RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 BTBD16Q32M84 506 aa12.83□□□□□ -0.36
NDEL1-204ENST00000578172 ZNF671Q8TAW3 534 aa12.83□□□□□ -0.36
NDEL1-204ENST00000578172 PDXPQ96GD0 296 aa12.83□□□□□ -0.36
NDEL1-204ENST00000578172 FTSJ1Q9UET6 329 aa12.83□□□□□ -0.36
NDEL1-204ENST00000578172 TBX21Q9UL17 535 aa12.83□□□□□ -0.36
NDEL1-204ENST00000578172 PLXND1Q9Y4D7 1925 aa12.83□□□□□ -0.36
NDEL1-204ENST00000578172 CA3P07451 260 aa12.82□□□□□ -0.36
NDEL1-204ENST00000578172 MPIP34949 423 aa12.82□□□□□ -0.36
NDEL1-204ENST00000578172 KCNJ5P48544 419 aa12.82□□□□□ -0.36
NDEL1-204ENST00000578172 PGDP52209 483 aa12.82□□□□□ -0.36
NDEL1-204ENST00000578172 PDX1P52945 283 aa12.82□□□□□ -0.36
NDEL1-204ENST00000578172 LILRA6Q6PI73 481 aa12.82□□□□□ -0.36
NDEL1-204ENST00000578172 ESPNLQ6ZVH7 1005 aa12.82□□□□□ -0.36
NDEL1-204ENST00000578172 HDDC2Q7Z4H3 204 aa12.82□□□□□ -0.36
NDEL1-204ENST00000578172 SAMD12Q8N8I0 201 aa12.82□□□□□ -0.36
NDEL1-204ENST00000578172 OR6K6Q8NGW6 343 aa12.82□□□□□ -0.36
NDEL1-204ENST00000578172 CNRIP1Q96F85 164 aaPredicted RBP12.82□□□□□ -0.36
NDEL1-204ENST00000578172 ZNF514Q96K75 400 aaPredicted RBP12.82□□□□□ -0.36
NDEL1-204ENST00000578172 BTBD2Q9BX70 525 aa12.82□□□□□ -0.36
NDEL1-204ENST00000578172 SGPP1Q9BX95 441 aa12.82□□□□□ -0.36
NDEL1-204ENST00000578172 SAGE1Q9NXZ1 904 aa12.82□□□□□ -0.36
NDEL1-204ENST00000578172 KLHL42Q9P2K6 505 aa12.82□□□□□ -0.36
NDEL1-204ENST00000578172 EXTL2Q9UBQ6 330 aa12.82□□□□□ -0.36
NDEL1-204ENST00000578172 GRIP1Q9Y3R0 1128 aa12.82□□□□□ -0.36
NDEL1-204ENST00000578172 DAPL1A0PJW8 107 aa12.82□□□□□ -0.36
NDEL1-204ENST00000578172 SNTNA6NMZ2 147 aa12.82□□□□□ -0.36
NDEL1-204ENST00000578172 CLUP10909 449 aa12.82□□□□□ -0.36
NDEL1-204ENST00000578172 ALAS2P22557 587 aa12.82□□□□□ -0.36
NDEL1-204ENST00000578172 PRPH2P23942 346 aa12.82□□□□□ -0.36
NDEL1-204ENST00000578172 TRIM23P36406 574 aa12.82□□□□□ -0.36
NDEL1-204ENST00000578172 ZMYND11Q15326 602 aa12.82□□□□□ -0.36
NDEL1-204ENST00000578172 FAM109BQ6ICB4 259 aaPredicted RBP12.82□□□□□ -0.36
NDEL1-204ENST00000578172 CRIPAKQ8N1N5 446 aa12.82□□□□□ -0.36
NDEL1-204ENST00000578172 GRPEL2Q8TAA5 225 aa12.82□□□□□ -0.36
NDEL1-204ENST00000578172 MSANTD3Q96H12 275 aa12.82□□□□□ -0.36
NDEL1-204ENST00000578172 CCDC120Q96HB5 630 aa12.82□□□□□ -0.36
NDEL1-204ENST00000578172 OR52A5Q9H2C5 316 aa12.82□□□□□ -0.36
NDEL1-204ENST00000578172 SRMSQ9H3Y6 488 aa12.82□□□□□ -0.36
NDEL1-204ENST00000578172 C12orf4Q9NQ89 552 aa12.82□□□□□ -0.36
NDEL1-204ENST00000578172 SSNA1O43805 119 aa12.82□□□□□ -0.36
NDEL1-204ENST00000578172 DNAJB6O75190 326 aa12.82□□□□□ -0.36
NDEL1-204ENST00000578172 ZNF888P0CJ79 500 aaPredicted RBP12.82□□□□□ -0.36
NDEL1-204ENST00000578172 ERV3-1Q14264 604 aa12.82□□□□□ -0.36
NDEL1-204ENST00000578172 TBC1D19Q8N5T2 526 aa12.82□□□□□ -0.36
NDEL1-204ENST00000578172 DNAJC5GQ8N7S2 189 aa12.82□□□□□ -0.36
NDEL1-204ENST00000578172 FAM98AQ8NCA5 519 aaKnown RBP12.82□□□□□ -0.36
NDEL1-204ENST00000578172 ASB15Q8WXK1 588 aa12.82□□□□□ -0.36
NDEL1-204ENST00000578172 NEURL3Q96EH8 262 aa12.82□□□□□ -0.36
NDEL1-204ENST00000578172 RPP25Q9BUL9 199 aaKnown RBP12.82□□□□□ -0.36
NDEL1-204ENST00000578172 CHIAQ9BZP6 476 aa12.82□□□□□ -0.36
NDEL1-204ENST00000578172 TMEM38AQ9H6F2 299 aa12.82□□□□□ -0.36
NDEL1-204ENST00000578172 PRSS16Q9NQE7 514 aa12.82□□□□□ -0.36
NDEL1-204ENST00000578172 FOXE1O00358 373 aaPredicted RBP12.82□□□□□ -0.36
NDEL1-204ENST00000578172 NUPL2O15504 423 aaKnown RBP12.82□□□□□ -0.36
NDEL1-204ENST00000578172 RPP14O95059 124 aaKnown RBP12.82□□□□□ -0.36
NDEL1-204ENST00000578172 PTTG1O95997 202 aa12.82□□□□□ -0.36
NDEL1-204ENST00000578172 UQCRC1P31930 480 aa12.82□□□□□ -0.36
NDEL1-204ENST00000578172 PDGFRLQ15198 375 aa12.82□□□□□ -0.36
NDEL1-204ENST00000578172 MZT2BQ6NZ67 158 aa12.82□□□□□ -0.36
NDEL1-204ENST00000578172 CCDC28AQ8IWP9 274 aa12.82□□□□□ -0.36
NDEL1-204ENST00000578172 LRRC17Q8N6Y2 441 aa12.82□□□□□ -0.36
NDEL1-204ENST00000578172 COX18Q8N8Q8 333 aa12.82□□□□□ -0.36
NDEL1-204ENST00000578172 OR6C4Q8NGE1 309 aa12.82□□□□□ -0.36
NDEL1-204ENST00000578172 OR5T3Q8NGG3 340 aa12.82□□□□□ -0.36
NDEL1-204ENST00000578172 OR13C5Q8NGS8 318 aa12.82□□□□□ -0.36
NDEL1-204ENST00000578172 TM9SF4Q92544 642 aa12.82□□□□□ -0.36
NDEL1-204ENST00000578172 FRMD6Q96NE9 622 aa12.82□□□□□ -0.36
NDEL1-204ENST00000578172 OR7D2Q96RA2 312 aa12.82□□□□□ -0.36
NDEL1-204ENST00000578172 DCLRE1CQ96SD1 692 aaKnown RBP12.82□□□□□ -0.36
NDEL1-204ENST00000578172 SPATA5L1Q9BVQ7 753 aa12.82□□□□□ -0.36
NDEL1-204ENST00000578172 SCN4AP35499 1836 aa12.81□□□□□ -0.36
NDEL1-204ENST00000578172 EEF1E1O43324 174 aaKnown RBP12.81□□□□□ -0.36
NDEL1-204ENST00000578172 OR10H2O60403 315 aa12.81□□□□□ -0.36
NDEL1-204ENST00000578172 DRD5P21918 477 aa12.81□□□□□ -0.36
NDEL1-204ENST00000578172 PRKACBP22694 351 aa12.81□□□□□ -0.36
NDEL1-204ENST00000578172 ITGB7P26010 798 aa12.81□□□□□ -0.36
NDEL1-204ENST00000578172 BMPR1AP36894 532 aa12.81□□□□□ -0.36
NDEL1-204ENST00000578172 CST6Q15828 149 aa12.81□□□□□ -0.36
NDEL1-204ENST00000578172 ENTPD8Q5MY95 495 aa12.81□□□□□ -0.36
NDEL1-204ENST00000578172 LCN1P1Q5VSP4 162 aa12.81□□□□□ -0.36
NDEL1-204ENST00000578172 HOMEZQ8IX15 550 aa12.81□□□□□ -0.36
NDEL1-204ENST00000578172 OR8K3Q8NH51 312 aa12.81□□□□□ -0.36
NDEL1-204ENST00000578172 COQ10AQ96MF6 247 aa12.81□□□□□ -0.36
NDEL1-204ENST00000578172 SLC22A4Q9H015 551 aa12.81□□□□□ -0.36
NDEL1-204ENST00000578172 CHST8Q9H2A9 424 aa12.81□□□□□ -0.36
NDEL1-204ENST00000578172 CDCP1Q9H5V8 836 aa12.81□□□□□ -0.36
NDEL1-204ENST00000578172 ANKRD61A6NGH8 418 aa12.81□□□□□ -0.36
NDEL1-204ENST00000578172 A8MUA0 341 aa12.81□□□□□ -0.36
NDEL1-204ENST00000578172 LRRN3E7EW58 273 aa12.81□□□□□ -0.36
NDEL1-204ENST00000578172 CRYZL1O95825 349 aa12.81□□□□□ -0.36
NDEL1-204ENST00000578172 LALBAP00709 142 aa12.81□□□□□ -0.36
NDEL1-204ENST00000578172 SCG5P05408 212 aa12.81□□□□□ -0.36
NDEL1-204ENST00000578172 HOXB6P17509 224 aaKnown RBP12.81□□□□□ -0.36
NDEL1-204ENST00000578172 PYCR1P32322 319 aa12.81□□□□□ -0.36
NDEL1-204ENST00000578172 TRHRP34981 398 aaPredicted RBP12.81□□□□□ -0.36
NDEL1-204ENST00000578172 WNT4P56705 351 aa12.81□□□□□ -0.36
NDEL1-204ENST00000578172 FABP5Q01469 135 aa12.81□□□□□ -0.36
NDEL1-204ENST00000578172 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.81□□□□□ -0.36
NDEL1-204ENST00000578172 TUBA3EQ6PEY2 450 aa12.81□□□□□ -0.36
NDEL1-204ENST00000578172 SERPINA12Q8IW75 414 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms