RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 GABARAPL2P60520 117 aa26.45■■□□□ 1.83
CTDNEP1-210ENST00000574322 CDK5R2Q13319 367 aa26.45■■□□□ 1.83
CTDNEP1-210ENST00000574322 ERV3-1Q14264 604 aa26.45■■□□□ 1.83
CTDNEP1-210ENST00000574322 GUSBP11Q6P575 273 aa26.45■■□□□ 1.83
CTDNEP1-210ENST00000574322 BORAQ6PGQ7 559 aa26.45■■□□□ 1.83
CTDNEP1-210ENST00000574322 ZNF619Q8N2I2 560 aa26.45■■□□□ 1.83
CTDNEP1-210ENST00000574322 LINC00471Q8N535 108 aa26.45■■□□□ 1.83
CTDNEP1-210ENST00000574322 C7orf57Q8NEG2 295 aa26.45■■□□□ 1.83
CTDNEP1-210ENST00000574322 ZNF501Q96CX3 271 aaPredicted RBP26.45■■□□□ 1.83
CTDNEP1-210ENST00000574322 KLHL28Q9NXS3 571 aa26.45■■□□□ 1.83
CTDNEP1-210ENST00000574322 SLC13A4Q9UKG4 626 aa26.45■■□□□ 1.83
CTDNEP1-210ENST00000574322 ZNF443Q9Y2A4 671 aaPredicted RBP26.45■■□□□ 1.83
CTDNEP1-210ENST00000574322 LAMA1P25391 3075 aa26.45■■□□□ 1.82
CTDNEP1-210ENST00000574322 UGT2B17O75795 530 aa26.45■■□□□ 1.82
CTDNEP1-210ENST00000574322 CCDC159P0C7I6 412 aa26.45■■□□□ 1.82
CTDNEP1-210ENST00000574322 CXCR4P61073 352 aa26.45■■□□□ 1.82
CTDNEP1-210ENST00000574322 FUT7Q11130 342 aa26.45■■□□□ 1.82
CTDNEP1-210ENST00000574322 PIN1Q13526 163 aaPredicted RBP26.45■■□□□ 1.82
CTDNEP1-210ENST00000574322 HMGN2P46Q86SG4 172 aa26.45■■□□□ 1.82
CTDNEP1-210ENST00000574322 METTL27Q8N6F8 245 aaPredicted RBP26.45■■□□□ 1.82
CTDNEP1-210ENST00000574322 BLOC1S6Q9UL45 172 aa26.45■■□□□ 1.82
CTDNEP1-210ENST00000574322 MGAT4BQ9UQ53 548 aa26.45■■□□□ 1.82
CTDNEP1-210ENST00000574322 HYAL3O43820 417 aaPredicted RBP26.44■■□□□ 1.82
CTDNEP1-210ENST00000574322 KIAA0513O60268 411 aa26.44■■□□□ 1.82
CTDNEP1-210ENST00000574322 CDC123O75794 336 aaPredicted RBP26.44■■□□□ 1.82
CTDNEP1-210ENST00000574322 TGM1P22735 817 aa26.44■■□□□ 1.82
CTDNEP1-210ENST00000574322 POU6F2P78424 691 aaPredicted RBP26.44■■□□□ 1.82
CTDNEP1-210ENST00000574322 DSG2Q14126 1118 aa26.44■■□□□ 1.82
CTDNEP1-210ENST00000574322 LARS2Q15031 903 aaKnown RBP26.44■■□□□ 1.82
CTDNEP1-210ENST00000574322 SEC23BQ15437 767 aa26.44■■□□□ 1.82
CTDNEP1-210ENST00000574322 PERM1Q5SV97 790 aa26.44■■□□□ 1.82
CTDNEP1-210ENST00000574322 ZNF574Q6ZN55 896 aaPredicted RBP26.44■■□□□ 1.82
CTDNEP1-210ENST00000574322 PRR23CQ6ZRP0 262 aa26.44■■□□□ 1.82
CTDNEP1-210ENST00000574322 AQP11Q8NBQ7 271 aa26.44■■□□□ 1.82
CTDNEP1-210ENST00000574322 GPR151Q8TDV0 419 aa26.44■■□□□ 1.82
CTDNEP1-210ENST00000574322 NAT6Q93015 286 aa26.44■■□□□ 1.82
CTDNEP1-210ENST00000574322 NDC1Q9BTX1 674 aa26.44■■□□□ 1.82
CTDNEP1-210ENST00000574322 FNDC11Q9BVV2 318 aa26.44■■□□□ 1.82
CTDNEP1-210ENST00000574322 CACYBPQ9HB71 228 aaKnown RBP26.44■■□□□ 1.82
CTDNEP1-210ENST00000574322 MAN2C1Q9NTJ4 1040 aa26.44■■□□□ 1.82
CTDNEP1-210ENST00000574322 SH3PXD2BA1X283 911 aa26.43■■□□□ 1.82
CTDNEP1-210ENST00000574322 A8MU76 341 aa26.43■■□□□ 1.82
CTDNEP1-210ENST00000574322 DSCR3O14972 297 aa26.43■■□□□ 1.82
CTDNEP1-210ENST00000574322 GASTP01350 101 aa26.43■■□□□ 1.82
CTDNEP1-210ENST00000574322 IL7RP16871 459 aa26.43■■□□□ 1.82
CTDNEP1-210ENST00000574322 IL5RAQ01344 420 aa26.43■■□□□ 1.82
CTDNEP1-210ENST00000574322 FGD3Q5JSP0 725 aa26.43■■□□□ 1.82
CTDNEP1-210ENST00000574322 ARHGAP22Q7Z5H3 698 aa26.43■■□□□ 1.82
CTDNEP1-210ENST00000574322 CCDC71Q8IV32 467 aaPredicted RBP26.43■■□□□ 1.82
CTDNEP1-210ENST00000574322 SLC7A13Q8TCU3 470 aa26.43■■□□□ 1.82
CTDNEP1-210ENST00000574322 PIK3R3Q92569 461 aa26.43■■□□□ 1.82
CTDNEP1-210ENST00000574322 VSTM2LQ96N03 204 aa26.43■■□□□ 1.82
CTDNEP1-210ENST00000574322 DPYSL5Q9BPU6 564 aa26.43■■□□□ 1.82
CTDNEP1-210ENST00000574322 EDEM2Q9BV94 578 aa26.43■■□□□ 1.82
CTDNEP1-210ENST00000574322 FOLH1BQ9HBA9 442 aa26.43■■□□□ 1.82
CTDNEP1-210ENST00000574322 FGF21Q9NSA1 209 aa26.43■■□□□ 1.82
CTDNEP1-210ENST00000574322 PCDHGA6Q9Y5G7 932 aa26.43■■□□□ 1.82
CTDNEP1-210ENST00000574322 HEMK1Q9Y5R4 338 aaPredicted RBP26.43■■□□□ 1.82
CTDNEP1-210ENST00000574322 WDR87Q6ZQQ6 2873 aa26.43■■□□□ 1.82
CTDNEP1-210ENST00000574322 TTC36A6NLP5 189 aa26.42■■□□□ 1.82
CTDNEP1-210ENST00000574322 BRINP1O60477 761 aa26.42■■□□□ 1.82
CTDNEP1-210ENST00000574322 CPNE6O95741 557 aa26.42■■□□□ 1.82
CTDNEP1-210ENST00000574322 DBIP07108 87 aaKnown RBP26.42■■□□□ 1.82
CTDNEP1-210ENST00000574322 MAOAP21397 527 aa26.42■■□□□ 1.82
CTDNEP1-210ENST00000574322 GABRA3P34903 492 aa26.42■■□□□ 1.82
CTDNEP1-210ENST00000574322 GGT2P36268 569 aa26.42■■□□□ 1.82
CTDNEP1-210ENST00000574322 ESRRGP62508 458 aa26.42■■□□□ 1.82
CTDNEP1-210ENST00000574322 EEF1A1P68104 462 aaKnown RBP26.42■■□□□ 1.82
CTDNEP1-210ENST00000574322 PSG6Q00889 435 aa26.42■■□□□ 1.82
CTDNEP1-210ENST00000574322 ZNF155Q12901 538 aaPredicted RBP26.42■■□□□ 1.82
CTDNEP1-210ENST00000574322 EIPR1Q53HC9 387 aa26.42■■□□□ 1.82
CTDNEP1-210ENST00000574322 ZNF773Q6PK81 442 aa26.42■■□□□ 1.82
CTDNEP1-210ENST00000574322 CLIP4Q8N3C7 705 aa26.42■■□□□ 1.82
CTDNEP1-210ENST00000574322 OR4D9Q8NGE8 314 aa26.42■■□□□ 1.82
CTDNEP1-210ENST00000574322 DGCR6LQ9BY27 220 aa26.42■■□□□ 1.82
CTDNEP1-210ENST00000574322 ANKRD19PQ9H560 264 aa26.42■■□□□ 1.82
CTDNEP1-210ENST00000574322 FANCEQ9HB96 536 aa26.42■■□□□ 1.82
CTDNEP1-210ENST00000574322 NECTIN3Q9NQS3 549 aa26.42■■□□□ 1.82
CTDNEP1-210ENST00000574322 RXFP3Q9NSD7 469 aa26.42■■□□□ 1.82
CTDNEP1-210ENST00000574322 GPR55Q9Y2T6 319 aaPredicted RBP26.42■■□□□ 1.82
CTDNEP1-210ENST00000574322 MAU2Q9Y6X3 613 aa26.42■■□□□ 1.82
CTDNEP1-210ENST00000574322 ZFHX2Q9C0A1 2572 aaPredicted RBP26.42■■□□□ 1.82
CTDNEP1-210ENST00000574322 RALGAPA1Q6GYQ0 2036 aa26.42■■□□□ 1.82
CTDNEP1-210ENST00000574322 CPED1A4D0V7 1026 aa26.42■■□□□ 1.82
CTDNEP1-210ENST00000574322 FOXD2O60548 495 aaPredicted RBP26.42■■□□□ 1.82
CTDNEP1-210ENST00000574322 PRAMEF2O60811 474 aa26.42■■□□□ 1.82
CTDNEP1-210ENST00000574322 MAD2L1BPQ15013 274 aaPredicted RBP26.42■■□□□ 1.82
CTDNEP1-210ENST00000574322 CCNJQ5T5M9 372 aa26.42■■□□□ 1.82
CTDNEP1-210ENST00000574322 TMPRSS9Q7Z410 1059 aa26.42■■□□□ 1.82
CTDNEP1-210ENST00000574322 RBM38Q9H0Z9 239 aaKnown RBP26.42■■□□□ 1.82
CTDNEP1-210ENST00000574322 ADNPQ9H2P0 1102 aa26.42■■□□□ 1.82
CTDNEP1-210ENST00000574322 ADAMTS9Q9P2N4 1935 aa26.42■■□□□ 1.82
CTDNEP1-210ENST00000574322 A0A1W2PQM1 296 aa26.41■■□□□ 1.82
CTDNEP1-210ENST00000574322 TPST2O60704 377 aa26.41■■□□□ 1.82
CTDNEP1-210ENST00000574322 ALAS2P22557 587 aa26.41■■□□□ 1.82
CTDNEP1-210ENST00000574322 ZNHIT3Q15649 155 aaPredicted RBP26.41■■□□□ 1.82
CTDNEP1-210ENST00000574322 ZNF836Q6ZNA1 936 aa26.41■■□□□ 1.82
CTDNEP1-210ENST00000574322 QSOX2Q6ZRP7 698 aa26.41■■□□□ 1.82
CTDNEP1-210ENST00000574322 EP300Q09472 2414 aaPredicted RBP26.4■■□□□ 1.82
CTDNEP1-210ENST00000574322 IGKV3D-11A0A0A0MRZ8 115 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms