RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	TIFAB	Q6ZNK6	161 aa		10.51	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	SAMD14	Q8IZD0	417 aa	Predicted RBP	10.51	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	GBP7	Q8N8V2	638 aa	Predicted RBP	10.51	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	OR2M3	Q8NG83	312 aa		10.51	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	FIG4	Q92562	907 aa		10.51	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	ERP27	Q96DN0	273 aa		10.51	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	UCN2	Q96RP3	112 aa		10.51	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	OPN3	Q9H1Y3	402 aa	Predicted RBP	10.51	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	ACBD3	Q9H3P7	528 aa		10.51	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	GSTO2	Q9H4Y5	243 aa		10.51	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	NEUROD4	Q9HD90	331 aa		10.51	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	NDRG3	Q9UGV2	375 aa		10.51	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	TBK1	Q9UHD2	729 aa		10.51	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	EIF3L	Q9Y262	564 aa	Known RBP	10.51	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	FLNA	P21333	2647 aa	Known RBP	10.51	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	NIPBL	Q6KC79	2804 aa	eCLIP	10.5	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	SHISA8	B8ZZ34	492 aa		10.5	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	SIAH2	O43255	324 aa		10.5	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	HCRTR2	O43614	444 aa		10.5	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	COQ9	O75208	318 aa		10.5	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	ENO1	P06733	434 aa	Known RBP	10.5	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	PYGB	P11216	843 aa		10.5	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	DDC	P20711	480 aa		10.5	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	SUCLG1	P53597	346 aa	Known RBP	10.5	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	PKNOX1	P55347	436 aa		10.5	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	CLDN15	P56746	228 aa		10.5	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	ZNF763	Q0D2J5	394 aa		10.5	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	PPP4R4	Q6NUP7	873 aa		10.5	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	ZNF550	Q7Z398	422 aa		10.5	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	BTLA	Q7Z6A9	289 aa		10.5	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	GALNT10	Q86SR1	603 aa		10.5	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	MARCH3	Q86UD3	253 aa		10.5	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	KRTAP1-3	Q8IUG1	177 aa		10.5	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	SLC22A9	Q8IVM8	553 aa		10.5	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	FADS6	Q8N9I5	356 aa		10.5	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	RNF138	Q8WVD3	245 aa		10.5	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	STARD4	Q96DR4	205 aa		10.5	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	L3HYPDH	Q96EM0	354 aa		10.5	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	DTNBP1	Q96EV8	351 aa		10.5	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	PGM2	Q96G03	612 aa		10.5	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	ZC3HAV1L	Q96H79	300 aa	Known RBP	10.5	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	ZNF845	Q96IR2	970 aa	Predicted RBP	10.5	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	WFIKKN1	Q96NZ8	548 aa		10.5	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	PINK1	Q9BXM7	581 aa		10.5	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	SHCBP1L	Q9BZQ2	653 aa		10.5	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	GLIPR2	Q9H4G4	154 aa		10.5	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	EQTN	Q9NQ60	294 aa		10.5	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	MIEF1	Q9NQG6	463 aa		10.5	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	DDX18	Q9NVP1	670 aa	Known RBP	10.5	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	ZNF337	Q9Y3M9	751 aa		10.5	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	TESMIN	Q9Y4I5	508 aa		10.5	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	MYO1G	B0I1T2	1018 aa		10.49	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	UPK1A	O00322	258 aa		10.49	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	MSTN	O14793	375 aa		10.49	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	RIPK2	O43353	540 aa		10.49	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	CRCP	O75575	148 aa		10.49	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	ABHD2	P08910	425 aa		10.49	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	FAM153B	P0C7A2	387 aa		10.49	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	PEPD	P12955	493 aa		10.49	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	FOSL1	P15407	271 aa		10.49	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	ADSL	P30566	484 aa	Predicted RBP	10.49	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	NTS	P30990	170 aa		10.49	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	HOXC12	P31275	282 aa		10.49	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	KIR2DL2	P43627	348 aa	Predicted RBP	10.49	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	KCNJ5	P48544	419 aa		10.49	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	CLDN20	P56880	219 aa		10.49	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	NKX6-1	P78426	367 aa	Predicted RBP	10.49	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	MRPS22	P82650	360 aa	Known RBP	10.49	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	FAM153C	Q494X1	144 aa		10.49	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	GLE1	Q53GS7	698 aa	Known RBP	10.49	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	FAM71E1	Q6IPT2	247 aa		10.49	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	GALNT18	Q6P9A2	607 aa		10.49	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	ZNF474	Q6S9Z5	364 aa	Predicted RBP	10.49	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	MEIOB	Q8N635	442 aa		10.49	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	MNS1	Q8NEH6	495 aa		10.49	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	FNDC9	Q8TBE3	224 aa		10.49	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	DUSP19	Q8WTR2	217 aa		10.49	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	GFM2	Q969S9	779 aa	Known RBP	10.49	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	C11orf24	Q96F05	449 aa	Predicted RBP	10.49	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	PIK3IP1	Q96FE7	263 aa		10.49	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	PIGQ	Q9BRB3	760 aa		10.49	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	MED18	Q9BUE0	208 aa		10.49	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	STMN4	Q9H169	189 aa	Predicted RBP	10.49	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	UBTD1	Q9HAC8	227 aa		10.49	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114		Q9N2J8	555 aa		10.49	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	TNFRSF12A	Q9NP84	129 aa		10.49	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	EMCN	Q9ULC0	261 aa		10.49	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	STK38L	Q9Y2H1	464 aa		10.49	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	MRPS18C	Q9Y3D5	142 aa	Known RBP	10.49	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	PTGDR2	Q9Y5Y4	395 aa		10.49	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	NAV3	Q8IVL0	2385 aa		10.49	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	PCNX3	Q9H6A9	2034 aa		10.49	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114		A0A1W2PPM1	405 aa		10.48	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	GXYLT2	A0PJZ3	443 aa		10.48	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	OR2M5	A3KFT3	312 aa		10.48	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	CCDC151	A5D8V7	595 aa		10.48	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	DEFB108A	A8MXU0	73 aa		10.48	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114		G3V2L1	256 aa		10.48	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	CTIF	O43310	598 aa	Known RBP	10.48	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	FADS1	O60427	444 aa		10.48	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms