RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 SPRR5A0A1B0GTR4 108 aa2.05□□□□□ -2.08
SMCHD1-206ENST00000581631 TMEM89A2RUT3 159 aa2.05□□□□□ -2.08
SMCHD1-206ENST00000581631 HTATSF1O43719 755 aaKnown RBP2.05□□□□□ -2.08
SMCHD1-206ENST00000581631 STK17BO94768 372 aa2.05□□□□□ -2.08
SMCHD1-206ENST00000581631 TOXO94900 526 aa2.05□□□□□ -2.08
SMCHD1-206ENST00000581631 HMOX1P09601 288 aa2.05□□□□□ -2.08
SMCHD1-206ENST00000581631 GNSP15586 552 aa2.05□□□□□ -2.08
SMCHD1-206ENST00000581631 CASP3P42574 277 aa2.05□□□□□ -2.08
SMCHD1-206ENST00000581631 RPS6P62753 249 aaKnown RBP2.05□□□□□ -2.08
SMCHD1-206ENST00000581631 NME3Q13232 169 aa2.05□□□□□ -2.08
SMCHD1-206ENST00000581631 ORC2Q13416 577 aaPredicted RBP2.05□□□□□ -2.08
SMCHD1-206ENST00000581631 TSTA3Q13630 321 aaPredicted RBP2.05□□□□□ -2.08
SMCHD1-206ENST00000581631 DPYSQ14117 519 aa2.05□□□□□ -2.08
SMCHD1-206ENST00000581631 MORF4L2Q15014 288 aa2.05□□□□□ -2.08
SMCHD1-206ENST00000581631 BEND6Q5SZJ8 279 aaPredicted RBP2.05□□□□□ -2.08
SMCHD1-206ENST00000581631 HACD2Q6Y1H2 254 aa2.05□□□□□ -2.08
SMCHD1-206ENST00000581631 HSD17B13Q7Z5P4 300 aaPredicted RBP2.05□□□□□ -2.08
SMCHD1-206ENST00000581631 C10orf53Q8N6V4 93 aa2.05□□□□□ -2.08
SMCHD1-206ENST00000581631 BBS1Q8NFJ9 593 aa2.05□□□□□ -2.08
SMCHD1-206ENST00000581631 PSMA8Q8TAA3 256 aa2.05□□□□□ -2.08
SMCHD1-206ENST00000581631 PHYHIPQ92561 330 aa2.05□□□□□ -2.08
SMCHD1-206ENST00000581631 IL4I1Q96RQ9 567 aa2.05□□□□□ -2.08
SMCHD1-206ENST00000581631 RTBDNQ9BSG5 229 aaPredicted RBP2.05□□□□□ -2.08
SMCHD1-206ENST00000581631 CNPY3Q9BT09 278 aa2.05□□□□□ -2.08
SMCHD1-206ENST00000581631 DUS2Q9NX74 493 aaKnown RBP2.05□□□□□ -2.08
SMCHD1-206ENST00000581631 TRMT6Q9UJA5 497 aaKnown RBP2.05□□□□□ -2.08
SMCHD1-206ENST00000581631 FZR1Q9UM11 496 aa2.05□□□□□ -2.08
SMCHD1-206ENST00000581631 ZMYM6O95789 1325 aa2.04□□□□□ -2.08
SMCHD1-206ENST00000581631 CTNNA1P35221 906 aaKnown RBP2.04□□□□□ -2.08
SMCHD1-206ENST00000581631 GPC3P51654 580 aa2.04□□□□□ -2.08
SMCHD1-206ENST00000581631 HNRNPFP52597 415 aaKnown RBP2.04□□□□□ -2.08
SMCHD1-206ENST00000581631 CARTPTQ16568 116 aa2.04□□□□□ -2.08
SMCHD1-206ENST00000581631 CYP51A1Q16850 503 aa2.04□□□□□ -2.08
SMCHD1-206ENST00000581631 OR2B11Q5JQS5 317 aa2.04□□□□□ -2.08
SMCHD1-206ENST00000581631 SLX4IPQ5VYV7 408 aa2.04□□□□□ -2.08
SMCHD1-206ENST00000581631 CXCL17Q6UXB2 119 aa2.04□□□□□ -2.08
SMCHD1-206ENST00000581631 DLEU7Q6UYE1 221 aa2.04□□□□□ -2.08
SMCHD1-206ENST00000581631 IL34Q6ZMJ4 242 aa2.04□□□□□ -2.08
SMCHD1-206ENST00000581631 FRA10AC1Q70Z53 315 aa2.04□□□□□ -2.08
SMCHD1-206ENST00000581631 CCDC91Q7Z6B0 441 aa2.04□□□□□ -2.08
SMCHD1-206ENST00000581631 IQCA1Q86XH1 822 aa2.04□□□□□ -2.08
SMCHD1-206ENST00000581631 LRRC17Q8N6Y2 441 aa2.04□□□□□ -2.08
SMCHD1-206ENST00000581631 NFAM1Q8NET5 270 aaPredicted RBP2.04□□□□□ -2.08
SMCHD1-206ENST00000581631 PSMG2Q969U7 264 aa2.04□□□□□ -2.08
SMCHD1-206ENST00000581631 TADA1Q96BN2 335 aa2.04□□□□□ -2.08
SMCHD1-206ENST00000581631 CCDC51Q96ER9 411 aa2.04□□□□□ -2.08
SMCHD1-206ENST00000581631 ZNF560Q96MR9 790 aa2.04□□□□□ -2.08
SMCHD1-206ENST00000581631 CBWD1Q9BRT8 395 aa2.04□□□□□ -2.08
SMCHD1-206ENST00000581631 PNO1Q9NRX1 252 aaKnown RBP2.04□□□□□ -2.08
SMCHD1-206ENST00000581631 EHFQ9NZC4 300 aa2.04□□□□□ -2.08
SMCHD1-206ENST00000581631 CDC42BPBQ9Y5S2 1711 aa2.03□□□□□ -2.08
SMCHD1-206ENST00000581631 RAD54L2Q9Y4B4 1467 aa2.03□□□□□ -2.08
SMCHD1-206ENST00000581631 GRIN2DO15399 1336 aa2.03□□□□□ -2.08
SMCHD1-206ENST00000581631 A0A0U1RRA0 63 aa2.03□□□□□ -2.08
SMCHD1-206ENST00000581631 DHRS7CA6NNS2 312 aa2.03□□□□□ -2.08
SMCHD1-206ENST00000581631 E9PLD3 99 aa2.03□□□□□ -2.08
SMCHD1-206ENST00000581631 IMPA2O14732 288 aa2.03□□□□□ -2.08
SMCHD1-206ENST00000581631 HSF2BPO75031 334 aa2.03□□□□□ -2.08
SMCHD1-206ENST00000581631 GPX5O75715 221 aa2.03□□□□□ -2.08
SMCHD1-206ENST00000581631 MMP23AO75900 390 aa2.03□□□□□ -2.08
SMCHD1-206ENST00000581631 GOSR1O95249 250 aa2.03□□□□□ -2.08
SMCHD1-206ENST00000581631 ANP32DO95626 131 aa2.03□□□□□ -2.08
SMCHD1-206ENST00000581631 PSG2P11465 335 aa2.03□□□□□ -2.08
SMCHD1-206ENST00000581631 MAGEA4P43358 317 aa2.03□□□□□ -2.08
SMCHD1-206ENST00000581631 SSTP61278 116 aa2.03□□□□□ -2.08
SMCHD1-206ENST00000581631 IL9RQ01113 521 aa2.03□□□□□ -2.08
SMCHD1-206ENST00000581631 ZNF45Q02386 682 aa2.03□□□□□ -2.08
SMCHD1-206ENST00000581631 SRYQ05066 204 aa2.03□□□□□ -2.08
SMCHD1-206ENST00000581631 GFPT1Q06210 699 aaPredicted RBP2.03□□□□□ -2.08
SMCHD1-206ENST00000581631 KCNJ11Q14654 390 aa2.03□□□□□ -2.08
SMCHD1-206ENST00000581631 HFEQ30201 348 aa2.03□□□□□ -2.08
SMCHD1-206ENST00000581631 ACSF3Q4G176 576 aaPredicted RBP2.03□□□□□ -2.08
SMCHD1-206ENST00000581631 AGKQ53H12 422 aa2.03□□□□□ -2.08
SMCHD1-206ENST00000581631 OR5M10Q6IEU7 315 aa2.03□□□□□ -2.08
SMCHD1-206ENST00000581631 GOLGA7Q7Z5G4 137 aa2.03□□□□□ -2.08
SMCHD1-206ENST00000581631 ZNF433Q8N7K0 673 aaPredicted RBP2.03□□□□□ -2.08
SMCHD1-206ENST00000581631 LINC01555Q8NAE3 123 aa2.03□□□□□ -2.08
SMCHD1-206ENST00000581631 LEMD2Q8NC56 503 aa2.03□□□□□ -2.08
SMCHD1-206ENST00000581631 WDR36Q8NI36 951 aaKnown RBP2.03□□□□□ -2.08
SMCHD1-206ENST00000581631 ARNTL2Q8WYA1 636 aa2.03□□□□□ -2.08
SMCHD1-206ENST00000581631 SPATA13Q96N96 652 aa2.03□□□□□ -2.08
SMCHD1-206ENST00000581631 NICN1Q9BSH3 213 aa2.03□□□□□ -2.08
SMCHD1-206ENST00000581631 NDUFAF3Q9BU61 184 aa2.03□□□□□ -2.08
SMCHD1-206ENST00000581631 SCRT1Q9BWW7 348 aa2.03□□□□□ -2.08
SMCHD1-206ENST00000581631 OR51J1Q9H342 316 aa2.03□□□□□ -2.08
SMCHD1-206ENST00000581631 ZNF331Q9NQX6 463 aaPredicted RBP2.03□□□□□ -2.08
SMCHD1-206ENST00000581631 COMMD8Q9NX08 183 aa2.03□□□□□ -2.08
SMCHD1-206ENST00000581631 KLK12Q9UKR0 248 aa2.03□□□□□ -2.08
SMCHD1-206ENST00000581631 DUSP12Q9UNI6 340 aa2.03□□□□□ -2.08
SMCHD1-206ENST00000581631 EXOSC1Q9Y3B2 195 aaKnown RBP2.03□□□□□ -2.08
SMCHD1-206ENST00000581631 L3MBTL1Q9Y468 752 aa2.03□□□□□ -2.08
SMCHD1-206ENST00000581631 METP08581 1390 aa2.02□□□□□ -2.09
SMCHD1-206ENST00000581631 ANKRD30BQ9BXX2 1392 aa2.02□□□□□ -2.09
SMCHD1-206ENST00000581631 RAI1Q7Z5J4 1906 aaPredicted RBP2.02□□□□□ -2.09
SMCHD1-206ENST00000581631 CA11O75493 328 aa2.02□□□□□ -2.09
SMCHD1-206ENST00000581631 LYPLA1O75608 230 aaPredicted RBP2.02□□□□□ -2.09
SMCHD1-206ENST00000581631 HPNP05981 417 aa2.02□□□□□ -2.09
SMCHD1-206ENST00000581631 ABHD2P08910 425 aa2.02□□□□□ -2.09
SMCHD1-206ENST00000581631 GABRR1P24046 479 aa2.02□□□□□ -2.09
SMCHD1-206ENST00000581631 CCNE1P24864 410 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms