RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 EI24O14681 340 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 ACOX3O15254 700 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 KIAA0513O60268 411 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 DNAJB6O75190 326 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 JRKO75564 520 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 STK17BO94768 372 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 CCNB2O95067 398 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 NKX2-2O95096 273 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 MFN2O95140 757 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 RASAL1O95294 804 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 OXSR1O95747 527 aaPredicted RBP5.75□□□□□ -1.49
LIG3-206ENST00000586058 CBX7O95931 251 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 CHRM4P08173 479 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 GUSBP08236 651 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 CT62P0C5K7 136 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 ENDOUP21128 410 aaKnown RBP5.75□□□□□ -1.49
LIG3-206ENST00000586058 IGFBP5P24593 272 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 SSTR4P31391 388 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 IFNGR2P38484 337 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 KCNJ5P48544 419 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 ALDH3A2P51648 485 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 PDX1P52945 283 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 UGT2B15P54855 530 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 AQP4P55087 323 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 CDH12P55289 794 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 TAS2R41P59536 307 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 RPP38P78345 283 aaKnown RBP5.75□□□□□ -1.49
LIG3-206ENST00000586058 KCNJ10P78508 379 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 VLDLRP98155 873 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 INSM1Q01101 510 aaPredicted RBP5.75□□□□□ -1.49
LIG3-206ENST00000586058 IL1RL1Q01638 556 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 EEF1A2Q05639 463 aaKnown RBP5.75□□□□□ -1.49
LIG3-206ENST00000586058 FUT7Q11130 342 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 TCF15Q12870 199 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 DUSP8Q13202 625 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 DAG1Q14118 895 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 NCF4Q15080 339 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 NKG7Q16617 165 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 NRF1Q16656 503 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 CYP27C1Q4G0S4 372 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 SFT2D3Q587I9 215 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 CMPK2Q5EBM0 449 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 COLEC12Q5KU26 742 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 OTUD3Q5T2D3 398 aaPredicted RBP5.75□□□□□ -1.49
LIG3-206ENST00000586058 PRAMEF17Q5VTA0 474 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 RNF220Q5VTB9 566 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 HEPHL1Q6MZM0 1159 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 HMBOX1Q6NT76 420 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 FIGNL1Q6PIW4 674 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 PAPD4Q6PIY7 484 aaKnown RBP5.75□□□□□ -1.49
LIG3-206ENST00000586058 DHRS4L2Q6PKH6 230 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 C6orf15Q6UXA7 325 aaPredicted RBP5.75□□□□□ -1.49
LIG3-206ENST00000586058 HSDL2Q6YN16 418 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 SHISA6Q6ZSJ9 500 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 PIWIL3Q7Z3Z3 882 aaKnown RBP5.75□□□□□ -1.49
LIG3-206ENST00000586058 GLRX5Q86SX6 157 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 RAB43Q86YS6 212 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 CMIPQ8IY22 773 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 ZNF440Q8IYI8 595 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 LILRA2Q8N149 483 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 GALNT15Q8N3T1 639 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 CBR4Q8N4T8 237 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 TMCO5AQ8N6Q1 288 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 FAM86B1Q8N7N1 296 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 BMPERQ8N8U9 685 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 ATG16L2Q8NAA4 619 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 B3GNT7Q8NFL0 401 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 OR1N1Q8NGS0 311 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 C16orf52Q8NHV5 167 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 SLC22A8Q8TCC7 542 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 MAGEE2Q8TD90 523 aaPredicted RBP5.75□□□□□ -1.49
LIG3-206ENST00000586058 PIK3R3Q92569 461 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 KIAA1143Q96AT1 154 aaPredicted RBP5.75□□□□□ -1.49
LIG3-206ENST00000586058 HSPBAP1Q96EW2 488 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 NRBF2Q96F24 287 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 NAF1Q96HR8 494 aaKnown RBP5.75□□□□□ -1.49
LIG3-206ENST00000586058 LCORQ96JN0 433 aaPredicted RBP5.75□□□□□ -1.49
LIG3-206ENST00000586058 PRRC1Q96M27 445 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 ZNF300Q96RE9 604 aaPredicted RBP5.75□□□□□ -1.49
LIG3-206ENST00000586058 PIP5K1AQ99755 562 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 ITPAQ9BY32 194 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 TRIM4Q9C037 500 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 FAM117AQ9C073 453 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 SERHL2Q9H4I8 314 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 ANKRA2Q9H9E1 313 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 POLR1BQ9H9Y6 1135 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 APMAPQ9HDC9 416 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 KRT84Q9NSB2 600 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.75□□□□□ -1.49
LIG3-206ENST00000586058 FAM86C1Q9NVL1 165 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 TESQ9UGI8 421 aaKnown RBP5.75□□□□□ -1.49
LIG3-206ENST00000586058 ZNF639Q9UID6 485 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 PRDM4Q9UKN5 801 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 MKLN1Q9UL63 735 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 SLC35A3Q9Y2D2 325 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 PTRH2Q9Y3E5 179 aaKnown RBP5.75□□□□□ -1.49
LIG3-206ENST00000586058 TESMINQ9Y4I5 508 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 TMEM184BQ9Y519 407 aaPredicted RBP5.75□□□□□ -1.49
LIG3-206ENST00000586058 ENPP4Q9Y6X5 453 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 U3KQV3 271 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms