.64□□□□□ -0.71
BRCA1-225ENST00000586385 ESRRBO95718 433 aa10.64□□□□□ -0.71
BRCA1-225ENST00000586385 OTCP00480 354 aa10.64□□□□□ -0.71
BRCA1-225ENST00000586385 IGKV1D-16P01601 117 aa10.64□□□□□ -0.71
BRCA1-225ENST00000586385 THBS1P07996 1170 aa10.64□□□□□ -0.71
BRCA1-225ENST00000586385 HSD17B3P37058 310 aa10.64□□□□□ -0.71
BRCA1-225ENST00000586385 OCRLQ01968 901 aa10.64□□□□□ -0.71
BRCA1-225ENST00000586385 CAV1Q03135 178 aa10.64□□□□□ -0.71
BRCA1-225ENST00000586385 GANABQ14697 944 aaKnown RBP10.64□□□□□ -0.71
BRCA1-225ENST00000586385 ERCC6LQ2NKX8 1250 aa10.64□□□□□ -0.71
BRCA1-225ENST00000586385 UNC50Q53HI1 259 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms