RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 DUSP8Q13202 625 aa21.12■□□□□ 0.97
CCDC47-204ENST00000582252 SLX4IPQ5VYV7 408 aa21.12■□□□□ 0.97
CCDC47-204ENST00000582252 CASP12Q6UXS9 341 aa21.12■□□□□ 0.97
CCDC47-204ENST00000582252 WDR53Q7Z5U6 358 aaPredicted RBP21.12■□□□□ 0.97
CCDC47-204ENST00000582252 HMGN2P46Q86SG4 172 aa21.12■□□□□ 0.97
CCDC47-204ENST00000582252 CCDC103Q8IW40 242 aa21.12■□□□□ 0.97
CCDC47-204ENST00000582252 ZNF619Q8N2I2 560 aa21.12■□□□□ 0.97
CCDC47-204ENST00000582252 TOR1AIP2Q8NFQ8 470 aa21.12■□□□□ 0.97
CCDC47-204ENST00000582252 TRUB1Q8WWH5 349 aaKnown RBP21.12■□□□□ 0.97
CCDC47-204ENST00000582252 ANKRD9Q96BM1 317 aaPredicted RBP21.12■□□□□ 0.97
CCDC47-204ENST00000582252 DCUN1D5Q9BTE7 237 aa21.12■□□□□ 0.97
CCDC47-204ENST00000582252 POLR2J2Q9GZM3 115 aaKnown RBP21.12■□□□□ 0.97
CCDC47-204ENST00000582252 ZNF350Q9GZX5 532 aa21.12■□□□□ 0.97
CCDC47-204ENST00000582252 PDE7BQ9NP56 450 aa21.12■□□□□ 0.97
CCDC47-204ENST00000582252 POLE3Q9NRF9 147 aa21.12■□□□□ 0.97
CCDC47-204ENST00000582252 FKBP14Q9NWM8 211 aa21.12■□□□□ 0.97
CCDC47-204ENST00000582252 NDOR1Q9UHB4 597 aa21.12■□□□□ 0.97
CCDC47-204ENST00000582252 MKLN1Q9UL63 735 aa21.12■□□□□ 0.97
CCDC47-204ENST00000582252 CSNK1G3Q9Y6M4 447 aa21.12■□□□□ 0.97
CCDC47-204ENST00000582252 HCRTR1O43613 425 aa21.12■□□□□ 0.97
CCDC47-204ENST00000582252 SDC3O75056 442 aa21.12■□□□□ 0.97
CCDC47-204ENST00000582252 NSA2O95478 260 aaKnown RBP21.12■□□□□ 0.97
CCDC47-204ENST00000582252 CDK1P06493 297 aa21.12■□□□□ 0.97
CCDC47-204ENST00000582252 ALDH4A1P30038 563 aa21.12■□□□□ 0.97
CCDC47-204ENST00000582252 MAP2K4P45985 399 aa21.12■□□□□ 0.97
CCDC47-204ENST00000582252 DEFB133Q30KQ1 61 aa21.12■□□□□ 0.97
CCDC47-204ENST00000582252 DCST2Q5T1A1 773 aa21.12■□□□□ 0.97
CCDC47-204ENST00000582252 C1orf94Q6P1W5 598 aa21.12■□□□□ 0.97
CCDC47-204ENST00000582252 ZNF595Q8IYB9 648 aa21.12■□□□□ 0.97
CCDC47-204ENST00000582252 STX19Q8N4C7 294 aa21.12■□□□□ 0.97
CCDC47-204ENST00000582252 ZNF285Q96NJ3 590 aa21.12■□□□□ 0.97
CCDC47-204ENST00000582252 EVA1AQ9H8M9 152 aa21.12■□□□□ 0.97
CCDC47-204ENST00000582252 C11orf16Q9NQ32 467 aa21.12■□□□□ 0.97
CCDC47-204ENST00000582252 MAN2C1Q9NTJ4 1040 aa21.12■□□□□ 0.97
CCDC47-204ENST00000582252 IRAK4Q9NWZ3 460 aa21.12■□□□□ 0.97
CCDC47-204ENST00000582252 SOHLH2Q9NX45 425 aa21.12■□□□□ 0.97
CCDC47-204ENST00000582252 A0A0A6YYC8 382 aaPredicted RBP21.11■□□□□ 0.97
CCDC47-204ENST00000582252 HYKKA2RU49 373 aa21.11■□□□□ 0.97
CCDC47-204ENST00000582252 EFCAB10A6NFE3 127 aa21.11■□□□□ 0.97
CCDC47-204ENST00000582252 I3L1I5 382 aaPredicted RBP21.11■□□□□ 0.97
CCDC47-204ENST00000582252 CLDN4O14493 209 aa21.11■□□□□ 0.97
CCDC47-204ENST00000582252 FCMRO60667 390 aa21.11■□□□□ 0.97
CCDC47-204ENST00000582252 CYP7B1O75881 506 aa21.11■□□□□ 0.97
CCDC47-204ENST00000582252 CFIP05156 583 aa21.11■□□□□ 0.97
CCDC47-204ENST00000582252 DBIP07108 87 aaKnown RBP21.11■□□□□ 0.97
CCDC47-204ENST00000582252 DMDP11532 3685 aa21.11■□□□□ 0.97
CCDC47-204ENST00000582252 PSMB9P28065 219 aa21.11■□□□□ 0.97
CCDC47-204ENST00000582252 AVPR1BP47901 424 aa21.11■□□□□ 0.97
CCDC47-204ENST00000582252 MASP1P48740 699 aa21.11■□□□□ 0.97
CCDC47-204ENST00000582252 SNRPGP62308 76 aaKnown RBP21.11■□□□□ 0.97
CCDC47-204ENST00000582252 NFATC3Q12968 1075 aa21.11■□□□□ 0.97
CCDC47-204ENST00000582252 TBCEQ15813 527 aaPredicted RBP21.11■□□□□ 0.97
CCDC47-204ENST00000582252 RALGAPA1Q6GYQ0 2036 aa21.11■□□□□ 0.97
CCDC47-204ENST00000582252 PLEKHM3Q6ZWE6 761 aa21.11■□□□□ 0.97
CCDC47-204ENST00000582252 RRM2BQ7LG56 351 aa21.11■□□□□ 0.97
CCDC47-204ENST00000582252 VWA5B2Q8N398 1253 aa21.11■□□□□ 0.97
CCDC47-204ENST00000582252 MORN4Q8NDC4 146 aa21.11■□□□□ 0.97
CCDC47-204ENST00000582252 GNPDA2Q8TDQ7 276 aa21.11■□□□□ 0.97
CCDC47-204ENST00000582252 CTHRC1Q96CG8 243 aa21.11■□□□□ 0.97
CCDC47-204ENST00000582252 ARMC7Q9H6L4 198 aa21.11■□□□□ 0.97
CCDC47-204ENST00000582252 CNOT2Q9NZN8 540 aaKnown RBP21.11■□□□□ 0.97
CCDC47-204ENST00000582252 PRR33A8MZF0 331 aa21.1■□□□□ 0.97
CCDC47-204ENST00000582252 OR5F1O95221 314 aa21.1■□□□□ 0.97
CCDC47-204ENST00000582252 SOX18P35713 384 aa21.1■□□□□ 0.97
CCDC47-204ENST00000582252 MAP4K2Q12851 820 aa21.1■□□□□ 0.97
CCDC47-204ENST00000582252 UBE2UQ5VVX9 321 aa21.1■□□□□ 0.97
CCDC47-204ENST00000582252 TMEM236Q5W0B7 351 aa21.1■□□□□ 0.97
CCDC47-204ENST00000582252 C12orf73Q69YU5 71 aa21.1■□□□□ 0.97
CCDC47-204ENST00000582252 CARFQ8N187 725 aa21.1■□□□□ 0.97
CCDC47-204ENST00000582252 C9orf43Q8TAL5 461 aaPredicted RBP21.1■□□□□ 0.97
CCDC47-204ENST00000582252 DIO2Q92813 273 aa21.1■□□□□ 0.97
CCDC47-204ENST00000582252 GGHQ92820 318 aa21.1■□□□□ 0.97
CCDC47-204ENST00000582252 TGM7Q96PF1 710 aa21.1■□□□□ 0.97
CCDC47-204ENST00000582252 SAP130Q9H0E3 1048 aa21.1■□□□□ 0.97
CCDC47-204ENST00000582252 UCKL1Q9NWZ5 548 aa21.1■□□□□ 0.97
CCDC47-204ENST00000582252 SCN2AQ99250 2005 aa21.1■□□□□ 0.97
CCDC47-204ENST00000582252 PCDH15Q96QU1 1955 aa21.1■□□□□ 0.97
CCDC47-204ENST00000582252 A0A1W2PPW3 197 aa21.09■□□□□ 0.97
CCDC47-204ENST00000582252 AGAP5A6NIR3 686 aa21.09■□□□□ 0.97
CCDC47-204ENST00000582252 TPST2O60704 377 aa21.09■□□□□ 0.97
CCDC47-204ENST00000582252 ZIC2O95409 532 aaPredicted RBP21.09■□□□□ 0.97
CCDC47-204ENST00000582252 ZBTB11O95625 1053 aaPredicted RBP21.09■□□□□ 0.97
CCDC47-204ENST00000582252 BCL10O95999 233 aa21.09■□□□□ 0.97
CCDC47-204ENST00000582252 POU6F2P78424 691 aaPredicted RBP21.09■□□□□ 0.97
CCDC47-204ENST00000582252 MGAT2Q10469 447 aa21.09■□□□□ 0.97
CCDC47-204ENST00000582252 STX4Q12846 297 aa21.09■□□□□ 0.97
CCDC47-204ENST00000582252 ZNF155Q12901 538 aaPredicted RBP21.09■□□□□ 0.97
CCDC47-204ENST00000582252 SLC13A2Q13183 592 aa21.09■□□□□ 0.97
CCDC47-204ENST00000582252 ZNHIT3Q15649 155 aaPredicted RBP21.09■□□□□ 0.97
CCDC47-204ENST00000582252 RANBP3LQ86VV4 465 aaPredicted RBP21.09■□□□□ 0.97
CCDC47-204ENST00000582252 GPR151Q8TDV0 419 aa21.09■□□□□ 0.97
CCDC47-204ENST00000582252 ZG16BQ96DA0 208 aa21.09■□□□□ 0.97
CCDC47-204ENST00000582252 AHCYL2Q96HN2 611 aaKnown RBP21.09■□□□□ 0.97
CCDC47-204ENST00000582252 LOXL4Q96JB6 756 aa21.09■□□□□ 0.97
CCDC47-204ENST00000582252 MCHR1Q99705 422 aa21.09■□□□□ 0.97
CCDC47-204ENST00000582252 RHNO1Q9BSD3 238 aa21.09■□□□□ 0.97
CCDC47-204ENST00000582252 KRCC1Q9NPI7 259 aaPredicted RBP21.09■□□□□ 0.97
CCDC47-204ENST00000582252 CUL9Q8IWT3 2517 aa21.09■□□□□ 0.97
CCDC47-204ENST00000582252 CPSF4LA6NMK7 179 aaKnown RBP21.09■□□□□ 0.97
CCDC47-204ENST00000582252 YKT6O15498 198 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms