RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 C17orf47Q8NEP4 570 aa11.73□□□□□ -0.53
VMP1-202ENST00000585847 OR7G2Q8NG99 324 aa11.73□□□□□ -0.53
VMP1-202ENST00000585847 PNPT1Q8TCS8 783 aaKnown RBP11.73□□□□□ -0.53
VMP1-202ENST00000585847 SNRNP27Q8WVK2 155 aaKnown RBP11.73□□□□□ -0.53
VMP1-202ENST00000585847 CANT1Q8WVQ1 401 aa11.73□□□□□ -0.53
VMP1-202ENST00000585847 GEMIN6Q8WXD5 167 aaKnown RBP11.73□□□□□ -0.53
VMP1-202ENST00000585847 PPWD1Q96BP3 646 aaKnown RBP11.73□□□□□ -0.53
VMP1-202ENST00000585847 SLC47A1Q96FL8 570 aa11.73□□□□□ -0.53
VMP1-202ENST00000585847 WBP1Q96G27 269 aa11.73□□□□□ -0.53
VMP1-202ENST00000585847 IMMP1LQ96LU5 166 aa11.73□□□□□ -0.53
VMP1-202ENST00000585847 LMF2Q9BU23 707 aaKnown RBP11.73□□□□□ -0.53
VMP1-202ENST00000585847 DOHHQ9BU89 302 aa11.73□□□□□ -0.53
VMP1-202ENST00000585847 G6PC3Q9BUM1 346 aa11.73□□□□□ -0.53
VMP1-202ENST00000585847 OR51I1Q9H343 314 aa11.73□□□□□ -0.53
VMP1-202ENST00000585847 ARMC7Q9H6L4 198 aa11.73□□□□□ -0.53
VMP1-202ENST00000585847 HHATLQ9HCP6 504 aa11.73□□□□□ -0.53
VMP1-202ENST00000585847 AGPAT4Q9NRZ5 378 aa11.73□□□□□ -0.53
VMP1-202ENST00000585847 RIMS3Q9UJD0 308 aa11.73□□□□□ -0.53
VMP1-202ENST00000585847 MRTO4Q9UKD2 239 aaKnown RBP11.73□□□□□ -0.53
VMP1-202ENST00000585847 AURKCQ9UQB9 309 aa11.73□□□□□ -0.53
VMP1-202ENST00000585847 DSPPQ9NZW4 1301 aa11.72□□□□□ -0.53
VMP1-202ENST00000585847 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.72□□□□□ -0.53
VMP1-202ENST00000585847 SYT5O00445 386 aa11.72□□□□□ -0.53
VMP1-202ENST00000585847 BAG2O95816 211 aa11.72□□□□□ -0.53
VMP1-202ENST00000585847 EFNA1P20827 205 aaPredicted RBP11.72□□□□□ -0.53
VMP1-202ENST00000585847 MSX2P35548 267 aaPredicted RBP11.72□□□□□ -0.53
VMP1-202ENST00000585847 PTDSS1P48651 473 aaKnown RBP11.72□□□□□ -0.53
VMP1-202ENST00000585847 MAN2A2P49641 1150 aa11.72□□□□□ -0.53
VMP1-202ENST00000585847 GPR143P51810 404 aa11.72□□□□□ -0.53
VMP1-202ENST00000585847 SELENOWP63302 87 aa11.72□□□□□ -0.53
VMP1-202ENST00000585847 Q0VFX4 171 aa11.72□□□□□ -0.53
VMP1-202ENST00000585847 MGAT2Q10469 447 aa11.72□□□□□ -0.53
VMP1-202ENST00000585847 NSDHLQ15738 373 aa11.72□□□□□ -0.53
VMP1-202ENST00000585847 IFI44LQ53G44 452 aa11.72□□□□□ -0.53
VMP1-202ENST00000585847 EIPR1Q53HC9 387 aa11.72□□□□□ -0.53
VMP1-202ENST00000585847 SFT2D3Q587I9 215 aa11.72□□□□□ -0.53
VMP1-202ENST00000585847 COX20Q5RI15 118 aa11.72□□□□□ -0.53
VMP1-202ENST00000585847 TNFAIP8L2Q6P589 184 aaPredicted RBP11.72□□□□□ -0.53
VMP1-202ENST00000585847 PCSK4Q6UW60 755 aa11.72□□□□□ -0.53
VMP1-202ENST00000585847 CCDC81Q6ZN84 652 aa11.72□□□□□ -0.53
VMP1-202ENST00000585847 KBTBD2Q8IY47 623 aa11.72□□□□□ -0.53
VMP1-202ENST00000585847 SVOPLQ8N434 492 aa11.72□□□□□ -0.53
VMP1-202ENST00000585847 HORMAD2Q8N7B1 307 aa11.72□□□□□ -0.53
VMP1-202ENST00000585847 ANKFN1Q8N957 763 aa11.72□□□□□ -0.53
VMP1-202ENST00000585847 NFAM1Q8NET5 270 aaPredicted RBP11.72□□□□□ -0.53
VMP1-202ENST00000585847 DOK4Q8TEW6 326 aa11.72□□□□□ -0.53
VMP1-202ENST00000585847 SLC38A5Q8WUX1 472 aa11.72□□□□□ -0.53
VMP1-202ENST00000585847 METTL21AQ8WXB1 218 aa11.72□□□□□ -0.53
VMP1-202ENST00000585847 SLC35B4Q969S0 331 aa11.72□□□□□ -0.53
VMP1-202ENST00000585847 SDCCAG3Q96C92 435 aa11.72□□□□□ -0.53
VMP1-202ENST00000585847 GIMAP5Q96F15 307 aa11.72□□□□□ -0.53
VMP1-202ENST00000585847 TMEM19Q96HH6 336 aa11.72□□□□□ -0.53
VMP1-202ENST00000585847 C9orf16Q9BUW7 83 aa11.72□□□□□ -0.53
VMP1-202ENST00000585847 CHID1Q9BWS9 393 aa11.72□□□□□ -0.53
VMP1-202ENST00000585847 TRIM8Q9BZR9 551 aa11.72□□□□□ -0.53
VMP1-202ENST00000585847 POLR2J2Q9GZM3 115 aaKnown RBP11.72□□□□□ -0.53
VMP1-202ENST00000585847 ZNF700Q9H0M5 742 aa11.72□□□□□ -0.53
VMP1-202ENST00000585847 POLR2J3Q9H1A7 115 aaKnown RBP11.72□□□□□ -0.53
VMP1-202ENST00000585847 Q9N2J8 555 aa11.72□□□□□ -0.53
VMP1-202ENST00000585847 IL1RAPQ9NPH3 570 aa11.72□□□□□ -0.53
VMP1-202ENST00000585847 P4HTMQ9NXG6 502 aa11.72□□□□□ -0.53
VMP1-202ENST00000585847 DNAJB9Q9UBS3 223 aa11.72□□□□□ -0.53
VMP1-202ENST00000585847 COPS7AQ9UBW8 275 aa11.72□□□□□ -0.53
VMP1-202ENST00000585847 PPIEQ9UNP9 301 aaKnown RBP11.72□□□□□ -0.53
VMP1-202ENST00000585847 IFT52Q9Y366 437 aa11.72□□□□□ -0.53
VMP1-202ENST00000585847 CLCA3PQ9Y6N3 262 aa11.72□□□□□ -0.53
VMP1-202ENST00000585847 MAST4O15021 2626 aa11.71□□□□□ -0.53
VMP1-202ENST00000585847 A8MUA0 341 aa11.71□□□□□ -0.53
VMP1-202ENST00000585847 SLC28A2O43868 658 aa11.71□□□□□ -0.53
VMP1-202ENST00000585847 PRKD3O94806 890 aa11.71□□□□□ -0.53
VMP1-202ENST00000585847 PRSS23O95084 383 aa11.71□□□□□ -0.53
VMP1-202ENST00000585847 NKX2-2O95096 273 aa11.71□□□□□ -0.53
VMP1-202ENST00000585847 PGM3O95394 542 aa11.71□□□□□ -0.53
VMP1-202ENST00000585847 IFNA16P05015 189 aa11.71□□□□□ -0.53
VMP1-202ENST00000585847 FABP3P05413 133 aa11.71□□□□□ -0.53
VMP1-202ENST00000585847 THBS1P07996 1170 aa11.71□□□□□ -0.53
VMP1-202ENST00000585847 CELA2AP08217 269 aa11.71□□□□□ -0.53
VMP1-202ENST00000585847 CT62P0C5K7 136 aa11.71□□□□□ -0.53
VMP1-202ENST00000585847 NCK1P16333 377 aa11.71□□□□□ -0.53
VMP1-202ENST00000585847 TRHRP34981 398 aaPredicted RBP11.71□□□□□ -0.53
VMP1-202ENST00000585847 PTGER1P34995 402 aa11.71□□□□□ -0.53
VMP1-202ENST00000585847 MAP3K8P41279 467 aa11.71□□□□□ -0.53
VMP1-202ENST00000585847 ARHGDIAP52565 204 aa11.71□□□□□ -0.53
VMP1-202ENST00000585847 ZNF155Q12901 538 aaPredicted RBP11.71□□□□□ -0.53
VMP1-202ENST00000585847 EPS8Q12929 822 aa11.71□□□□□ -0.53
VMP1-202ENST00000585847 LY6DQ14210 128 aa11.71□□□□□ -0.53
VMP1-202ENST00000585847 TRIP10Q15642 601 aa11.71□□□□□ -0.53
VMP1-202ENST00000585847 ARHGAP11BQ3KRB8 267 aa11.71□□□□□ -0.53
VMP1-202ENST00000585847 CYBRD1Q53TN4 286 aa11.71□□□□□ -0.53
VMP1-202ENST00000585847 CMPK2Q5EBM0 449 aa11.71□□□□□ -0.53
VMP1-202ENST00000585847 OGFRL1Q5TC84 451 aaPredicted RBP11.71□□□□□ -0.53
VMP1-202ENST00000585847 RAB43Q86YS6 212 aa11.71□□□□□ -0.53
VMP1-202ENST00000585847 NFKBIDQ8NI38 313 aa11.71□□□□□ -0.53
VMP1-202ENST00000585847 PTPMT1Q8WUK0 201 aaPredicted RBP11.71□□□□□ -0.53
VMP1-202ENST00000585847 PROX1Q92786 737 aa11.71□□□□□ -0.53
VMP1-202ENST00000585847 NRBF2Q96F24 287 aa11.71□□□□□ -0.53
VMP1-202ENST00000585847 OR7D2Q96RA2 312 aa11.71□□□□□ -0.53
VMP1-202ENST00000585847 TREX2Q9BQ50 279 aaPredicted RBP11.71□□□□□ -0.53
VMP1-202ENST00000585847 PIF1Q9H611 641 aa11.71□□□□□ -0.53
VMP1-202ENST00000585847 MTHFD2LQ9H903 347 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms