RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 SCO2O43819 266 aa12.53□□□□□ -0.4
GTF3C1-211ENST00000569653 TNFSF13O75888 250 aa12.53□□□□□ -0.4
GTF3C1-211ENST00000569653 RCBTB2O95199 551 aa12.53□□□□□ -0.4
GTF3C1-211ENST00000569653 IL18BPO95998 194 aa12.53□□□□□ -0.4
GTF3C1-211ENST00000569653 IGKV1D-16P01601 117 aa12.53□□□□□ -0.4
GTF3C1-211ENST00000569653 PNLIPRP2P54317 469 aa12.53□□□□□ -0.4
GTF3C1-211ENST00000569653 ZNF155Q12901 538 aaPredicted RBP12.53□□□□□ -0.4
GTF3C1-211ENST00000569653 KIAA0040Q15053 153 aa12.53□□□□□ -0.4
GTF3C1-211ENST00000569653 CLEC6AQ6EIG7 209 aa12.53□□□□□ -0.4
GTF3C1-211ENST00000569653 TRIM46Q7Z4K8 759 aa12.53□□□□□ -0.4
GTF3C1-211ENST00000569653 IFNEQ86WN2 208 aa12.53□□□□□ -0.4
GTF3C1-211ENST00000569653 OR2M3Q8NG83 312 aa12.53□□□□□ -0.4
GTF3C1-211ENST00000569653 OR2T11Q8NH01 316 aa12.53□□□□□ -0.4
GTF3C1-211ENST00000569653 INTS12Q96CB8 462 aaKnown RBP12.53□□□□□ -0.4
GTF3C1-211ENST00000569653 APOPT1Q96IL0 206 aa12.53□□□□□ -0.4
GTF3C1-211ENST00000569653 AMDHD1Q96NU7 426 aa12.53□□□□□ -0.4
GTF3C1-211ENST00000569653 GALNT8Q9NY28 637 aa12.53□□□□□ -0.4
GTF3C1-211ENST00000569653 TAS2R7Q9NYW3 318 aa12.53□□□□□ -0.4
GTF3C1-211ENST00000569653 C19orf53Q9UNZ5 99 aaPredicted RBP12.53□□□□□ -0.4
GTF3C1-211ENST00000569653 ZANQ9Y493 2812 aa12.53□□□□□ -0.4
GTF3C1-211ENST00000569653 GXYLT2A0PJZ3 443 aa12.52□□□□□ -0.41
GTF3C1-211ENST00000569653 NPIPB8E9PQR5 432 aa12.52□□□□□ -0.41
GTF3C1-211ENST00000569653 H3BQF6 201 aa12.52□□□□□ -0.41
GTF3C1-211ENST00000569653 DIAPH2O60879 1101 aa12.52□□□□□ -0.41
GTF3C1-211ENST00000569653 ABCB7O75027 752 aa12.52□□□□□ -0.41
GTF3C1-211ENST00000569653 BCAS2O75934 225 aaPredicted RBP12.52□□□□□ -0.41
GTF3C1-211ENST00000569653 EPXP11678 715 aa12.52□□□□□ -0.41
GTF3C1-211ENST00000569653 EVI2BP34910 448 aa12.52□□□□□ -0.41
GTF3C1-211ENST00000569653 OPRM1P35372 400 aa12.52□□□□□ -0.41
GTF3C1-211ENST00000569653 NCBP2P52298 156 aaKnown RBP eCLIP12.52□□□□□ -0.41
GTF3C1-211ENST00000569653 DGKQP52824 942 aa12.52□□□□□ -0.41
GTF3C1-211ENST00000569653 DNAJB13P59910 316 aa12.52□□□□□ -0.41
GTF3C1-211ENST00000569653 SLC18A2Q05940 514 aa12.52□□□□□ -0.41
GTF3C1-211ENST00000569653 GAB1Q13480 694 aa12.52□□□□□ -0.41
GTF3C1-211ENST00000569653 RCAN2Q14206 197 aa12.52□□□□□ -0.41
GTF3C1-211ENST00000569653 HEPACAMQ14CZ8 416 aa12.52□□□□□ -0.41
GTF3C1-211ENST00000569653 ZNF385BQ569K4 471 aa12.52□□□□□ -0.41
GTF3C1-211ENST00000569653 CFAP157Q5JU67 520 aa12.52□□□□□ -0.41
GTF3C1-211ENST00000569653 SPDYAQ5MJ70 313 aa12.52□□□□□ -0.41
GTF3C1-211ENST00000569653 SH2D4BQ5SQS7 431 aa12.52□□□□□ -0.41
GTF3C1-211ENST00000569653 ANKRD26P1Q6NSI1 321 aa12.52□□□□□ -0.41
GTF3C1-211ENST00000569653 APOOLQ6UXV4 268 aa12.52□□□□□ -0.41
GTF3C1-211ENST00000569653 ZNF551Q7Z340 670 aaPredicted RBP12.52□□□□□ -0.41
GTF3C1-211ENST00000569653 TRABD2AQ86V40 505 aa12.52□□□□□ -0.41
GTF3C1-211ENST00000569653 OR2L13Q8N349 312 aa12.52□□□□□ -0.41
GTF3C1-211ENST00000569653 OR5M1Q8NGP8 315 aa12.52□□□□□ -0.41
GTF3C1-211ENST00000569653 NINJ1Q92982 152 aa12.52□□□□□ -0.41
GTF3C1-211ENST00000569653 WNT2BQ93097 391 aa12.52□□□□□ -0.41
GTF3C1-211ENST00000569653 TMCO6Q96DC7 493 aa12.52□□□□□ -0.41
GTF3C1-211ENST00000569653 SFXN2Q96NB2 322 aa12.52□□□□□ -0.41
GTF3C1-211ENST00000569653 BBS4Q96RK4 519 aa12.52□□□□□ -0.41
GTF3C1-211ENST00000569653 KLHDC3Q9BQ90 382 aa12.52□□□□□ -0.41
GTF3C1-211ENST00000569653 DSN1Q9H410 356 aa12.52□□□□□ -0.41
GTF3C1-211ENST00000569653 TUBB1Q9H4B7 451 aa12.52□□□□□ -0.41
GTF3C1-211ENST00000569653 PLEKHF2Q9H8W4 249 aa12.52□□□□□ -0.41
GTF3C1-211ENST00000569653 ROS1P08922 2347 aa12.52□□□□□ -0.41
GTF3C1-211ENST00000569653 NSD1Q96L73 2696 aaPredicted RBP12.52□□□□□ -0.41
GTF3C1-211ENST00000569653 RAI1Q7Z5J4 1906 aaPredicted RBP12.51□□□□□ -0.41
GTF3C1-211ENST00000569653 A0A087WV62 115 aa12.51□□□□□ -0.41
GTF3C1-211ENST00000569653 TUBAL3A6NHL2 446 aa12.51□□□□□ -0.41
GTF3C1-211ENST00000569653 SIAH2O43255 324 aa12.51□□□□□ -0.41
GTF3C1-211ENST00000569653 CPA3P15088 417 aa12.51□□□□□ -0.41
GTF3C1-211ENST00000569653 DPP4P27487 766 aa12.51□□□□□ -0.41
GTF3C1-211ENST00000569653 IL12BP29460 328 aa12.51□□□□□ -0.41
GTF3C1-211ENST00000569653 CCKARP32238 428 aa12.51□□□□□ -0.41
GTF3C1-211ENST00000569653 SUCLG1P53597 346 aaKnown RBP12.51□□□□□ -0.41
GTF3C1-211ENST00000569653 SORDQ00796 357 aa12.51□□□□□ -0.41
GTF3C1-211ENST00000569653 STX5Q13190 355 aa12.51□□□□□ -0.41
GTF3C1-211ENST00000569653 EFR3AQ14156 821 aa12.51□□□□□ -0.41
GTF3C1-211ENST00000569653 POU4F3Q15319 338 aa12.51□□□□□ -0.41
GTF3C1-211ENST00000569653 LIPMQ5VYY2 423 aa12.51□□□□□ -0.41
GTF3C1-211ENST00000569653 NOXRED1Q6NXP6 359 aa12.51□□□□□ -0.41
GTF3C1-211ENST00000569653 PAMR1Q6UXH9 720 aa12.51□□□□□ -0.41
GTF3C1-211ENST00000569653 Q6ZSR9 355 aa12.51□□□□□ -0.41
GTF3C1-211ENST00000569653 LUZP2Q86TE4 346 aa12.51□□□□□ -0.41
GTF3C1-211ENST00000569653 TGIF2LYQ8IUE0 185 aa12.51□□□□□ -0.41
GTF3C1-211ENST00000569653 KRTAP1-3Q8IUG1 177 aa12.51□□□□□ -0.41
GTF3C1-211ENST00000569653 SAMD14Q8IZD0 417 aaPredicted RBP12.51□□□□□ -0.41
GTF3C1-211ENST00000569653 HOXB13Q92826 284 aaPredicted RBP12.51□□□□□ -0.41
GTF3C1-211ENST00000569653 CIDECQ96AQ7 238 aaPredicted RBP12.51□□□□□ -0.41
GTF3C1-211ENST00000569653 ELP4Q96EB1 424 aa12.51□□□□□ -0.41
GTF3C1-211ENST00000569653 RMND5BQ96G75 393 aaPredicted RBP12.51□□□□□ -0.41
GTF3C1-211ENST00000569653 NPAS1Q99742 590 aa12.51□□□□□ -0.41
GTF3C1-211ENST00000569653 SFXN3Q9BWM7 321 aa12.51□□□□□ -0.41
GTF3C1-211ENST00000569653 RBM24Q9BX46 236 aaKnown RBP12.51□□□□□ -0.41
GTF3C1-211ENST00000569653 DLL4Q9NR61 685 aa12.51□□□□□ -0.41
GTF3C1-211ENST00000569653 GIMAP4Q9NUV9 329 aa12.51□□□□□ -0.41
GTF3C1-211ENST00000569653 OXSMQ9NWU1 459 aa12.51□□□□□ -0.41
GTF3C1-211ENST00000569653 MED11Q9P086 117 aa12.51□□□□□ -0.41
GTF3C1-211ENST00000569653 FOXD3Q9UJU5 478 aaPredicted RBP12.51□□□□□ -0.41
GTF3C1-211ENST00000569653 DKKL1Q9UK85 242 aa12.51□□□□□ -0.41
GTF3C1-211ENST00000569653 MRPS18CQ9Y3D5 142 aaKnown RBP12.51□□□□□ -0.41
GTF3C1-211ENST00000569653 A0A1W2PNV4 684 aa12.5□□□□□ -0.41
GTF3C1-211ENST00000569653 SHISA8B8ZZ34 492 aa12.5□□□□□ -0.41
GTF3C1-211ENST00000569653 CRCPO75575 148 aa12.5□□□□□ -0.41
GTF3C1-211ENST00000569653 RSL1D1O76021 490 aaKnown RBP12.5□□□□□ -0.41
GTF3C1-211ENST00000569653 ATE1O95260 518 aa12.5□□□□□ -0.41
GTF3C1-211ENST00000569653 HRGP04196 525 aa12.5□□□□□ -0.41
GTF3C1-211ENST00000569653 CHMP24386 653 aa12.5□□□□□ -0.41
GTF3C1-211ENST00000569653 MPIP34949 423 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms