RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 TNFRSF10DQ9UBN6 386 aa11.52□□□□□ -0.57
SMARCE1-218ENST00000582955 DIDO1Q9BTC0 2240 aaKnown RBP11.52□□□□□ -0.57
SMARCE1-218ENST00000582955 ZNF407Q9C0G0 2248 aa11.51□□□□□ -0.57
SMARCE1-218ENST00000582955 A0A1B0GVC2 190 aa11.51□□□□□ -0.57
SMARCE1-218ENST00000582955 OR14I1A6ND48 311 aa11.51□□□□□ -0.57
SMARCE1-218ENST00000582955 BCKDKO14874 412 aa11.51□□□□□ -0.57
SMARCE1-218ENST00000582955 SCO2O43819 266 aa11.51□□□□□ -0.57
SMARCE1-218ENST00000582955 HCN1O60741 890 aa11.51□□□□□ -0.57
SMARCE1-218ENST00000582955 DIAPH2O60879 1101 aa11.51□□□□□ -0.57
SMARCE1-218ENST00000582955 NKX2-2O95096 273 aa11.51□□□□□ -0.57
SMARCE1-218ENST00000582955 IL33O95760 270 aa11.51□□□□□ -0.57
SMARCE1-218ENST00000582955 HMGN2P05204 90 aaKnown RBP11.51□□□□□ -0.57
SMARCE1-218ENST00000582955 ALOX5P09917 674 aa11.51□□□□□ -0.57
SMARCE1-218ENST00000582955 PTPN6P29350 595 aa11.51□□□□□ -0.57
SMARCE1-218ENST00000582955 EVI2BP34910 448 aa11.51□□□□□ -0.57
SMARCE1-218ENST00000582955 CLNS1AP54105 237 aaKnown RBP11.51□□□□□ -0.57
SMARCE1-218ENST00000582955 HBA1P69905 142 aa11.51□□□□□ -0.57
SMARCE1-218ENST00000582955 LASP1Q14847 261 aaKnown RBP11.51□□□□□ -0.57
SMARCE1-218ENST00000582955 DUSP5Q16690 384 aa11.51□□□□□ -0.57
SMARCE1-218ENST00000582955 SLC9B1Q4ZJI4 515 aa11.51□□□□□ -0.57
SMARCE1-218ENST00000582955 ZCCHC12Q6PEW1 402 aa11.51□□□□□ -0.57
SMARCE1-218ENST00000582955 MAVSQ7Z434 540 aa11.51□□□□□ -0.57
SMARCE1-218ENST00000582955 GALNT10Q86SR1 603 aa11.51□□□□□ -0.57
SMARCE1-218ENST00000582955 CLECL1Q8IZS7 167 aa11.51□□□□□ -0.57
SMARCE1-218ENST00000582955 COX18Q8N8Q8 333 aa11.51□□□□□ -0.57
SMARCE1-218ENST00000582955 SLC16A11Q8NCK7 471 aa11.51□□□□□ -0.57
SMARCE1-218ENST00000582955 OR8J2Q8NGG1 315 aa11.51□□□□□ -0.57
SMARCE1-218ENST00000582955 OR56A1Q8NGH5 318 aa11.51□□□□□ -0.57
SMARCE1-218ENST00000582955 OR4A15Q8NGL6 344 aa11.51□□□□□ -0.57
SMARCE1-218ENST00000582955 OR5AK3PQ8NH89 298 aa11.51□□□□□ -0.57
SMARCE1-218ENST00000582955 NEIL3Q8TAT5 605 aa11.51□□□□□ -0.57
SMARCE1-218ENST00000582955 SARAFQ96BY9 339 aa11.51□□□□□ -0.57
SMARCE1-218ENST00000582955 MARK4Q96L34 752 aa11.51□□□□□ -0.57
SMARCE1-218ENST00000582955 C7orf26Q96N11 449 aa11.51□□□□□ -0.57
SMARCE1-218ENST00000582955 HS3ST6Q96QI5 342 aa11.51□□□□□ -0.57
SMARCE1-218ENST00000582955 TP63Q9H3D4 680 aaPredicted RBP11.51□□□□□ -0.57
SMARCE1-218ENST00000582955 ACKR4Q9NPB9 350 aa11.51□□□□□ -0.57
SMARCE1-218ENST00000582955 SLCO1B3Q9NPD5 702 aa11.51□□□□□ -0.57
SMARCE1-218ENST00000582955 SERHLQ9NQF3 203 aa11.51□□□□□ -0.57
SMARCE1-218ENST00000582955 FLRT3Q9NZU0 649 aa11.51□□□□□ -0.57
SMARCE1-218ENST00000582955 SPRR3Q9UBC9 169 aa11.51□□□□□ -0.57
SMARCE1-218ENST00000582955 PLEKHB1Q9UF11 243 aaPredicted RBP11.51□□□□□ -0.57
SMARCE1-218ENST00000582955 ACAD8Q9UKU7 415 aa11.51□□□□□ -0.57
SMARCE1-218ENST00000582955 PCDHGB4Q9UN71 923 aa11.51□□□□□ -0.57
SMARCE1-218ENST00000582955 FAF1Q9UNN5 650 aaPredicted RBP11.51□□□□□ -0.57
SMARCE1-218ENST00000582955 MEMO1Q9Y316 297 aa11.51□□□□□ -0.57
SMARCE1-218ENST00000582955 WIF1Q9Y5W5 379 aa11.51□□□□□ -0.57
SMARCE1-218ENST00000582955 PTPN13Q12923 2485 aa11.51□□□□□ -0.57
SMARCE1-218ENST00000582955 GTF3C1Q12789 2109 aa11.51□□□□□ -0.57
SMARCE1-218ENST00000582955 MYO7BQ6PIF6 2116 aa11.51□□□□□ -0.57
SMARCE1-218ENST00000582955 ASH1LQ9NR48 2969 aaKnown RBP11.51□□□□□ -0.57
SMARCE1-218ENST00000582955 NCKAP5O14513 1909 aa11.5□□□□□ -0.57
SMARCE1-218ENST00000582955 HECTD1Q9ULT8 2610 aa11.5□□□□□ -0.57
SMARCE1-218ENST00000582955 C15orf38-AP3S2A0A0A6YYH1 394 aa11.5□□□□□ -0.57
SMARCE1-218ENST00000582955 C9JVG2 144 aa11.5□□□□□ -0.57
SMARCE1-218ENST00000582955 E9PBE3 544 aa11.5□□□□□ -0.57
SMARCE1-218ENST00000582955 E9PLN8 166 aa11.5□□□□□ -0.57
SMARCE1-218ENST00000582955 RNASET2O00584 256 aaKnown RBP11.5□□□□□ -0.57
SMARCE1-218ENST00000582955 ANKRD28O15084 1053 aa11.5□□□□□ -0.57
SMARCE1-218ENST00000582955 CPSF4O95639 269 aaKnown RBP11.5□□□□□ -0.57
SMARCE1-218ENST00000582955 KRT16P08779 473 aa11.5□□□□□ -0.57
SMARCE1-218ENST00000582955 ENDOUP21128 410 aaKnown RBP11.5□□□□□ -0.57
SMARCE1-218ENST00000582955 S100A3P33764 101 aa11.5□□□□□ -0.57
SMARCE1-218ENST00000582955 MAP3K8P41279 467 aa11.5□□□□□ -0.57
SMARCE1-218ENST00000582955 CLK3P49761 638 aaKnown RBP11.5□□□□□ -0.57
SMARCE1-218ENST00000582955 WNT3P56703 355 aa11.5□□□□□ -0.57
SMARCE1-218ENST00000582955 UFM1P61960 85 aa11.5□□□□□ -0.57
SMARCE1-218ENST00000582955 STX5Q13190 355 aa11.5□□□□□ -0.57
SMARCE1-218ENST00000582955 DPY19L1Q2PZI1 675 aa11.5□□□□□ -0.57
SMARCE1-218ENST00000582955 FAM174BQ3ZCQ3 159 aa11.5□□□□□ -0.57
SMARCE1-218ENST00000582955 GXYLT1Q4G148 440 aa11.5□□□□□ -0.57
SMARCE1-218ENST00000582955 SPANXN4Q5MJ08 99 aa11.5□□□□□ -0.57
SMARCE1-218ENST00000582955 WLSQ5T9L3 541 aa11.5□□□□□ -0.57
SMARCE1-218ENST00000582955 ANXA8L1Q5VT79 327 aa11.5□□□□□ -0.57
SMARCE1-218ENST00000582955 OR5M10Q6IEU7 315 aa11.5□□□□□ -0.57
SMARCE1-218ENST00000582955 ZNF585AQ6P3V2 769 aa11.5□□□□□ -0.57
SMARCE1-218ENST00000582955 BHLHB9Q6PI77 547 aa11.5□□□□□ -0.57
SMARCE1-218ENST00000582955 FIGNL1Q6PIW4 674 aa11.5□□□□□ -0.57
SMARCE1-218ENST00000582955 RPTNQ6XPR3 784 aa11.5□□□□□ -0.57
SMARCE1-218ENST00000582955 NCCRP1Q6ZVX7 275 aaPredicted RBP11.5□□□□□ -0.57
SMARCE1-218ENST00000582955 MRGPRGQ86SM5 289 aa11.5□□□□□ -0.57
SMARCE1-218ENST00000582955 ANKRD46Q86W74 232 aa11.5□□□□□ -0.57
SMARCE1-218ENST00000582955 PLCZ1Q86YW0 608 aa11.5□□□□□ -0.57
SMARCE1-218ENST00000582955 VPS37AQ8NEZ2 397 aa11.5□□□□□ -0.57
SMARCE1-218ENST00000582955 PSMA8Q8TAA3 256 aa11.5□□□□□ -0.57
SMARCE1-218ENST00000582955 SFXN5Q8TD22 340 aa11.5□□□□□ -0.57
SMARCE1-218ENST00000582955 ACTRT2Q8TDY3 377 aa11.5□□□□□ -0.57
SMARCE1-218ENST00000582955 HOXB13Q92826 284 aaPredicted RBP11.5□□□□□ -0.57
SMARCE1-218ENST00000582955 TESCQ96BS2 214 aa11.5□□□□□ -0.57
SMARCE1-218ENST00000582955 MOAP1Q96BY2 351 aa11.5□□□□□ -0.57
SMARCE1-218ENST00000582955 NTNG2Q96CW9 530 aa11.5□□□□□ -0.57
SMARCE1-218ENST00000582955 MAELQ96JY0 434 aaKnown RBP11.5□□□□□ -0.57
SMARCE1-218ENST00000582955 OR52B2Q96RD2 323 aa11.5□□□□□ -0.57
SMARCE1-218ENST00000582955 ZBTB18Q99592 522 aa11.5□□□□□ -0.57
SMARCE1-218ENST00000582955 VKORC1Q9BQB6 163 aa11.5□□□□□ -0.57
SMARCE1-218ENST00000582955 UBQLN3Q9H347 655 aa11.5□□□□□ -0.57
SMARCE1-218ENST00000582955 PNPLA3Q9NST1 481 aa11.5□□□□□ -0.57
SMARCE1-218ENST00000582955 ALKBH4Q9NXW9 302 aa11.5□□□□□ -0.57
SMARCE1-218ENST00000582955 PPP4R1LQ9P1A2 415 aa11.5□□□□□ -0.57
SMARCE1-218ENST00000582955 HRH3Q9Y5N1 445 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms