RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 ADGRG4Q8IZF6 3080 aa11.28□□□□□ -0.6
SS18-225ENST00000585121 LRBAP50851 2863 aa11.27□□□□□ -0.61
SS18-225ENST00000585121 DVL2O14641 736 aa11.27□□□□□ -0.61
SS18-225ENST00000585121 TM9SF1O15321 606 aa11.27□□□□□ -0.61
SS18-225ENST00000585121 PSMG1O95456 288 aa11.27□□□□□ -0.61
SS18-225ENST00000585121 HSPA4LO95757 839 aa11.27□□□□□ -0.61
SS18-225ENST00000585121 CYP4B1P13584 511 aa11.27□□□□□ -0.61
SS18-225ENST00000585121 CREB1P16220 341 aa11.27□□□□□ -0.61
SS18-225ENST00000585121 GRK2P25098 689 aa11.27□□□□□ -0.61
SS18-225ENST00000585121 MSX1P28360 303 aa11.27□□□□□ -0.61
SS18-225ENST00000585121 GABRA3P34903 492 aa11.27□□□□□ -0.61
SS18-225ENST00000585121 EVI2BP34910 448 aa11.27□□□□□ -0.61
SS18-225ENST00000585121 TIMP3P35625 211 aa11.27□□□□□ -0.61
SS18-225ENST00000585121 ADH7P40394 386 aa11.27□□□□□ -0.61
SS18-225ENST00000585121 RFX3P48380 749 aa11.27□□□□□ -0.61
SS18-225ENST00000585121 SERPINB4P48594 390 aa11.27□□□□□ -0.61
SS18-225ENST00000585121 PRKAG1P54619 331 aa11.27□□□□□ -0.61
SS18-225ENST00000585121 ZNF844Q08AG5 666 aa11.27□□□□□ -0.61
SS18-225ENST00000585121 MAD2L1Q13257 205 aaPredicted RBP11.27□□□□□ -0.61
SS18-225ENST00000585121 IFNEQ86WN2 208 aa11.27□□□□□ -0.61
SS18-225ENST00000585121 NATD1Q8N6N6 113 aa11.27□□□□□ -0.61
SS18-225ENST00000585121 WDSUB1Q8N9V3 476 aa11.27□□□□□ -0.61
SS18-225ENST00000585121 FNDC5Q8NAU1 212 aa11.27□□□□□ -0.61
SS18-225ENST00000585121 NUP43Q8NFH3 380 aa11.27□□□□□ -0.61
SS18-225ENST00000585121 CIDECQ96AQ7 238 aaPredicted RBP11.27□□□□□ -0.61
SS18-225ENST00000585121 C14orf79Q96F83 325 aa11.27□□□□□ -0.61
SS18-225ENST00000585121 WDYHV1Q96HA8 205 aa11.27□□□□□ -0.61
SS18-225ENST00000585121 TRIB1Q96RU8 372 aa11.27□□□□□ -0.61
SS18-225ENST00000585121 LMF2Q9BU23 707 aaKnown RBP11.27□□□□□ -0.61
SS18-225ENST00000585121 SSU72Q9NP77 194 aaKnown RBP11.27□□□□□ -0.61
SS18-225ENST00000585121 ATAD3AQ9NVI7 634 aa11.27□□□□□ -0.61
SS18-225ENST00000585121 FAM53CQ9NYF3 392 aa11.27□□□□□ -0.61
SS18-225ENST00000585121 ZDHHC2Q9UIJ5 367 aa11.27□□□□□ -0.61
SS18-225ENST00000585121 ABCG2Q9UNQ0 655 aa11.27□□□□□ -0.61
SS18-225ENST00000585121 EIF3LQ9Y262 564 aaKnown RBP11.27□□□□□ -0.61
SS18-225ENST00000585121 MRPS18CQ9Y3D5 142 aaKnown RBP11.27□□□□□ -0.61
SS18-225ENST00000585121 APCP25054 2843 aa11.26□□□□□ -0.61
SS18-225ENST00000585121 WDR91A4D1P6 747 aa11.26□□□□□ -0.61
SS18-225ENST00000585121 H0Y3Z8 333 aa11.26□□□□□ -0.61
SS18-225ENST00000585121 BIRC5O15392 142 aa11.26□□□□□ -0.61
SS18-225ENST00000585121 EMC8O43402 210 aa11.26□□□□□ -0.61
SS18-225ENST00000585121 SCO2O43819 266 aa11.26□□□□□ -0.61
SS18-225ENST00000585121 SKAP2O75563 359 aaPredicted RBP11.26□□□□□ -0.61
SS18-225ENST00000585121 LYPLA1O75608 230 aaPredicted RBP11.26□□□□□ -0.61
SS18-225ENST00000585121 SNUPNO95149 360 aaKnown RBP11.26□□□□□ -0.61
SS18-225ENST00000585121 IL33O95760 270 aa11.26□□□□□ -0.61
SS18-225ENST00000585121 SERPINE1P05121 402 aa11.26□□□□□ -0.61
SS18-225ENST00000585121 DPP4P27487 766 aa11.26□□□□□ -0.61
SS18-225ENST00000585121 ETV4P43268 484 aa11.26□□□□□ -0.61
SS18-225ENST00000585121 DSCR4P56555 118 aaPredicted RBP11.26□□□□□ -0.61
SS18-225ENST00000585121 PRR5P85299 388 aa11.26□□□□□ -0.61
SS18-225ENST00000585121 TFF3Q07654 80 aa11.26□□□□□ -0.61
SS18-225ENST00000585121 PDE7AQ13946 482 aa11.26□□□□□ -0.61
SS18-225ENST00000585121 ZNF385BQ569K4 471 aa11.26□□□□□ -0.61
SS18-225ENST00000585121 XKR7Q5GH72 579 aa11.26□□□□□ -0.61
SS18-225ENST00000585121 CEP85LQ5SZL2 805 aa11.26□□□□□ -0.61
SS18-225ENST00000585121 NSUN5P2Q63ZY6 315 aa11.26□□□□□ -0.61
SS18-225ENST00000585121 OR5M10Q6IEU7 315 aa11.26□□□□□ -0.61
SS18-225ENST00000585121 TRIM42Q8IWZ5 723 aa11.26□□□□□ -0.61
SS18-225ENST00000585121 KIRREL3Q8IZU9 778 aa11.26□□□□□ -0.61
SS18-225ENST00000585121 ZNF295-AS1Q8N0V1 137 aa11.26□□□□□ -0.61
SS18-225ENST00000585121 CDRT4Q8N9R6 151 aa11.26□□□□□ -0.61
SS18-225ENST00000585121 GPR151Q8TDV0 419 aa11.26□□□□□ -0.61
SS18-225ENST00000585121 SLC9A6Q92581 669 aa11.26□□□□□ -0.61
SS18-225ENST00000585121 TUBGCP3Q96CW5 907 aa11.26□□□□□ -0.61
SS18-225ENST00000585121 SFXN2Q96NB2 322 aa11.26□□□□□ -0.61
SS18-225ENST00000585121 PTGES2Q9H7Z7 377 aa11.26□□□□□ -0.61
SS18-225ENST00000585121 CALHM2Q9HA72 323 aa11.26□□□□□ -0.61
SS18-225ENST00000585121 HHATLQ9HCP6 504 aa11.26□□□□□ -0.61
SS18-225ENST00000585121 KCNK9Q9NPC2 374 aa11.26□□□□□ -0.61
SS18-225ENST00000585121 PHF3Q92576 2039 aaKnown RBP11.26□□□□□ -0.61
SS18-225ENST00000585121 CD8B2A6NJW9 211 aa11.25□□□□□ -0.61
SS18-225ENST00000585121 SCAMP2O15127 329 aaKnown RBP11.25□□□□□ -0.61
SS18-225ENST00000585121 CPN1P15169 458 aa11.25□□□□□ -0.61
SS18-225ENST00000585121 CAPN3P20807 821 aa11.25□□□□□ -0.61
SS18-225ENST00000585121 PEX19P40855 299 aa11.25□□□□□ -0.61
SS18-225ENST00000585121 FRKP42685 505 aaPredicted RBP11.25□□□□□ -0.61
SS18-225ENST00000585121 TLE4Q04727 773 aa11.25□□□□□ -0.61
SS18-225ENST00000585121 SRYQ05066 204 aa11.25□□□□□ -0.61
SS18-225ENST00000585121 CHI3L2Q15782 390 aa11.25□□□□□ -0.61
SS18-225ENST00000585121 C6orf136Q5SQH8 315 aa11.25□□□□□ -0.61
SS18-225ENST00000585121 CPTPQ5TA50 214 aa11.25□□□□□ -0.61
SS18-225ENST00000585121 IL23RQ5VWK5 629 aa11.25□□□□□ -0.61
SS18-225ENST00000585121 EXOC3L1Q86VI1 746 aa11.25□□□□□ -0.61
SS18-225ENST00000585121 DMRTC2Q8IXT2 367 aaPredicted RBP11.25□□□□□ -0.61
SS18-225ENST00000585121 ACBD4Q8NC06 268 aa11.25□□□□□ -0.61
SS18-225ENST00000585121 TNIP2Q8NFZ5 429 aa11.25□□□□□ -0.61
SS18-225ENST00000585121 ZPLD1Q8TCW7 415 aa11.25□□□□□ -0.61
SS18-225ENST00000585121 RNF138Q8WVD3 245 aa11.25□□□□□ -0.61
SS18-225ENST00000585121 LURAP1Q96LR2 239 aa11.25□□□□□ -0.61
SS18-225ENST00000585121 MS4A4EQ96PG1 132 aa11.25□□□□□ -0.61
SS18-225ENST00000585121 TREX2Q9BQ50 279 aaPredicted RBP11.25□□□□□ -0.61
SS18-225ENST00000585121 TBL1XR1Q9BZK7 514 aa11.25□□□□□ -0.61
SS18-225ENST00000585121 DSN1Q9H410 356 aa11.25□□□□□ -0.61
SS18-225ENST00000585121 NPDC1Q9NQX5 325 aaPredicted RBP11.25□□□□□ -0.61
SS18-225ENST00000585121 FAM120CQ9NX05 1096 aaKnown RBP11.25□□□□□ -0.61
SS18-225ENST00000585121 ZNF629Q9UEG4 869 aaPredicted RBP11.25□□□□□ -0.61
SS18-225ENST00000585121 ATP6V1HQ9UI12 483 aa11.25□□□□□ -0.61
SS18-225ENST00000585121 FBXL2Q9UKC9 423 aa11.25□□□□□ -0.61
SS18-225ENST00000585121 A0A1W2PRB8 838 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms