RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 DFFBO76075 338 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 ATP1B1P05026 303 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 ZNF286BP0CG31 522 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 TAC1P20366 129 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 ELAVL4P26378 380 aaKnown RBP3.3□□□□□ -1.88
UBR1-211ENST00000569971 AXLP30530 894 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 SRD5A2P31213 254 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 DCTP40126 519 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 ATXN3P54252 364 aaPredicted RBP3.3□□□□□ -1.88
UBR1-211ENST00000569971 HERV-K104P61576 105 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 YWHAGP61981 247 aaKnown RBP eCLIP3.3□□□□□ -1.88
UBR1-211ENST00000569971 BST2Q10589 180 aaKnown RBP3.3□□□□□ -1.88
UBR1-211ENST00000569971 ILF3Q12906 894 aaKnown RBP eCLIP3.3□□□□□ -1.88
UBR1-211ENST00000569971 LCP2Q13094 533 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 RIPK1Q13546 671 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 CDH18Q13634 790 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 DPYSL3Q14195 570 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 GK2Q14410 553 aaPredicted RBP3.3□□□□□ -1.88
UBR1-211ENST00000569971 FASTKD3Q14CZ7 662 aaKnown RBP3.3□□□□□ -1.88
UBR1-211ENST00000569971 PDK4Q16654 411 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 CCL15Q16663 113 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 LCN1P1Q5VSP4 162 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 OR4C11Q6IEV9 310 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 ZCCHC12Q6PEW1 402 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 C9orf139Q6ZV77 190 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 FAM183BPQ6ZVS7 135 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 MOB2Q70IA6 237 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 SLC16A9Q7RTY1 509 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 TMEM110Q86TL2 294 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 ACOT1Q86TX2 421 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 ISCA2Q86U28 154 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 PIGZQ86VD9 579 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 FBXO36Q8NEA4 188 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 OR4C15Q8NGM1 316 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 OR4C3Q8NH37 302 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 FAM172AQ8WUF8 416 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 FCAMRQ8WWV6 532 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 FAF2Q96CS3 445 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 LRRC39Q96DD0 335 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 RNF157Q96PX1 679 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 PKP2Q99959 881 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 ZNF670Q9BS34 389 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 WWTR1Q9GZV5 400 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 IQCGQ9H095 443 aaKnown RBP3.3□□□□□ -1.88
UBR1-211ENST00000569971 EGLN3Q9H6Z9 239 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 ECT2Q9H8V3 914 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 EURLQ9NYK6 297 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 SPASTQ9UBP0 616 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 C19orf25Q9UFG5 118 aaPredicted RBP3.3□□□□□ -1.88
UBR1-211ENST00000569971 HMGXB4Q9UGU5 601 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 UBQLN2Q9UHD9 624 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 CYTH4Q9UIA0 394 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 PSORS1C1Q9UIG5 152 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 TSPAN16Q9UKR8 245 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 UBQLN1Q9UMX0 589 aaKnown RBP3.3□□□□□ -1.88
UBR1-211ENST00000569971 FOXA2Q9Y261 457 aaPredicted RBP3.3□□□□□ -1.88
UBR1-211ENST00000569971 LRP12Q9Y561 859 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 HEY1Q9Y5J3 304 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 USH1CQ9Y6N9 552 aa3.3□□□□□ -1.88
UBR1-211ENST00000569971 NRCAMQ92823 1304 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 PLXNB2O15031 1838 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 TRBV2A0A0J9YWF9 115 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 MTMR11A4FU01 709 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 SLC15A5A6NIM6 579 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 KPNA7A9QM74 516 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 HACD1B0YJ81 288 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 I3L4J1 428 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 COPEO14579 308 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 TYROBPO43914 113 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 MGRN1O60291 552 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 CIDEAO60543 219 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 EDF1O60869 148 aaKnown RBP3.29□□□□□ -1.88
UBR1-211ENST00000569971 HUS1O60921 280 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 GLRA3O75311 464 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 CSDE1O75534 798 aaKnown RBP3.29□□□□□ -1.88
UBR1-211ENST00000569971 CDK2AP2O75956 126 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 ATP6V1G2O95670 118 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 SNAI1O95863 264 aaPredicted RBP3.29□□□□□ -1.88
UBR1-211ENST00000569971 CHRNGP07510 517 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 APRTP07741 180 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 YES1P07947 543 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 SNRPAP09012 282 aaKnown RBP3.29□□□□□ -1.88
UBR1-211ENST00000569971 CD48P09326 243 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 IQCF3P0C7M6 154 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 B4GALT1P15291 398 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 KCNE1P15382 129 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 NQO1P15559 274 aaKnown RBP3.29□□□□□ -1.88
UBR1-211ENST00000569971 CCNA2P20248 432 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 IL10P22301 178 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 CYP2F1P24903 491 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 GCAP28676 217 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 FOXN2P32314 431 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 RPA3P35244 121 aaPredicted RBP3.29□□□□□ -1.88
UBR1-211ENST00000569971 FDFT1P37268 417 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 ELK3P41970 407 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 MAGEA6P43360 314 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 TAF6P49848 677 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 SERPINB9P50453 376 aa3.29□□□□□ -1.88
UBR1-211ENST00000569971 CNN1P51911 297 aaKnown RBP3.29□□□□□ -1.88
UBR1-211ENST00000569971 HNRNPFP52597 415 aaKnown RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms