RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 TINAGQ9UJW2 476 aa17.66■□□□□ 0.42
SS18-208ENST00000577751 C15orf41Q9Y2V0 281 aa17.66■□□□□ 0.42
SS18-208ENST00000577751 DOPEY2Q9Y3R5 2298 aa17.65■□□□□ 0.42
SS18-208ENST00000577751 UQCRHLA0A096LP55 91 aa17.65■□□□□ 0.42
SS18-208ENST00000577751 C2orf72A6NCS6 295 aa17.65■□□□□ 0.42
SS18-208ENST00000577751 OR14I1A6ND48 311 aa17.65■□□□□ 0.42
SS18-208ENST00000577751 SNPHO15079 494 aa17.65■□□□□ 0.42
SS18-208ENST00000577751 CFLARO15519 480 aa17.65■□□□□ 0.42
SS18-208ENST00000577751 FADS1O60427 444 aa17.65■□□□□ 0.42
SS18-208ENST00000577751 HCN1O60741 890 aa17.65■□□□□ 0.42
SS18-208ENST00000577751 DIAPH2O60879 1101 aa17.65■□□□□ 0.42
SS18-208ENST00000577751 KCNH1O95259 989 aa17.65■□□□□ 0.42
SS18-208ENST00000577751 IGKV1D-16P01601 117 aa17.65■□□□□ 0.42
SS18-208ENST00000577751 IDO1P14902 403 aa17.65■□□□□ 0.42
SS18-208ENST00000577751 PTPN6P29350 595 aa17.65■□□□□ 0.42
SS18-208ENST00000577751 IL12AP29459 219 aa17.65■□□□□ 0.42
SS18-208ENST00000577751 PSMD4P55036 377 aaKnown RBP17.65■□□□□ 0.42
SS18-208ENST00000577751 CASP6P55212 293 aa17.65■□□□□ 0.42
SS18-208ENST00000577751 NME5P56597 212 aa17.65■□□□□ 0.42
SS18-208ENST00000577751 LASP1Q14847 261 aaKnown RBP17.65■□□□□ 0.42
SS18-208ENST00000577751 GSTA3Q16772 222 aa17.65■□□□□ 0.42
SS18-208ENST00000577751 PDCD4Q53EL6 469 aaKnown RBP17.65■□□□□ 0.42
SS18-208ENST00000577751 CDC73Q6P1J9 531 aa17.65■□□□□ 0.42
SS18-208ENST00000577751 ANGPTL8Q6UXH0 198 aa17.65■□□□□ 0.42
SS18-208ENST00000577751 WDSUB1Q8N9V3 476 aa17.65■□□□□ 0.42
SS18-208ENST00000577751 OR1J4Q8NGS1 313 aa17.65■□□□□ 0.42
SS18-208ENST00000577751 STACQ99469 402 aa17.65■□□□□ 0.42
SS18-208ENST00000577751 PIGUQ9H490 435 aa17.65■□□□□ 0.42
SS18-208ENST00000577751 DUSP22Q9NRW4 184 aa17.65■□□□□ 0.42
SS18-208ENST00000577751 HRH3Q9Y5N1 445 aa17.65■□□□□ 0.42
SS18-208ENST00000577751 LRRK2Q5S007 2527 aa17.65■□□□□ 0.42
SS18-208ENST00000577751 MYO7BQ6PIF6 2116 aa17.65■□□□□ 0.42
SS18-208ENST00000577751 TRGV5A0A0B4J1U4 118 aa17.64■□□□□ 0.41
SS18-208ENST00000577751 CCL21O00585 134 aa17.64■□□□□ 0.41
SS18-208ENST00000577751 AQP7O14520 342 aa17.64■□□□□ 0.41
SS18-208ENST00000577751 PRRG2O14669 202 aa17.64■□□□□ 0.41
SS18-208ENST00000577751 GNB5O14775 395 aa17.64■□□□□ 0.41
SS18-208ENST00000577751 HPNP05981 417 aa17.64■□□□□ 0.41
SS18-208ENST00000577751 ALOX5P09917 674 aa17.64■□□□□ 0.41
SS18-208ENST00000577751 ENDOUP21128 410 aaKnown RBP17.64■□□□□ 0.41
SS18-208ENST00000577751 GDF1P27539 372 aa17.64■□□□□ 0.41
SS18-208ENST00000577751 S100A3P33764 101 aa17.64■□□□□ 0.41
SS18-208ENST00000577751 EVI2BP34910 448 aa17.64■□□□□ 0.41
SS18-208ENST00000577751 PER3P56645 1201 aa17.64■□□□□ 0.41
SS18-208ENST00000577751 FAM174BQ3ZCQ3 159 aa17.64■□□□□ 0.41
SS18-208ENST00000577751 GLB1L3Q8NCI6 653 aaPredicted RBP17.64■□□□□ 0.41
SS18-208ENST00000577751 VPS37AQ8NEZ2 397 aa17.64■□□□□ 0.41
SS18-208ENST00000577751 RMND5BQ96G75 393 aaPredicted RBP17.64■□□□□ 0.41
SS18-208ENST00000577751 PHF12Q96QT6 1004 aa17.64■□□□□ 0.41
SS18-208ENST00000577751 YIPF4Q9BSR8 244 aa17.64■□□□□ 0.41
SS18-208ENST00000577751 ACTRT3Q9BYD9 372 aa17.64■□□□□ 0.41
SS18-208ENST00000577751 SDR39U1Q9NRG7 319 aaPredicted RBP17.64■□□□□ 0.41
SS18-208ENST00000577751 FAM120CQ9NX05 1096 aaKnown RBP17.64■□□□□ 0.41
SS18-208ENST00000577751 FLRT3Q9NZU0 649 aa17.64■□□□□ 0.41
SS18-208ENST00000577751 WIF1Q9Y5W5 379 aa17.64■□□□□ 0.41
SS18-208ENST00000577751 COL12A1Q99715 3063 aa17.63■□□□□ 0.41
SS18-208ENST00000577751 UBDO15205 165 aa17.63■□□□□ 0.41
SS18-208ENST00000577751 SOX30O94993 753 aa17.63■□□□□ 0.41
SS18-208ENST00000577751 KCNK2O95069 426 aa17.63■□□□□ 0.41
SS18-208ENST00000577751 MAN2A2P49641 1150 aa17.63■□□□□ 0.41
SS18-208ENST00000577751 IDH3AP50213 366 aa17.63■□□□□ 0.41
SS18-208ENST00000577751 TP53BP2Q13625 1128 aa17.63■□□□□ 0.41
SS18-208ENST00000577751 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.63■□□□□ 0.41
SS18-208ENST00000577751 SPDYE7PQ495Y7 208 aa17.63■□□□□ 0.41
SS18-208ENST00000577751 EMC4Q5J8M3 183 aa17.63■□□□□ 0.41
SS18-208ENST00000577751 BHLHB9Q6PI77 547 aa17.63■□□□□ 0.41
SS18-208ENST00000577751 ANKRD46Q86W74 232 aa17.63■□□□□ 0.41
SS18-208ENST00000577751 FBXO30Q8TB52 745 aa17.63■□□□□ 0.41
SS18-208ENST00000577751 LDAHQ9H6V9 325 aa17.63■□□□□ 0.41
SS18-208ENST00000577751 BTNL2Q9UIR0 455 aa17.63■□□□□ 0.41
SS18-208ENST00000577751 SH3BGRL2Q9UJC5 107 aa17.63■□□□□ 0.41
SS18-208ENST00000577751 PCDHGB4Q9UN71 923 aa17.63■□□□□ 0.41
SS18-208ENST00000577751 ABCG2Q9UNQ0 655 aa17.63■□□□□ 0.41
SS18-208ENST00000577751 MEMO1Q9Y316 297 aa17.63■□□□□ 0.41
SS18-208ENST00000577751 DIDO1Q9BTC0 2240 aaKnown RBP17.63■□□□□ 0.41
SS18-208ENST00000577751 B4DXG7 233 aa17.62■□□□□ 0.41
SS18-208ENST00000577751 NPIPA2E9PIF3 369 aa17.62■□□□□ 0.41
SS18-208ENST00000577751 NPIPA3F8WFD2 350 aa17.62■□□□□ 0.41
SS18-208ENST00000577751 CBR3O75828 277 aa17.62■□□□□ 0.41
SS18-208ENST00000577751 PGRP06401 933 aa17.62■□□□□ 0.41
SS18-208ENST00000577751 TPOP07202 933 aa17.62■□□□□ 0.41
SS18-208ENST00000577751 KRT16P08779 473 aa17.62■□□□□ 0.41
SS18-208ENST00000577751 ZFP36L2P47974 494 aaKnown RBP17.62■□□□□ 0.41
SS18-208ENST00000577751 DGKQP52824 942 aa17.62■□□□□ 0.41
SS18-208ENST00000577751 ACAD11Q709F0 780 aa17.62■□□□□ 0.41
SS18-208ENST00000577751 C6orf120Q7Z4R8 191 aa17.62■□□□□ 0.41
SS18-208ENST00000577751 PLCZ1Q86YW0 608 aa17.62■□□□□ 0.41
SS18-208ENST00000577751 COX18Q8N8Q8 333 aa17.62■□□□□ 0.41
SS18-208ENST00000577751 OR4A15Q8NGL6 344 aa17.62■□□□□ 0.41
SS18-208ENST00000577751 OR5AK3PQ8NH89 298 aa17.62■□□□□ 0.41
SS18-208ENST00000577751 GOT1L1Q8NHS2 421 aaPredicted RBP17.62■□□□□ 0.41
SS18-208ENST00000577751 NEIL3Q8TAT5 605 aa17.62■□□□□ 0.41
SS18-208ENST00000577751 OTUB1Q96FW1 271 aaPredicted RBP17.62■□□□□ 0.41
SS18-208ENST00000577751 CCDC120Q96HB5 630 aa17.62■□□□□ 0.41
SS18-208ENST00000577751 MARK4Q96L34 752 aa17.62■□□□□ 0.41
SS18-208ENST00000577751 CCDC115Q96NT0 180 aa17.62■□□□□ 0.41
SS18-208ENST00000577751 EBF4Q9BQW3 602 aa17.62■□□□□ 0.41
SS18-208ENST00000577751 CCDC28BQ9BUN5 200 aa17.62■□□□□ 0.41
SS18-208ENST00000577751 BTBD2Q9BX70 525 aa17.62■□□□□ 0.41
SS18-208ENST00000577751 RTN4RQ9BZR6 473 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms