RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 PTOV1Q86YD1 416 aa16.89■□□□□ 0.29
RFFL-211ENST00000584541 GPALPP1Q8IXQ4 340 aa16.89■□□□□ 0.29
RFFL-211ENST00000584541 ZZZ3Q8IYH5 903 aa16.89■□□□□ 0.29
RFFL-211ENST00000584541 MICU2Q8IYU8 434 aa16.89■□□□□ 0.29
RFFL-211ENST00000584541 RNF148Q8N7C7 305 aa16.89■□□□□ 0.29
RFFL-211ENST00000584541 FDCSPQ8NFU4 85 aa16.89■□□□□ 0.29
RFFL-211ENST00000584541 NFKBIDQ8NI38 313 aa16.89■□□□□ 0.29
RFFL-211ENST00000584541 FAM110BQ8TC76 370 aa16.89■□□□□ 0.29
RFFL-211ENST00000584541 SLC38A5Q8WUX1 472 aa16.89■□□□□ 0.29
RFFL-211ENST00000584541 DIO2Q92813 273 aa16.89■□□□□ 0.29
RFFL-211ENST00000584541 MAL2Q969L2 176 aa16.89■□□□□ 0.29
RFFL-211ENST00000584541 SDF2Q99470 211 aa16.89■□□□□ 0.29
RFFL-211ENST00000584541 POLE3Q9NRF9 147 aa16.89■□□□□ 0.29
RFFL-211ENST00000584541 WDR45Q9Y484 360 aa16.89■□□□□ 0.29
RFFL-211ENST00000584541 PRORSD1PA6NEY8 169 aa16.88■□□□□ 0.29
RFFL-211ENST00000584541 GSTA4O15217 222 aa16.88■□□□□ 0.29
RFFL-211ENST00000584541 GSC2O15499 205 aa16.88■□□□□ 0.29
RFFL-211ENST00000584541 MAN1A2O60476 641 aa16.88■□□□□ 0.29
RFFL-211ENST00000584541 GMNNO75496 209 aa16.88■□□□□ 0.29
RFFL-211ENST00000584541 PPM1BO75688 479 aa16.88■□□□□ 0.29
RFFL-211ENST00000584541 CEACAM4O75871 244 aa16.88■□□□□ 0.29
RFFL-211ENST00000584541 FBXO45P0C2W1 286 aa16.88■□□□□ 0.29
RFFL-211ENST00000584541 HSD17B1P14061 328 aa16.88■□□□□ 0.29
RFFL-211ENST00000584541 LCN1P31025 176 aa16.88■□□□□ 0.29
RFFL-211ENST00000584541 PCGF2P35227 344 aa16.88■□□□□ 0.29
RFFL-211ENST00000584541 PGM1P36871 562 aa16.88■□□□□ 0.29
RFFL-211ENST00000584541 SOX3P41225 446 aa16.88■□□□□ 0.29
RFFL-211ENST00000584541 PNLIPRP2P54317 469 aa16.88■□□□□ 0.29
RFFL-211ENST00000584541 EFR3AQ14156 821 aa16.88■□□□□ 0.29
RFFL-211ENST00000584541 ADRM1Q16186 407 aa16.88■□□□□ 0.29
RFFL-211ENST00000584541 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.88■□□□□ 0.29
RFFL-211ENST00000584541 INTS11Q5TA45 600 aaKnown RBP16.88■□□□□ 0.29
RFFL-211ENST00000584541 PRAMEF8Q5VWM4 474 aa16.88■□□□□ 0.29
RFFL-211ENST00000584541 PRAMEF7Q5VXH5 474 aa16.88■□□□□ 0.29
RFFL-211ENST00000584541 LRRC74BQ6ZQY2 392 aa16.88■□□□□ 0.29
RFFL-211ENST00000584541 LINC00696Q6ZRV3 163 aa16.88■□□□□ 0.29
RFFL-211ENST00000584541 BEST3Q8N1M1 668 aa16.88■□□□□ 0.29
RFFL-211ENST00000584541 ANKFN1Q8N957 763 aa16.88■□□□□ 0.29
RFFL-211ENST00000584541 HIPK4Q8NE63 616 aa16.88■□□□□ 0.29
RFFL-211ENST00000584541 EFHD2Q96C19 240 aaPredicted RBP16.88■□□□□ 0.29
RFFL-211ENST00000584541 SPACA9Q96E40 222 aaPredicted RBP16.88■□□□□ 0.29
RFFL-211ENST00000584541 TMEM19Q96HH6 336 aa16.88■□□□□ 0.29
RFFL-211ENST00000584541 COL21A1Q96P44 957 aa16.88■□□□□ 0.29
RFFL-211ENST00000584541 LMF1Q96S06 567 aa16.88■□□□□ 0.29
RFFL-211ENST00000584541 ADOQ96SZ5 270 aa16.88■□□□□ 0.29
RFFL-211ENST00000584541 MMADHCQ9H3L0 296 aaPredicted RBP16.88■□□□□ 0.29
RFFL-211ENST00000584541 ZNF552Q9H707 407 aaPredicted RBP16.88■□□□□ 0.29
RFFL-211ENST00000584541 CACYBPQ9HB71 228 aaKnown RBP16.88■□□□□ 0.29
RFFL-211ENST00000584541 HPF1Q9NWY4 346 aa16.88■□□□□ 0.29
RFFL-211ENST00000584541 PACSIN3Q9UKS6 424 aa16.88■□□□□ 0.29
RFFL-211ENST00000584541 ZMIZ1Q9ULJ6 1067 aa16.88■□□□□ 0.29
RFFL-211ENST00000584541 FREM2Q5SZK8 3169 aa16.88■□□□□ 0.29
RFFL-211ENST00000584541 CHD8Q9HCK8 2581 aa16.87■□□□□ 0.29
RFFL-211ENST00000584541 A0A0G2JPF8 293 aa16.87■□□□□ 0.29
RFFL-211ENST00000584541 ERICH4A6NGS2 130 aa16.87■□□□□ 0.29
RFFL-211ENST00000584541 OR6C70A6NIJ9 312 aa16.87■□□□□ 0.29
RFFL-211ENST00000584541 HNRNPCL2B2RXH8 293 aa16.87■□□□□ 0.29
RFFL-211ENST00000584541 HNRNPCL3B7ZW38 293 aa16.87■□□□□ 0.29
RFFL-211ENST00000584541 TP53I11O14683 189 aa16.87■□□□□ 0.29
RFFL-211ENST00000584541 TSPAN2O60636 221 aa16.87■□□□□ 0.29
RFFL-211ENST00000584541 H6PDO95479 791 aa16.87■□□□□ 0.29
RFFL-211ENST00000584541 ITGB2P05107 769 aa16.87■□□□□ 0.29
RFFL-211ENST00000584541 GUSBP08236 651 aa16.87■□□□□ 0.29
RFFL-211ENST00000584541 HNRNPCL4P0DMR1 293 aa16.87■□□□□ 0.29
RFFL-211ENST00000584541 TCN1P20061 433 aaPredicted RBP16.87■□□□□ 0.29
RFFL-211ENST00000584541 ME2P23368 584 aa16.87■□□□□ 0.29
RFFL-211ENST00000584541 HTR1EP28566 365 aa16.87■□□□□ 0.29
RFFL-211ENST00000584541 RPP38P78345 283 aaKnown RBP16.87■□□□□ 0.29
RFFL-211ENST00000584541 FUT5Q11128 374 aa16.87■□□□□ 0.29
RFFL-211ENST00000584541 MFAP5Q13361 173 aa16.87■□□□□ 0.29
RFFL-211ENST00000584541 VEZF1Q14119 521 aa16.87■□□□□ 0.29
RFFL-211ENST00000584541 IL20RBQ6UXL0 311 aa16.87■□□□□ 0.29
RFFL-211ENST00000584541 NUP54Q7Z3B4 507 aa16.87■□□□□ 0.29
RFFL-211ENST00000584541 BBS10Q8TAM1 723 aa16.87■□□□□ 0.29
RFFL-211ENST00000584541 PMM1Q92871 262 aa16.87■□□□□ 0.29
RFFL-211ENST00000584541 UTP23Q9BRU9 249 aaKnown RBP16.87■□□□□ 0.29
RFFL-211ENST00000584541 CADM1Q9BY67 442 aaKnown RBP16.87■□□□□ 0.29
RFFL-211ENST00000584541 ZNF350Q9GZX5 532 aa16.87■□□□□ 0.29
RFFL-211ENST00000584541 HOXD1Q9GZZ0 328 aa16.87■□□□□ 0.29
RFFL-211ENST00000584541 ZBTB20Q9HC78 741 aaPredicted RBP16.87■□□□□ 0.29
RFFL-211ENST00000584541 CD300AQ9UGN4 299 aa16.87■□□□□ 0.29
RFFL-211ENST00000584541 KMT2BQ9UMN6 2715 aaPredicted RBP16.87■□□□□ 0.29
RFFL-211ENST00000584541 MAP1BP46821 2468 aaKnown RBP16.86■□□□□ 0.29
RFFL-211ENST00000584541 PRAMEF27A3QJZ7 478 aa16.86■□□□□ 0.29
RFFL-211ENST00000584541 MKRN2OSH3BPM6 223 aa16.86■□□□□ 0.29
RFFL-211ENST00000584541 ZNF354AO60765 605 aaPredicted RBP16.86■□□□□ 0.29
RFFL-211ENST00000584541 PDE9AO76083 593 aa16.86■□□□□ 0.29
RFFL-211ENST00000584541 OR6B1O95007 311 aa16.86■□□□□ 0.29
RFFL-211ENST00000584541 STAMBPO95630 424 aa16.86■□□□□ 0.29
RFFL-211ENST00000584541 IGKV1D-16P01601 117 aa16.86■□□□□ 0.29
RFFL-211ENST00000584541 CHRM4P08173 479 aa16.86■□□□□ 0.29
RFFL-211ENST00000584541 CYB561P49447 251 aa16.86■□□□□ 0.29
RFFL-211ENST00000584541 HLCSP50747 726 aa16.86■□□□□ 0.29
RFFL-211ENST00000584541 OC90Q02509 493 aaPredicted RBP16.86■□□□□ 0.29
RFFL-211ENST00000584541 BNIP2Q12982 314 aa16.86■□□□□ 0.29
RFFL-211ENST00000584541 CEACAM7Q14002 265 aa16.86■□□□□ 0.29
RFFL-211ENST00000584541 GPR68Q15743 365 aa16.86■□□□□ 0.29
RFFL-211ENST00000584541 NTRK2Q16620 822 aa16.86■□□□□ 0.29
RFFL-211ENST00000584541 TBR1Q16650 682 aa16.86■□□□□ 0.29
RFFL-211ENST00000584541 FLYWCH1Q4VC44 716 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms