RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 ALOX5P09917 674 aa9.95□□□□□ -0.82
NDEL1-208ENST00000580237 LAMP1P11279 417 aa9.95□□□□□ -0.82
NDEL1-208ENST00000580237 GABRA1P14867 456 aa9.95□□□□□ -0.82
NDEL1-208ENST00000580237 AGAP20933 346 aa9.95□□□□□ -0.82
NDEL1-208ENST00000580237 TCEA1P23193 301 aaKnown RBP9.95□□□□□ -0.82
NDEL1-208ENST00000580237 HTR1EP28566 365 aa9.95□□□□□ -0.82
NDEL1-208ENST00000580237 PTPN6P29350 595 aa9.95□□□□□ -0.82
NDEL1-208ENST00000580237 DCTP40126 519 aa9.95□□□□□ -0.82
NDEL1-208ENST00000580237 FRKP42685 505 aaPredicted RBP9.95□□□□□ -0.82
NDEL1-208ENST00000580237 WDR4P57081 412 aaKnown RBP9.95□□□□□ -0.82
NDEL1-208ENST00000580237 EMX2Q04743 252 aa9.95□□□□□ -0.82
NDEL1-208ENST00000580237 PGS1Q32NB8 556 aa9.95□□□□□ -0.82
NDEL1-208ENST00000580237 LSM12Q3MHD2 195 aaKnown RBP9.95□□□□□ -0.82
NDEL1-208ENST00000580237 WIPI1Q5MNZ9 446 aaPredicted RBP9.95□□□□□ -0.82
NDEL1-208ENST00000580237 C1orf185Q5T7R7 199 aa9.95□□□□□ -0.82
NDEL1-208ENST00000580237 FNDC7Q5VTL7 733 aa9.95□□□□□ -0.82
NDEL1-208ENST00000580237 ZNF787Q6DD87 383 aa9.95□□□□□ -0.82
NDEL1-208ENST00000580237 YRDCQ86U90 279 aaKnown RBP9.95□□□□□ -0.82
NDEL1-208ENST00000580237 IFNEQ86WN2 208 aa9.95□□□□□ -0.82
NDEL1-208ENST00000580237 NATD1Q8N6N6 113 aa9.95□□□□□ -0.82
NDEL1-208ENST00000580237 OR56A1Q8NGH5 318 aa9.95□□□□□ -0.82
NDEL1-208ENST00000580237 ASB5Q8WWX0 329 aa9.95□□□□□ -0.82
NDEL1-208ENST00000580237 TLCD1Q96CP7 247 aa9.95□□□□□ -0.82
NDEL1-208ENST00000580237 OTUB1Q96FW1 271 aaPredicted RBP9.95□□□□□ -0.82
NDEL1-208ENST00000580237 DUSP26Q9BV47 211 aa9.95□□□□□ -0.82
NDEL1-208ENST00000580237 TBL1XR1Q9BZK7 514 aa9.95□□□□□ -0.82
NDEL1-208ENST00000580237 DPY30Q9C005 99 aa9.95□□□□□ -0.82
NDEL1-208ENST00000580237 C20orf27Q9GZN8 174 aa9.95□□□□□ -0.82
NDEL1-208ENST00000580237 UBQLN3Q9H347 655 aa9.95□□□□□ -0.82
NDEL1-208ENST00000580237 AKTIPQ9H8T0 292 aa9.95□□□□□ -0.82
NDEL1-208ENST00000580237 CHST11Q9NPF2 352 aa9.95□□□□□ -0.82
NDEL1-208ENST00000580237 THAP1Q9NVV9 213 aa9.95□□□□□ -0.82
NDEL1-208ENST00000580237 ABCG2Q9UNQ0 655 aa9.95□□□□□ -0.82
NDEL1-208ENST00000580237 CAMK2AQ9UQM7 478 aa9.95□□□□□ -0.82
NDEL1-208ENST00000580237 SLC6A5Q9Y345 797 aa9.95□□□□□ -0.82
NDEL1-208ENST00000580237 HCFC1P51610 2035 aa9.94□□□□□ -0.82
NDEL1-208ENST00000580237 PCNX3Q9H6A9 2034 aa9.94□□□□□ -0.82
NDEL1-208ENST00000580237 TRPC5OSA6NMA1 111 aa9.94□□□□□ -0.82
NDEL1-208ENST00000580237 ADAM10O14672 748 aa9.94□□□□□ -0.82
NDEL1-208ENST00000580237 CBR3O75828 277 aa9.94□□□□□ -0.82
NDEL1-208ENST00000580237 KRT16P08779 473 aa9.94□□□□□ -0.82
NDEL1-208ENST00000580237 KITP10721 976 aa9.94□□□□□ -0.82
NDEL1-208ENST00000580237 HPGDP15428 266 aa9.94□□□□□ -0.82
NDEL1-208ENST00000580237 LBPP18428 481 aa9.94□□□□□ -0.82
NDEL1-208ENST00000580237 CHRNB4P30926 498 aa9.94□□□□□ -0.82
NDEL1-208ENST00000580237 PTGER4P35408 488 aa9.94□□□□□ -0.82
NDEL1-208ENST00000580237 PTGDSP41222 190 aa9.94□□□□□ -0.82
NDEL1-208ENST00000580237 NUP107P57740 925 aa9.94□□□□□ -0.82
NDEL1-208ENST00000580237 PMPCAQ10713 525 aa9.94□□□□□ -0.82
NDEL1-208ENST00000580237 GAB1Q13480 694 aa9.94□□□□□ -0.82
NDEL1-208ENST00000580237 LASP1Q14847 261 aaKnown RBP9.94□□□□□ -0.82
NDEL1-208ENST00000580237 MLC1Q15049 377 aa9.94□□□□□ -0.82
NDEL1-208ENST00000580237 SMU1Q2TAY7 513 aa9.94□□□□□ -0.82
NDEL1-208ENST00000580237 EIPR1Q53HC9 387 aa9.94□□□□□ -0.82
NDEL1-208ENST00000580237 EMC4Q5J8M3 183 aa9.94□□□□□ -0.82
NDEL1-208ENST00000580237 AGBL2Q5U5Z8 902 aa9.94□□□□□ -0.82
NDEL1-208ENST00000580237 OR5M10Q6IEU7 315 aa9.94□□□□□ -0.82
NDEL1-208ENST00000580237 MFSD12Q6NUT3 480 aa9.94□□□□□ -0.82
NDEL1-208ENST00000580237 PLCZ1Q86YW0 608 aa9.94□□□□□ -0.82
NDEL1-208ENST00000580237 PM20D2Q8IYS1 436 aa9.94□□□□□ -0.82
NDEL1-208ENST00000580237 RPRMLQ8N4K4 120 aa9.94□□□□□ -0.82
NDEL1-208ENST00000580237 MARVELD2Q8N4S9 558 aa9.94□□□□□ -0.82
NDEL1-208ENST00000580237 FAM83FQ8NEG4 500 aaPredicted RBP9.94□□□□□ -0.82
NDEL1-208ENST00000580237 RAB3IL1Q8TBN0 382 aa9.94□□□□□ -0.82
NDEL1-208ENST00000580237 OR5P2Q8WZ92 322 aa9.94□□□□□ -0.82
NDEL1-208ENST00000580237 PIK3R3Q92569 461 aa9.94□□□□□ -0.82
NDEL1-208ENST00000580237 FAM120BQ96EK7 910 aaKnown RBP9.94□□□□□ -0.82
NDEL1-208ENST00000580237 SFXN2Q96NB2 322 aa9.94□□□□□ -0.82
NDEL1-208ENST00000580237 YIPF4Q9BSR8 244 aa9.94□□□□□ -0.82
NDEL1-208ENST00000580237 BHLHE41Q9C0J9 482 aaPredicted RBP9.94□□□□□ -0.82
NDEL1-208ENST00000580237 RUBCNLQ9H714 662 aa9.94□□□□□ -0.82
NDEL1-208ENST00000580237 SDHAF3Q9NRP4 125 aa9.94□□□□□ -0.82
NDEL1-208ENST00000580237 PNPOQ9NVS9 261 aa9.94□□□□□ -0.82
NDEL1-208ENST00000580237 FAM120CQ9NX05 1096 aaKnown RBP9.94□□□□□ -0.82
NDEL1-208ENST00000580237 ASIC5Q9NY37 505 aa9.94□□□□□ -0.82
NDEL1-208ENST00000580237 HAO1Q9UJM8 370 aa9.94□□□□□ -0.82
NDEL1-208ENST00000580237 PCDHGB4Q9UN71 923 aa9.94□□□□□ -0.82
NDEL1-208ENST00000580237 FAF1Q9UNN5 650 aaPredicted RBP9.94□□□□□ -0.82
NDEL1-208ENST00000580237 UTP20O75691 2785 aaKnown RBP9.94□□□□□ -0.82
NDEL1-208ENST00000580237 GXYLT2A0PJZ3 443 aa9.93□□□□□ -0.82
NDEL1-208ENST00000580237 FAM47E-STBD1D6RA91 191 aa9.93□□□□□ -0.82
NDEL1-208ENST00000580237 H0Y3Z8 333 aa9.93□□□□□ -0.82
NDEL1-208ENST00000580237 HNRNPRO43390 633 aaKnown RBP9.93□□□□□ -0.82
NDEL1-208ENST00000580237 UTS2O95399 124 aa9.93□□□□□ -0.82
NDEL1-208ENST00000580237 IL33O95760 270 aa9.93□□□□□ -0.82
NDEL1-208ENST00000580237 SNRPB2P08579 225 aaKnown RBP9.93□□□□□ -0.82
NDEL1-208ENST00000580237 HOXD4P09016 255 aaPredicted RBP9.93□□□□□ -0.82
NDEL1-208ENST00000580237 ACP2P11117 423 aa9.93□□□□□ -0.82
NDEL1-208ENST00000580237 COX6B1P14854 86 aa9.93□□□□□ -0.82
NDEL1-208ENST00000580237 ATP6V1C1P21283 382 aa9.93□□□□□ -0.82
NDEL1-208ENST00000580237 SRD5A2P31213 254 aa9.93□□□□□ -0.82
NDEL1-208ENST00000580237 KIR3DL1P43629 444 aa9.93□□□□□ -0.82
NDEL1-208ENST00000580237 CCT3P49368 545 aaKnown RBP9.93□□□□□ -0.82
NDEL1-208ENST00000580237 CLNS1AP54105 237 aaKnown RBP9.93□□□□□ -0.82
NDEL1-208ENST00000580237 SLC18A1P54219 525 aa9.93□□□□□ -0.82
NDEL1-208ENST00000580237 DIO3P55073 304 aa9.93□□□□□ -0.82
NDEL1-208ENST00000580237 CLDN8P56748 225 aa9.93□□□□□ -0.82
NDEL1-208ENST00000580237 CRYZQ08257 329 aaKnown RBP9.93□□□□□ -0.82
NDEL1-208ENST00000580237 RCAN2Q14206 197 aa9.93□□□□□ -0.82
NDEL1-208ENST00000580237 SF3B4Q15427 424 aaKnown RBP eCLIP9.93□□□□□ -0.823e-11■■■■□ 20.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms