RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 UGT2B28Q9BY64 529 aa17.76■□□□□ 0.43
SREBF1-220ENST00000581707 KCNJ16Q9NPI9 418 aa17.76■□□□□ 0.43
SREBF1-220ENST00000581707 NTMQ9P121 344 aa17.76■□□□□ 0.43
SREBF1-220ENST00000581707 CAMK2AQ9UQM7 478 aa17.76■□□□□ 0.43
SREBF1-220ENST00000581707 INTS1Q8N201 2190 aaKnown RBP17.75■□□□□ 0.43
SREBF1-220ENST00000581707 A0A0G2JNJ9 132 aa17.75■□□□□ 0.43
SREBF1-220ENST00000581707 NKX2-6A6NCS4 301 aa17.75■□□□□ 0.43
SREBF1-220ENST00000581707 ERLIN1O75477 346 aa17.75■□□□□ 0.43
SREBF1-220ENST00000581707 IL33O95760 270 aa17.75■□□□□ 0.43
SREBF1-220ENST00000581707 ACTL6AO96019 429 aa17.75■□□□□ 0.43
SREBF1-220ENST00000581707 EFNA1P20827 205 aaPredicted RBP17.75■□□□□ 0.43
SREBF1-220ENST00000581707 EVI2BP34910 448 aa17.75■□□□□ 0.43
SREBF1-220ENST00000581707 GCKP35557 465 aa17.75■□□□□ 0.43
SREBF1-220ENST00000581707 ADH7P40394 386 aa17.75■□□□□ 0.43
SREBF1-220ENST00000581707 ZFP36L2P47974 494 aaKnown RBP17.75■□□□□ 0.43
SREBF1-220ENST00000581707 SLC1A6P48664 564 aa17.75■□□□□ 0.43
SREBF1-220ENST00000581707 GAS1P54826 345 aa17.75■□□□□ 0.43
SREBF1-220ENST00000581707 PSMD4P55036 377 aaKnown RBP17.75■□□□□ 0.43
SREBF1-220ENST00000581707 PTGR1Q14914 329 aa17.75■□□□□ 0.43
SREBF1-220ENST00000581707 VPS26BQ4G0F5 336 aa17.75■□□□□ 0.43
SREBF1-220ENST00000581707 OR5M10Q6IEU7 315 aa17.75■□□□□ 0.43
SREBF1-220ENST00000581707 SZRD1Q7Z422 152 aa17.75■□□□□ 0.43
SREBF1-220ENST00000581707 ZNF781Q8N8C0 355 aa17.75■□□□□ 0.43
SREBF1-220ENST00000581707 OR14L1PQ8NHC6 308 aa17.75■□□□□ 0.43
SREBF1-220ENST00000581707 DTNBP1Q96EV8 351 aa17.75■□□□□ 0.43
SREBF1-220ENST00000581707 SPOCK3Q9BQ16 436 aa17.75■□□□□ 0.43
SREBF1-220ENST00000581707 OR2B2Q9GZK3 357 aa17.75■□□□□ 0.43
SREBF1-220ENST00000581707 C20orf27Q9GZN8 174 aa17.75■□□□□ 0.43
SREBF1-220ENST00000581707 PRDM14Q9GZV8 571 aa17.75■□□□□ 0.43
SREBF1-220ENST00000581707 Q9UFV3 132 aa17.75■□□□□ 0.43
SREBF1-220ENST00000581707 FBXL2Q9UKC9 423 aa17.75■□□□□ 0.43
SREBF1-220ENST00000581707 EIF3LQ9Y262 564 aaKnown RBP17.75■□□□□ 0.43
SREBF1-220ENST00000581707 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.75■□□□□ 0.43
SREBF1-220ENST00000581707 RAP2CQ9Y3L5 183 aa17.75■□□□□ 0.43
SREBF1-220ENST00000581707 DCHS2Q6V1P9 2916 aa17.75■□□□□ 0.43
SREBF1-220ENST00000581707 HCFC1P51610 2035 aa17.75■□□□□ 0.43
SREBF1-220ENST00000581707 GXYLT2A0PJZ3 443 aa17.74■□□□□ 0.43
SREBF1-220ENST00000581707 EMC8O43402 210 aa17.74■□□□□ 0.43
SREBF1-220ENST00000581707 TOXO94900 526 aa17.74■□□□□ 0.43
SREBF1-220ENST00000581707 SNUPNO95149 360 aaKnown RBP17.74■□□□□ 0.43
SREBF1-220ENST00000581707 EPPINO95925 133 aa17.74■□□□□ 0.43
SREBF1-220ENST00000581707 LAMP1P11279 417 aa17.74■□□□□ 0.43
SREBF1-220ENST00000581707 BGNP21810 368 aa17.74■□□□□ 0.43
SREBF1-220ENST00000581707 MAP3K8P41279 467 aa17.74■□□□□ 0.43
SREBF1-220ENST00000581707 RFX3P48380 749 aa17.74■□□□□ 0.43
SREBF1-220ENST00000581707 MAD2L1Q13257 205 aaPredicted RBP17.74■□□□□ 0.43
SREBF1-220ENST00000581707 MLC1Q15049 377 aa17.74■□□□□ 0.43
SREBF1-220ENST00000581707 SF3B4Q15427 424 aaKnown RBP eCLIP17.74■□□□□ 0.433e-15■■■■■ 30.6
SREBF1-220ENST00000581707 PDCD2Q16342 344 aaPredicted RBP17.74■□□□□ 0.43
SREBF1-220ENST00000581707 ACSF3Q4G176 576 aaPredicted RBP17.74■□□□□ 0.43
SREBF1-220ENST00000581707 DCST1Q5T197 706 aa17.74■□□□□ 0.43
SREBF1-220ENST00000581707 CPTPQ5TA50 214 aa17.74■□□□□ 0.43
SREBF1-220ENST00000581707 RIPPLY2Q5TAB7 128 aa17.74■□□□□ 0.43
SREBF1-220ENST00000581707 CDRT4Q8N9R6 151 aa17.74■□□□□ 0.43
SREBF1-220ENST00000581707 GPR151Q8TDV0 419 aa17.74■□□□□ 0.43
SREBF1-220ENST00000581707 HOXB13Q92826 284 aaPredicted RBP17.74■□□□□ 0.43
SREBF1-220ENST00000581707 WDYHV1Q96HA8 205 aa17.74■□□□□ 0.43
SREBF1-220ENST00000581707 PRPF18Q99633 342 aaKnown RBP17.74■□□□□ 0.43
SREBF1-220ENST00000581707 PAIP2Q9BPZ3 127 aaKnown RBP17.74■□□□□ 0.43
SREBF1-220ENST00000581707 ENKD1Q9H0I2 346 aa17.74■□□□□ 0.43
SREBF1-220ENST00000581707 TAS2R10Q9NYW0 307 aa17.74■□□□□ 0.43
SREBF1-220ENST00000581707 FLRT3Q9NZU0 649 aa17.74■□□□□ 0.43
SREBF1-220ENST00000581707 ABCG2Q9UNQ0 655 aa17.74■□□□□ 0.43
SREBF1-220ENST00000581707 CREBBPQ92793 2442 aa17.74■□□□□ 0.43
SREBF1-220ENST00000581707 NUP214P35658 2090 aaPredicted RBP17.73■□□□□ 0.43
SREBF1-220ENST00000581707 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.73■□□□□ 0.43
SREBF1-220ENST00000581707 A0A1W2PRB8 838 aa17.73■□□□□ 0.43
SREBF1-220ENST00000581707 SCO2O43819 266 aa17.73■□□□□ 0.43
SREBF1-220ENST00000581707 FADS1O60427 444 aa17.73■□□□□ 0.43
SREBF1-220ENST00000581707 NKX2-2O95096 273 aa17.73■□□□□ 0.43
SREBF1-220ENST00000581707 KCNH1O95259 989 aa17.73■□□□□ 0.43
SREBF1-220ENST00000581707 PRPS1L1P21108 318 aa17.73■□□□□ 0.43
SREBF1-220ENST00000581707 SRD5A2P31213 254 aa17.73■□□□□ 0.43
SREBF1-220ENST00000581707 RPL14P50914 215 aaKnown RBP17.73■□□□□ 0.43
SREBF1-220ENST00000581707 EMX2Q04743 252 aa17.73■□□□□ 0.43
SREBF1-220ENST00000581707 TFF3Q07654 80 aa17.73■□□□□ 0.43
SREBF1-220ENST00000581707 STX3Q13277 289 aa17.73■□□□□ 0.43
SREBF1-220ENST00000581707 HHATQ5VTY9 493 aa17.73■□□□□ 0.43
SREBF1-220ENST00000581707 SEM1Q6ZVN7 128 aa17.73■□□□□ 0.43
SREBF1-220ENST00000581707 GDF7Q7Z4P5 450 aa17.73■□□□□ 0.43
SREBF1-220ENST00000581707 KRTCAP2Q8N6L1 136 aa17.73■□□□□ 0.43
SREBF1-220ENST00000581707 ACBD4Q8NC06 268 aa17.73■□□□□ 0.43
SREBF1-220ENST00000581707 OR4K17Q8NGC6 315 aa17.73■□□□□ 0.43
SREBF1-220ENST00000581707 PIK3R3Q92569 461 aa17.73■□□□□ 0.43
SREBF1-220ENST00000581707 SLC9A6Q92581 669 aa17.73■□□□□ 0.43
SREBF1-220ENST00000581707 GIMAP5Q96F15 307 aa17.73■□□□□ 0.43
SREBF1-220ENST00000581707 RMND5BQ96G75 393 aaPredicted RBP17.73■□□□□ 0.43
SREBF1-220ENST00000581707 PPP1R36Q96LQ0 422 aa17.73■□□□□ 0.43
SREBF1-220ENST00000581707 MS4A4EQ96PG1 132 aa17.73■□□□□ 0.43
SREBF1-220ENST00000581707 SDHAF3Q9NRP4 125 aa17.73■□□□□ 0.43
SREBF1-220ENST00000581707 ATAD3AQ9NVI7 634 aa17.73■□□□□ 0.43
SREBF1-220ENST00000581707 FAM120CQ9NX05 1096 aaKnown RBP17.73■□□□□ 0.43
SREBF1-220ENST00000581707 PPP4R1LQ9P1A2 415 aa17.73■□□□□ 0.43
SREBF1-220ENST00000581707 MRPS18CQ9Y3D5 142 aaKnown RBP17.73■□□□□ 0.43
SREBF1-220ENST00000581707 C17orf51A8MQB3 221 aa17.72■□□□□ 0.43
SREBF1-220ENST00000581707 G6PDP11413 515 aa17.72■□□□□ 0.43
SREBF1-220ENST00000581707 DPP4P27487 766 aa17.72■□□□□ 0.43
SREBF1-220ENST00000581707 CLK3P49761 638 aaKnown RBP17.72■□□□□ 0.43
SREBF1-220ENST00000581707 PRR5P85299 388 aa17.72■□□□□ 0.43
SREBF1-220ENST00000581707 SMU1Q2TAY7 513 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms