RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 OR1A2Q9Y585 309 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 PCDHGA6Q9Y5G7 932 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 PCDHGA4Q9Y5G9 962 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 NOX1Q9Y5S8 564 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 SCN1AP35498 2009 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 LINC01553A4QN01 128 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 METTL21EPA6NDL7 271 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 SEMA4FO95754 770 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 CISD3P0C7P0 127 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 GSTT2P0CG29 244 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 AGXTP21549 392 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 STOMP27105 288 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 PDHA2P29803 388 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 CDKN2CP42773 168 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 B4GALNT1Q00973 533 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 TAF13Q15543 124 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 SMARCD3Q6STE5 483 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 USP53Q70EK8 1073 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 MEPCEQ7L2J0 689 aaKnown RBP5.5□□□□□ -1.53
RTTN-209ENST00000583043 TRIM74Q86UV6 250 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 PLCZ1Q86YW0 608 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 OR4C15Q8NGM1 316 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 ASB13Q8WXK3 278 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 HYLS1Q96M11 299 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 IL17FQ96PD4 163 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 TTYH2Q9BSA4 534 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 SOX17Q9H6I2 414 aaPredicted RBP5.5□□□□□ -1.53
RTTN-209ENST00000583043 AMBNQ9NP70 447 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 SLC52A3Q9NQ40 469 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 C19orf53Q9UNZ5 99 aaPredicted RBP5.5□□□□□ -1.53
RTTN-209ENST00000583043 GJB3O75712 270 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 RBMS1P29558 406 aaKnown RBP5.5□□□□□ -1.53
RTTN-209ENST00000583043 IST1P53990 364 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 IDNKQ5T6J7 187 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 GLT8D1Q68CQ7 371 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 C1orf94Q6P1W5 598 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 RPL22L1Q6P5R6 122 aaKnown RBP5.5□□□□□ -1.53
RTTN-209ENST00000583043 PODNL1Q6PEZ8 512 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 PLXDC1Q8IUK5 500 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 ASB17Q8WXJ9 295 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 TCTN2Q96GX1 697 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 OR7D2Q96RA2 312 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 KCNS3Q9BQ31 491 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 SAP130Q9H0E3 1048 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 CAPN10Q9HC96 672 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 UCKL1Q9NWZ5 548 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 BABAM2Q9NXR7 383 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 PCDH10Q9P2E7 1040 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 ZNF443Q9Y2A4 671 aaPredicted RBP5.5□□□□□ -1.53
RTTN-209ENST00000583043 SLC17A4Q9Y2C5 497 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 INMT-MINDY4F8WBC2 141 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 PLOD2O00469 737 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 YKT6O15498 198 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 BSGP35613 385 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 SRP54P61011 504 aaKnown RBP5.5□□□□□ -1.53
RTTN-209ENST00000583043 HNRNPA0Q13151 305 aaKnown RBP5.5□□□□□ -1.53
RTTN-209ENST00000583043 CCDC58Q4VC31 144 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 ARMCX6Q7L4S7 300 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 MSRB3Q8IXL7 192 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 NANOGP1Q8N7R0 232 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 OR8K5Q8NH50 307 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 ZNF417Q8TAU3 575 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 JPH3Q8WXH2 748 aaPredicted RBP5.5□□□□□ -1.53
RTTN-209ENST00000583043 HAVCR1Q96D42 359 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 MRGPRX3Q96LB0 322 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 ZSWIM3Q96MP5 696 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 SEMA4CQ9C0C4 833 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 TPK1Q9H3S4 243 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 CXorf36Q9H7Y0 433 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 SMCHD1A6NHR9 2005 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 CSTAP01040 98 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 HLA-DQA2P01906 255 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 RAB40ALP0C0E4 278 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 TFPTP0C1Z6 253 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 OPRD1P41143 372 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 WASP42768 502 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 NCS1P62166 190 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 RASGEF1BQ0VAM2 473 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 TPBGQ13641 420 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 ARHGAP11BQ3KRB8 267 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 GTF2IRD2BQ6EKJ0 949 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 ANKRD54Q6NXT1 300 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 PGBD2Q6P3X8 592 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 TMEM107Q6UX40 140 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 FRRS1Q6ZNA5 592 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 MAMDC2Q7Z304 686 aaPredicted RBP5.5□□□□□ -1.53
RTTN-209ENST00000583043 GTF2IRD2Q86UP8 949 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 C2orf73Q8N5S3 287 aaPredicted RBP5.5□□□□□ -1.53
RTTN-209ENST00000583043 DYNC2LI1Q8TCX1 351 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 BRIX1Q8TDN6 353 aaKnown RBP5.5□□□□□ -1.53
RTTN-209ENST00000583043 FBLIM1Q8WUP2 373 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 RAB40AQ8WXH6 277 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 THAP4Q8WY91 577 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 TCEAL4Q96EI5 215 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 C7orf34Q96L11 122 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 GON7Q9BXV9 100 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 TRIM8Q9BZR9 551 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 TEX10Q9NXF1 929 aaPredicted RBP5.5□□□□□ -1.53
RTTN-209ENST00000583043 COMMD3Q9UBI1 195 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 GRHPRQ9UBQ7 328 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms