RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 UQCRC1P31930 480 aa13.15□□□□□ -0.3
SMARCE1-213ENST00000578044 EVI2BP34910 448 aa13.15□□□□□ -0.3
SMARCE1-213ENST00000578044 MAP3K8P41279 467 aa13.15□□□□□ -0.3
SMARCE1-213ENST00000578044 FRKP42685 505 aaPredicted RBP13.15□□□□□ -0.3
SMARCE1-213ENST00000578044 FOXA1P55317 472 aa13.15□□□□□ -0.3
SMARCE1-213ENST00000578044 CLDN18P56856 261 aa13.15□□□□□ -0.3
SMARCE1-213ENST00000578044 FGFBP1Q14512 234 aa13.15□□□□□ -0.3
SMARCE1-213ENST00000578044 ZNHIT3Q15649 155 aaPredicted RBP13.15□□□□□ -0.3
SMARCE1-213ENST00000578044 DECR1Q16698 335 aa13.15□□□□□ -0.3
SMARCE1-213ENST00000578044 CFAP157Q5JU67 520 aa13.15□□□□□ -0.3
SMARCE1-213ENST00000578044 SPDYAQ5MJ70 313 aa13.15□□□□□ -0.3
SMARCE1-213ENST00000578044 SLC44A2Q8IWA5 706 aaPredicted RBP13.15□□□□□ -0.3
SMARCE1-213ENST00000578044 RIBC1Q8N443 379 aaPredicted RBP13.15□□□□□ -0.3
SMARCE1-213ENST00000578044 CCNYL1Q8N7R7 359 aa13.15□□□□□ -0.3
SMARCE1-213ENST00000578044 CHDHQ8NE62 594 aaPredicted RBP13.15□□□□□ -0.3
SMARCE1-213ENST00000578044 KAT2AQ92830 837 aa13.15□□□□□ -0.3
SMARCE1-213ENST00000578044 MTERF3Q96E29 417 aa13.15□□□□□ -0.3
SMARCE1-213ENST00000578044 DACH2Q96NX9 599 aa13.15□□□□□ -0.3
SMARCE1-213ENST00000578044 KCNA7Q96RP8 456 aa13.15□□□□□ -0.3
SMARCE1-213ENST00000578044 TUBA1CQ9BQE3 449 aa13.15□□□□□ -0.3
SMARCE1-213ENST00000578044 G6PC3Q9BUM1 346 aa13.15□□□□□ -0.3
SMARCE1-213ENST00000578044 POLDIP3Q9BY77 421 aaKnown RBP13.15□□□□□ -0.3
SMARCE1-213ENST00000578044 CLEC4MQ9H2X3 399 aaPredicted RBP13.15□□□□□ -0.3
SMARCE1-213ENST00000578044 L2HGDHQ9H9P8 463 aa13.15□□□□□ -0.3
SMARCE1-213ENST00000578044 Q9N2J8 555 aa13.15□□□□□ -0.3
SMARCE1-213ENST00000578044 TBK1Q9UHD2 729 aa13.15□□□□□ -0.3
SMARCE1-213ENST00000578044 ST6GALNAC2Q9UJ37 374 aa13.15□□□□□ -0.3
SMARCE1-213ENST00000578044 MAPRE3Q9UPY8 281 aa13.15□□□□□ -0.3
SMARCE1-213ENST00000578044 OR10H1Q9Y4A9 318 aa13.15□□□□□ -0.3
SMARCE1-213ENST00000578044 NUP214P35658 2090 aaPredicted RBP13.15□□□□□ -0.3
SMARCE1-213ENST00000578044 ARID1AO14497 2285 aa13.14□□□□□ -0.31
SMARCE1-213ENST00000578044 NAV3Q8IVL0 2385 aa13.14□□□□□ -0.31
SMARCE1-213ENST00000578044 A0A1W2PPM1 405 aa13.14□□□□□ -0.31
SMARCE1-213ENST00000578044 HSPA4LO95757 839 aa13.14□□□□□ -0.31
SMARCE1-213ENST00000578044 IL33O95760 270 aa13.14□□□□□ -0.31
SMARCE1-213ENST00000578044 DPP4P27487 766 aa13.14□□□□□ -0.31
SMARCE1-213ENST00000578044 CLK3P49761 638 aaKnown RBP13.14□□□□□ -0.31
SMARCE1-213ENST00000578044 NCBP2P52298 156 aaKnown RBP eCLIP13.14□□□□□ -0.31
SMARCE1-213ENST00000578044 B3GALT5-AS1P59052 145 aa13.14□□□□□ -0.31
SMARCE1-213ENST00000578044 MLC1Q15049 377 aa13.14□□□□□ -0.31
SMARCE1-213ENST00000578044 VPS26BQ4G0F5 336 aa13.14□□□□□ -0.31
SMARCE1-213ENST00000578044 DESI1Q6ICB0 168 aa13.14□□□□□ -0.31
SMARCE1-213ENST00000578044 FAM180BQ6P0A1 224 aa13.14□□□□□ -0.31
SMARCE1-213ENST00000578044 ZCCHC12Q6PEW1 402 aa13.14□□□□□ -0.31
SMARCE1-213ENST00000578044 ZZZ3Q8IYH5 903 aa13.14□□□□□ -0.31
SMARCE1-213ENST00000578044 C9orf106Q8NAJ2 232 aa13.14□□□□□ -0.31
SMARCE1-213ENST00000578044 CEP70Q8NHQ1 597 aa13.14□□□□□ -0.31
SMARCE1-213ENST00000578044 SMPDL3BQ92485 455 aa13.14□□□□□ -0.31
SMARCE1-213ENST00000578044 RMND5BQ96G75 393 aaPredicted RBP13.14□□□□□ -0.31
SMARCE1-213ENST00000578044 ALPK1Q96QP1 1244 aa13.14□□□□□ -0.31
SMARCE1-213ENST00000578044 RHOXF2Q9BQY4 288 aa13.14□□□□□ -0.31
SMARCE1-213ENST00000578044 GLIPR2Q9H4G4 154 aa13.14□□□□□ -0.31
SMARCE1-213ENST00000578044 PTGES2Q9H7Z7 377 aa13.14□□□□□ -0.31
SMARCE1-213ENST00000578044 ACSS1Q9NUB1 689 aaPredicted RBP13.14□□□□□ -0.31
SMARCE1-213ENST00000578044 DDX18Q9NVP1 670 aaKnown RBP13.14□□□□□ -0.31
SMARCE1-213ENST00000578044 C1orf109Q9NX04 203 aa13.14□□□□□ -0.31
SMARCE1-213ENST00000578044 ITGB1BP2Q9UKP3 347 aa13.14□□□□□ -0.31
SMARCE1-213ENST00000578044 CBLCQ9ULV8 474 aa13.14□□□□□ -0.31
SMARCE1-213ENST00000578044 CLCA1A8K7I4 914 aa13.13□□□□□ -0.31
SMARCE1-213ENST00000578044 A8MXE2 369 aa13.13□□□□□ -0.31
SMARCE1-213ENST00000578044 KDM4EB2RXH2 506 aaPredicted RBP13.13□□□□□ -0.31
SMARCE1-213ENST00000578044 H0Y3Z8 333 aa13.13□□□□□ -0.31
SMARCE1-213ENST00000578044 COPEO14579 308 aa13.13□□□□□ -0.31
SMARCE1-213ENST00000578044 MSTNO14793 375 aa13.13□□□□□ -0.31
SMARCE1-213ENST00000578044 RGS14O43566 566 aa13.13□□□□□ -0.31
SMARCE1-213ENST00000578044 TNFRSF21O75509 655 aa13.13□□□□□ -0.31
SMARCE1-213ENST00000578044 CRCPO75575 148 aa13.13□□□□□ -0.31
SMARCE1-213ENST00000578044 SERPINB5P36952 375 aa13.13□□□□□ -0.31
SMARCE1-213ENST00000578044 SLCO1A2P46721 670 aa13.13□□□□□ -0.31
SMARCE1-213ENST00000578044 DGKQP52824 942 aa13.13□□□□□ -0.31
SMARCE1-213ENST00000578044 ART1P52961 327 aa13.13□□□□□ -0.31
SMARCE1-213ENST00000578044 IST1P53990 364 aa13.13□□□□□ -0.31
SMARCE1-213ENST00000578044 DIO3P55073 304 aa13.13□□□□□ -0.31
SMARCE1-213ENST00000578044 PRR5P85299 388 aa13.13□□□□□ -0.31
SMARCE1-213ENST00000578044 C17orf67Q0P5P2 114 aa13.13□□□□□ -0.31
SMARCE1-213ENST00000578044 PDE7AQ13946 482 aa13.13□□□□□ -0.31
SMARCE1-213ENST00000578044 KRTAP21-3Q3LHN1 58 aa13.13□□□□□ -0.31
SMARCE1-213ENST00000578044 NATD1Q8N6N6 113 aa13.13□□□□□ -0.31
SMARCE1-213ENST00000578044 ZFP28Q8NHY6 868 aa13.13□□□□□ -0.31
SMARCE1-213ENST00000578044 ZBED6CLQ96FA7 236 aaPredicted RBP13.13□□□□□ -0.31
SMARCE1-213ENST00000578044 SFXN2Q96NB2 322 aa13.13□□□□□ -0.31
SMARCE1-213ENST00000578044 EBPLQ9BY08 206 aa13.13□□□□□ -0.31
SMARCE1-213ENST00000578044 GIN1Q9NXP7 522 aa13.13□□□□□ -0.31
SMARCE1-213ENST00000578044 STOML1Q9UBI4 398 aa13.13□□□□□ -0.31
SMARCE1-213ENST00000578044 FBXL2Q9UKC9 423 aa13.13□□□□□ -0.31
SMARCE1-213ENST00000578044 ZNF175Q9Y473 711 aa13.13□□□□□ -0.31
SMARCE1-213ENST00000578044 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.12□□□□□ -0.31
SMARCE1-213ENST00000578044 C7orf72A4D263 438 aa13.12□□□□□ -0.31
SMARCE1-213ENST00000578044 AZIN1O14977 448 aa13.12□□□□□ -0.31
SMARCE1-213ENST00000578044 TRIM13O60858 407 aa13.12□□□□□ -0.31
SMARCE1-213ENST00000578044 TNFSF13O75888 250 aa13.12□□□□□ -0.31
SMARCE1-213ENST00000578044 CHEK2O96017 543 aa13.12□□□□□ -0.31
SMARCE1-213ENST00000578044 JUNP05412 331 aaKnown RBP13.12□□□□□ -0.31
SMARCE1-213ENST00000578044 NUDT17P0C025 328 aa13.12□□□□□ -0.31
SMARCE1-213ENST00000578044 KRT4P19013 534 aa13.12□□□□□ -0.31
SMARCE1-213ENST00000578044 MC3RP41968 323 aa13.12□□□□□ -0.31
SMARCE1-213ENST00000578044 ASMTP46597 345 aa13.12□□□□□ -0.31
SMARCE1-213ENST00000578044 BTKQ06187 659 aa13.12□□□□□ -0.31
SMARCE1-213ENST00000578044 TMEM44Q2T9K0 475 aa13.12□□□□□ -0.31
SMARCE1-213ENST00000578044 LRIG3Q6UXM1 1119 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms