RNA–Protein interactions for RNA: ENST00000584250.1

TTC39C-209, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 1 (best) BASIC

Gene TTC39C, Length 1,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-209ENST00000584250 HMGB1P1B2RPK0 211 aaPredicted RBP22.69■■□□□ 1.22
TTC39C-209ENST00000584250 SNPHO15079 494 aa22.69■■□□□ 1.22
TTC39C-209ENST00000584250 SCN2BO60939 215 aa22.69■■□□□ 1.22
TTC39C-209ENST00000584250 KRT20P35900 424 aa22.69■■□□□ 1.22
TTC39C-209ENST00000584250 MAN2A2P49641 1150 aa22.69■■□□□ 1.22
TTC39C-209ENST00000584250 PER3P56645 1201 aa22.69■■□□□ 1.22
TTC39C-209ENST00000584250 UFM1P61960 85 aa22.69■■□□□ 1.22
TTC39C-209ENST00000584250 HBA1P69905 142 aa22.69■■□□□ 1.22
TTC39C-209ENST00000584250 CDSNQ15517 529 aa22.69■■□□□ 1.22
TTC39C-209ENST00000584250 ZNHIT3Q15649 155 aaPredicted RBP22.69■■□□□ 1.22
TTC39C-209ENST00000584250 OR5M10Q6IEU7 315 aa22.69■■□□□ 1.22
TTC39C-209ENST00000584250 PAOXQ6QHF9 649 aa22.69■■□□□ 1.22
TTC39C-209ENST00000584250 ZAR1Q86SH2 424 aa22.69■■□□□ 1.22
TTC39C-209ENST00000584250 MARVELD2Q8N4S9 558 aa22.69■■□□□ 1.22
TTC39C-209ENST00000584250 OR5AK3PQ8NH89 298 aa22.69■■□□□ 1.22
TTC39C-209ENST00000584250 CEP70Q8NHQ1 597 aa22.69■■□□□ 1.22
TTC39C-209ENST00000584250 PSMA8Q8TAA3 256 aa22.69■■□□□ 1.22
TTC39C-209ENST00000584250 GPR151Q8TDV0 419 aa22.69■■□□□ 1.22
TTC39C-209ENST00000584250 TMCO6Q96DC7 493 aa22.69■■□□□ 1.22
TTC39C-209ENST00000584250 OR52B2Q96RD2 323 aa22.69■■□□□ 1.22
TTC39C-209ENST00000584250 DMRTA2Q96SC8 542 aa22.69■■□□□ 1.22
TTC39C-209ENST00000584250 PRPF18Q99633 342 aaKnown RBP22.69■■□□□ 1.22
TTC39C-209ENST00000584250 C3orf14Q9HBI5 128 aa22.69■■□□□ 1.22
TTC39C-209ENST00000584250 AIG1Q9NVV5 245 aa22.69■■□□□ 1.22
TTC39C-209ENST00000584250 AQP7O14520 342 aa22.68■■□□□ 1.22
TTC39C-209ENST00000584250 SUSD5O60279 629 aa22.68■■□□□ 1.22
TTC39C-209ENST00000584250 ABCB7O75027 752 aa22.68■■□□□ 1.22
TTC39C-209ENST00000584250 TRAPPC6AO75865 159 aa22.68■■□□□ 1.22
TTC39C-209ENST00000584250 IL33O95760 270 aa22.68■■□□□ 1.22
TTC39C-209ENST00000584250 HMGN2P05204 90 aaKnown RBP22.68■■□□□ 1.22
TTC39C-209ENST00000584250 IL12AP29459 219 aa22.68■■□□□ 1.22
TTC39C-209ENST00000584250 CCT3P49368 545 aaKnown RBP22.68■■□□□ 1.22
TTC39C-209ENST00000584250 MRPS22P82650 360 aaKnown RBP22.68■■□□□ 1.22
TTC39C-209ENST00000584250 EFR3AQ14156 821 aa22.68■■□□□ 1.22
TTC39C-209ENST00000584250 LASP1Q14847 261 aaKnown RBP22.68■■□□□ 1.22
TTC39C-209ENST00000584250 DECR1Q16698 335 aa22.68■■□□□ 1.22
TTC39C-209ENST00000584250 GXYLT1Q4G148 440 aa22.68■■□□□ 1.22
TTC39C-209ENST00000584250 EIPR1Q53HC9 387 aa22.68■■□□□ 1.22
TTC39C-209ENST00000584250 ANKRD46Q86W74 232 aa22.68■■□□□ 1.22
TTC39C-209ENST00000584250 CDRT4Q8N9R6 151 aa22.68■■□□□ 1.22
TTC39C-209ENST00000584250 OR1J4Q8NGS1 313 aa22.68■■□□□ 1.22
TTC39C-209ENST00000584250 PIWIL2Q8TC59 973 aaKnown RBP22.68■■□□□ 1.22
TTC39C-209ENST00000584250 EXO5Q9H790 373 aa22.68■■□□□ 1.22
TTC39C-209ENST00000584250 ACKR4Q9NPB9 350 aa22.68■■□□□ 1.22
TTC39C-209ENST00000584250 QPCTLQ9NXS2 382 aa22.68■■□□□ 1.22
TTC39C-209ENST00000584250 SLC6A5Q9Y345 797 aa22.68■■□□□ 1.22
TTC39C-209ENST00000584250 PCNX3Q9H6A9 2034 aa22.68■■□□□ 1.22
TTC39C-209ENST00000584250 TRPC5OSA6NMA1 111 aa22.67■■□□□ 1.22
TTC39C-209ENST00000584250 CFLARO15519 480 aa22.67■■□□□ 1.22
TTC39C-209ENST00000584250 SCO2O43819 266 aa22.67■■□□□ 1.22
TTC39C-209ENST00000584250 FADS1O60427 444 aa22.67■■□□□ 1.22
TTC39C-209ENST00000584250 ESRRAP11474 423 aaPredicted RBP22.67■■□□□ 1.22
TTC39C-209ENST00000584250 PPP2R2AP63151 447 aa22.67■■□□□ 1.22
TTC39C-209ENST00000584250 SNTA1Q13424 505 aa22.67■■□□□ 1.22
TTC39C-209ENST00000584250 TP53BP2Q13625 1128 aa22.67■■□□□ 1.22
TTC39C-209ENST00000584250 SPANXN4Q5MJ08 99 aa22.67■■□□□ 1.22
TTC39C-209ENST00000584250 WIPI1Q5MNZ9 446 aaPredicted RBP22.67■■□□□ 1.22
TTC39C-209ENST00000584250 YRDCQ86U90 279 aaKnown RBP22.67■■□□□ 1.22
TTC39C-209ENST00000584250 LRRC34Q8IZ02 419 aa22.67■■□□□ 1.22
TTC39C-209ENST00000584250 GOLGA6L1Q8N7Z2 621 aa22.67■■□□□ 1.22
TTC39C-209ENST00000584250 NEIL3Q8TAT5 605 aa22.67■■□□□ 1.22
TTC39C-209ENST00000584250 MAELQ96JY0 434 aaKnown RBP22.67■■□□□ 1.22
TTC39C-209ENST00000584250 GPATCH2Q9NW75 528 aa22.67■■□□□ 1.22
TTC39C-209ENST00000584250 B4GALT7Q9UBV7 327 aa22.67■■□□□ 1.22
TTC39C-209ENST00000584250 FBXL2Q9UKC9 423 aa22.67■■□□□ 1.22
TTC39C-209ENST00000584250 WIF1Q9Y5W5 379 aa22.67■■□□□ 1.22
TTC39C-209ENST00000584250 GPR45Q9Y5Y3 372 aa22.67■■□□□ 1.22
TTC39C-209ENST00000584250 KCNE3Q9Y6H6 103 aa22.67■■□□□ 1.22
TTC39C-209ENST00000584250 HCN1O60741 890 aa22.66■■□□□ 1.22
TTC39C-209ENST00000584250 C1QCP02747 245 aa22.66■■□□□ 1.22
TTC39C-209ENST00000584250 HPNP05981 417 aa22.66■■□□□ 1.22
TTC39C-209ENST00000584250 DDX5P17844 614 aaKnown RBP22.66■■□□□ 1.22
TTC39C-209ENST00000584250 EVI2BP34910 448 aa22.66■■□□□ 1.22
TTC39C-209ENST00000584250 TOMM20Q15388 145 aa22.66■■□□□ 1.22
TTC39C-209ENST00000584250 LSM12Q3MHD2 195 aaKnown RBP22.66■■□□□ 1.22
TTC39C-209ENST00000584250 CCNJQ5T5M9 372 aa22.66■■□□□ 1.22
TTC39C-209ENST00000584250 NXNQ6DKJ4 435 aa22.66■■□□□ 1.22
TTC39C-209ENST00000584250 FIGNL1Q6PIW4 674 aa22.66■■□□□ 1.22
TTC39C-209ENST00000584250 APOOLQ6UXV4 268 aa22.66■■□□□ 1.22
TTC39C-209ENST00000584250 OR8J2Q8NGG1 315 aa22.66■■□□□ 1.22
TTC39C-209ENST00000584250 JADE3Q92613 823 aa22.66■■□□□ 1.22
TTC39C-209ENST00000584250 TESCQ96BS2 214 aa22.66■■□□□ 1.22
TTC39C-209ENST00000584250 SUCOQ9UBS9 1254 aaKnown RBP22.66■■□□□ 1.22
TTC39C-209ENST00000584250 USH1CQ9Y6N9 552 aa22.66■■□□□ 1.22
TTC39C-209ENST00000584250 E9PLN8 166 aa22.65■■□□□ 1.22
TTC39C-209ENST00000584250 SLCO1B7G3V0H7 640 aa22.65■■□□□ 1.22
TTC39C-209ENST00000584250 GP1BBP13224 206 aa22.65■■□□□ 1.22
TTC39C-209ENST00000584250 KIR3DL1P43629 444 aa22.65■■□□□ 1.22
TTC39C-209ENST00000584250 DGKQP52824 942 aa22.65■■□□□ 1.22
TTC39C-209ENST00000584250 PSPHP78330 225 aa22.65■■□□□ 1.22
TTC39C-209ENST00000584250 PRR5P85299 388 aa22.65■■□□□ 1.22
TTC39C-209ENST00000584250 GRAMD1BQ3KR37 738 aa22.65■■□□□ 1.22
TTC39C-209ENST00000584250 FAM174BQ3ZCQ3 159 aa22.65■■□□□ 1.22
TTC39C-209ENST00000584250 SPDYE7PQ495Y7 208 aa22.65■■□□□ 1.22
TTC39C-209ENST00000584250 MAMDC2Q7Z304 686 aaPredicted RBP22.65■■□□□ 1.22
TTC39C-209ENST00000584250 SPATA19Q7Z5L4 167 aa22.65■■□□□ 1.22
TTC39C-209ENST00000584250 MRGPRGQ86SM5 289 aa22.65■■□□□ 1.22
TTC39C-209ENST00000584250 MARCH3Q86UD3 253 aa22.65■■□□□ 1.22
TTC39C-209ENST00000584250 FAM83FQ8NEG4 500 aaPredicted RBP22.65■■□□□ 1.22
TTC39C-209ENST00000584250 FAM110BQ8TC76 370 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms