RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 PLIN3O60664 434 aa19.14■□□□□ 0.65
CHRNB1-206ENST00000574054 RSL1D1O76021 490 aaKnown RBP19.14■□□□□ 0.65
CHRNB1-206ENST00000574054 SLITRK5O94991 958 aa19.14■□□□□ 0.65
CHRNB1-206ENST00000574054 SHBGP04278 402 aa19.14■□□□□ 0.65
CHRNB1-206ENST00000574054 CD99P14209 185 aa19.14■□□□□ 0.65
CHRNB1-206ENST00000574054 ZNF708P17019 499 aa19.14■□□□□ 0.65
CHRNB1-206ENST00000574054 CHMP24386 653 aa19.14■□□□□ 0.65
CHRNB1-206ENST00000574054 RFX3P48380 749 aa19.14■□□□□ 0.65
CHRNB1-206ENST00000574054 DSCR4P56555 118 aaPredicted RBP19.14■□□□□ 0.65
CHRNB1-206ENST00000574054 CLDN18P56856 261 aa19.14■□□□□ 0.65
CHRNB1-206ENST00000574054 ZNHIT3Q15649 155 aaPredicted RBP19.14■□□□□ 0.65
CHRNB1-206ENST00000574054 DECR1Q16698 335 aa19.14■□□□□ 0.65
CHRNB1-206ENST00000574054 CCDC153Q494R4 210 aa19.14■□□□□ 0.65
CHRNB1-206ENST00000574054 CYP27C1Q4G0S4 372 aa19.14■□□□□ 0.65
CHRNB1-206ENST00000574054 RAET1LQ5VY80 246 aa19.14■□□□□ 0.65
CHRNB1-206ENST00000574054 NOXRED1Q6NXP6 359 aa19.14■□□□□ 0.65
CHRNB1-206ENST00000574054 CHMP1BQ7LBR1 199 aa19.14■□□□□ 0.65
CHRNB1-206ENST00000574054 TRIM46Q7Z4K8 759 aa19.14■□□□□ 0.65
CHRNB1-206ENST00000574054 P4HA3Q7Z4N8 544 aa19.14■□□□□ 0.65
CHRNB1-206ENST00000574054 UBQLNLQ8IYU4 475 aa19.14■□□□□ 0.65
CHRNB1-206ENST00000574054 FAM76AQ8TAV0 307 aa19.14■□□□□ 0.65
CHRNB1-206ENST00000574054 AMDHD1Q96NU7 426 aa19.14■□□□□ 0.65
CHRNB1-206ENST00000574054 UCN2Q96RP3 112 aa19.14■□□□□ 0.65
CHRNB1-206ENST00000574054 CXXC4Q9H2H0 198 aa19.14■□□□□ 0.65
CHRNB1-206ENST00000574054 C12orf65Q9H3J6 166 aaKnown RBP19.14■□□□□ 0.65
CHRNB1-206ENST00000574054 Q9N2J8 555 aa19.14■□□□□ 0.65
CHRNB1-206ENST00000574054 FLRT3Q9NZU0 649 aa19.14■□□□□ 0.65
CHRNB1-206ENST00000574054 MRPS18CQ9Y3D5 142 aaKnown RBP19.14■□□□□ 0.65
CHRNB1-206ENST00000574054 ACANP16112 2415 aa19.13■□□□□ 0.65
CHRNB1-206ENST00000574054 B4DXG7 233 aa19.13■□□□□ 0.65
CHRNB1-206ENST00000574054 UPK1AO00322 258 aa19.13■□□□□ 0.65
CHRNB1-206ENST00000574054 DIAPH2O60879 1101 aa19.13■□□□□ 0.65
CHRNB1-206ENST00000574054 SEC22BO75396 215 aa19.13■□□□□ 0.65
CHRNB1-206ENST00000574054 CPA3P15088 417 aa19.13■□□□□ 0.65
CHRNB1-206ENST00000574054 HK1P19367 917 aa19.13■□□□□ 0.65
CHRNB1-206ENST00000574054 CCT5P48643 541 aa19.13■□□□□ 0.65
CHRNB1-206ENST00000574054 DNAJB13P59910 316 aa19.13■□□□□ 0.65
CHRNB1-206ENST00000574054 CLEC6AQ6EIG7 209 aa19.13■□□□□ 0.65
CHRNB1-206ENST00000574054 IKBIPQ70UQ0 350 aa19.13■□□□□ 0.65
CHRNB1-206ENST00000574054 LRRN4CLQ8ND94 238 aa19.13■□□□□ 0.65
CHRNB1-206ENST00000574054 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.13■□□□□ 0.65
CHRNB1-206ENST00000574054 PIGMQ9H3S5 423 aa19.13■□□□□ 0.65
CHRNB1-206ENST00000574054 TAS2R7Q9NYW3 318 aa19.13■□□□□ 0.65
CHRNB1-206ENST00000574054 MED11Q9P086 117 aa19.13■□□□□ 0.65
CHRNB1-206ENST00000574054 WBP11Q9Y2W2 641 aaKnown RBP19.13■□□□□ 0.65
CHRNB1-206ENST00000574054 COPEO14579 308 aa19.12■□□□□ 0.65
CHRNB1-206ENST00000574054 FADS1O60427 444 aa19.12■□□□□ 0.65
CHRNB1-206ENST00000574054 TGM6O95932 706 aa19.12■□□□□ 0.65
CHRNB1-206ENST00000574054 UROSP10746 265 aa19.12■□□□□ 0.65
CHRNB1-206ENST00000574054 DIO3P55073 304 aa19.12■□□□□ 0.65
CHRNB1-206ENST00000574054 B3GALT5-AS1P59052 145 aa19.12■□□□□ 0.65
CHRNB1-206ENST00000574054 PPP2R2AP63151 447 aa19.12■□□□□ 0.65
CHRNB1-206ENST00000574054 GAB1Q13480 694 aa19.12■□□□□ 0.65
CHRNB1-206ENST00000574054 SH2D5Q6ZV89 423 aa19.12■□□□□ 0.65
CHRNB1-206ENST00000574054 TGIF2LYQ8IUE0 185 aa19.12■□□□□ 0.65
CHRNB1-206ENST00000574054 OR2L13Q8N349 312 aa19.12■□□□□ 0.65
CHRNB1-206ENST00000574054 OR2M3Q8NG83 312 aa19.12■□□□□ 0.65
CHRNB1-206ENST00000574054 GFM2Q969S9 779 aaKnown RBP19.12■□□□□ 0.65
CHRNB1-206ENST00000574054 ELP4Q96EB1 424 aa19.12■□□□□ 0.65
CHRNB1-206ENST00000574054 EQTNQ9NQ60 294 aa19.12■□□□□ 0.65
CHRNB1-206ENST00000574054 SDHAF3Q9NRP4 125 aa19.12■□□□□ 0.65
CHRNB1-206ENST00000574054 OXSMQ9NWU1 459 aa19.12■□□□□ 0.65
CHRNB1-206ENST00000574054 MRTO4Q9UKD2 239 aaKnown RBP19.12■□□□□ 0.65
CHRNB1-206ENST00000574054 PACSIN3Q9UKS6 424 aa19.12■□□□□ 0.65
CHRNB1-206ENST00000574054 ABCG2Q9UNQ0 655 aa19.12■□□□□ 0.65
CHRNB1-206ENST00000574054 PTGDR2Q9Y5Y4 395 aa19.12■□□□□ 0.65
CHRNB1-206ENST00000574054 A0A1W2PNV4 684 aa19.11■□□□□ 0.65
CHRNB1-206ENST00000574054 PEPDP12955 493 aa19.11■□□□□ 0.65
CHRNB1-206ENST00000574054 CRHR1P34998 444 aa19.11■□□□□ 0.65
CHRNB1-206ENST00000574054 CPOXP36551 454 aa19.11■□□□□ 0.65
CHRNB1-206ENST00000574054 CLK3P49761 638 aaKnown RBP19.11■□□□□ 0.65
CHRNB1-206ENST00000574054 HSPB3Q12988 150 aa19.11■□□□□ 0.65
CHRNB1-206ENST00000574054 POU4F3Q15319 338 aa19.11■□□□□ 0.65
CHRNB1-206ENST00000574054 BCL2A1Q16548 175 aa19.11■□□□□ 0.65
CHRNB1-206ENST00000574054 ANKRD26P1Q6NSI1 321 aa19.11■□□□□ 0.65
CHRNB1-206ENST00000574054 PAMR1Q6UXH9 720 aa19.11■□□□□ 0.65
CHRNB1-206ENST00000574054 ZNF551Q7Z340 670 aaPredicted RBP19.11■□□□□ 0.65
CHRNB1-206ENST00000574054 MED12LQ86YW9 2145 aa19.11■□□□□ 0.65
CHRNB1-206ENST00000574054 MEIOBQ8N635 442 aa19.11■□□□□ 0.65
CHRNB1-206ENST00000574054 CNEP1R1Q8N9A8 125 aa19.11■□□□□ 0.65
CHRNB1-206ENST00000574054 FADS6Q8N9I5 356 aa19.11■□□□□ 0.65
CHRNB1-206ENST00000574054 EGLN2Q96KS0 407 aa19.11■□□□□ 0.65
CHRNB1-206ENST00000574054 TMUB1Q9BVT8 246 aa19.11■□□□□ 0.65
CHRNB1-206ENST00000574054 LRTM1Q9HBL6 345 aa19.11■□□□□ 0.65
CHRNB1-206ENST00000574054 FAM120CQ9NX05 1096 aaKnown RBP19.11■□□□□ 0.65
CHRNB1-206ENST00000574054 FIS1Q9Y3D6 152 aa19.11■□□□□ 0.65
CHRNB1-206ENST00000574054 FLNAP21333 2647 aaKnown RBP19.11■□□□□ 0.65
CHRNB1-206ENST00000574054 SH3D21A4FU49 640 aa19.1■□□□□ 0.65
CHRNB1-206ENST00000574054 SLC22A20A6NK97 555 aa19.1■□□□□ 0.65
CHRNB1-206ENST00000574054 PDPK1O15530 556 aa19.1■□□□□ 0.65
CHRNB1-206ENST00000574054 HCRTR2O43614 444 aa19.1■□□□□ 0.65
CHRNB1-206ENST00000574054 SMNDC1O75940 238 aaKnown RBP eCLIP19.1■□□□□ 0.65
CHRNB1-206ENST00000574054 PSMG1O95456 288 aa19.1■□□□□ 0.65
CHRNB1-206ENST00000574054 IL33O95760 270 aa19.1■□□□□ 0.65
CHRNB1-206ENST00000574054 GABRA3P34903 492 aa19.1■□□□□ 0.65
CHRNB1-206ENST00000574054 GPC1P35052 558 aa19.1■□□□□ 0.65
CHRNB1-206ENST00000574054 EEF1A1P68104 462 aaKnown RBP19.1■□□□□ 0.65
CHRNB1-206ENST00000574054 KEAP1Q14145 624 aa19.1■□□□□ 0.65
CHRNB1-206ENST00000574054 EEF1A1P5Q5VTE0 462 aa19.1■□□□□ 0.65
CHRNB1-206ENST00000574054 LIPMQ5VYY2 423 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms