RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, human

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMG1-213	ENST00000567737	KCTD19	Q17RG1	926 aa	Predicted RBP	12.22	□□□□□ -0.45
SMG1-213	ENST00000567737	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	12.22	□□□□□ -0.45
SMG1-213	ENST00000567737	GABRG1	Q8N1C3	465 aa		12.22	□□□□□ -0.45
SMG1-213	ENST00000567737	OR4K14	Q8NGD5	310 aa		12.22	□□□□□ -0.45
SMG1-213	ENST00000567737	OR52B6	Q8NGF0	335 aa		12.22	□□□□□ -0.45
SMG1-213	ENST00000567737	SLC35A4	Q96G79	324 aa		12.22	□□□□□ -0.45
SMG1-213	ENST00000567737	ADO	Q96SZ5	270 aa		12.22	□□□□□ -0.45
SMG1-213	ENST00000567737	BRINP2	Q9C0B6	783 aa		12.22	□□□□□ -0.45
SMG1-213	ENST00000567737	PAQR5	Q9NXK6	330 aa	Predicted RBP	12.22	□□□□□ -0.45
SMG1-213	ENST00000567737	STOML1	Q9UBI4	398 aa		12.22	□□□□□ -0.45
SMG1-213	ENST00000567737	CORO1C	Q9ULV4	474 aa	Predicted RBP	12.22	□□□□□ -0.45
SMG1-213	ENST00000567737	ASB4	Q9Y574	426 aa		12.22	□□□□□ -0.45
SMG1-213	ENST00000567737		B4DXG7	233 aa		12.21	□□□□□ -0.45
SMG1-213	ENST00000567737		E7EQL1	145 aa		12.21	□□□□□ -0.45
SMG1-213	ENST00000567737	T	O15178	435 aa		12.21	□□□□□ -0.45
SMG1-213	ENST00000567737	TAPBP	O15533	448 aa		12.21	□□□□□ -0.45
SMG1-213	ENST00000567737	TMPRSS11D	O60235	418 aa		12.21	□□□□□ -0.45
SMG1-213	ENST00000567737	STK16	O75716	305 aa		12.21	□□□□□ -0.45
SMG1-213	ENST00000567737	LY6H	O94772	140 aa		12.21	□□□□□ -0.45
SMG1-213	ENST00000567737	S1PR1	P21453	382 aa		12.21	□□□□□ -0.45
SMG1-213	ENST00000567737	IL12B	P29460	328 aa		12.21	□□□□□ -0.45
SMG1-213	ENST00000567737	AGTR1	P30556	359 aa		12.21	□□□□□ -0.45
SMG1-213	ENST00000567737	KRT20	P35900	424 aa		12.21	□□□□□ -0.45
SMG1-213	ENST00000567737	PPIC	P45877	212 aa		12.21	□□□□□ -0.45
SMG1-213	ENST00000567737	KCNJ1	P48048	391 aa		12.21	□□□□□ -0.45
SMG1-213	ENST00000567737	HSPA7	P48741	367 aa		12.21	□□□□□ -0.45
SMG1-213	ENST00000567737	XK	P51811	444 aa		12.21	□□□□□ -0.45
SMG1-213	ENST00000567737	DDX39B	Q13838	428 aa	Known RBP	12.21	□□□□□ -0.45
SMG1-213	ENST00000567737	PPA1	Q15181	289 aa		12.21	□□□□□ -0.45
SMG1-213	ENST00000567737	TGFBI	Q15582	683 aa		12.21	□□□□□ -0.45
SMG1-213	ENST00000567737	TSN	Q15631	228 aa	Known RBP	12.21	□□□□□ -0.45
SMG1-213	ENST00000567737	TRIP13	Q15645	432 aa	Predicted RBP	12.21	□□□□□ -0.45
SMG1-213	ENST00000567737	TBCC	Q15814	346 aa		12.21	□□□□□ -0.45
SMG1-213	ENST00000567737	FBXO48	Q5FWF7	155 aa		12.21	□□□□□ -0.45
SMG1-213	ENST00000567737	MRM1	Q6IN84	353 aa	Known RBP	12.21	□□□□□ -0.45
SMG1-213	ENST00000567737	TREML4	Q6UXN2	200 aa		12.21	□□□□□ -0.45
SMG1-213	ENST00000567737	LAS2	Q8IYD9	372 aa		12.21	□□□□□ -0.45
SMG1-213	ENST00000567737	FADS6	Q8N9I5	356 aa		12.21	□□□□□ -0.45
SMG1-213	ENST00000567737	ZNF418	Q8TF45	676 aa	Predicted RBP	12.21	□□□□□ -0.45
SMG1-213	ENST00000567737	ESAM	Q96AP7	390 aa		12.21	□□□□□ -0.45
SMG1-213	ENST00000567737	NXNL1	Q96CM4	212 aa		12.21	□□□□□ -0.45
SMG1-213	ENST00000567737	LRRC1	Q9BTT6	524 aa		12.21	□□□□□ -0.45
SMG1-213	ENST00000567737	RBM4	Q9BWF3	364 aa	Known RBP	12.21	□□□□□ -0.45
SMG1-213	ENST00000567737	DDX47	Q9H0S4	455 aa	Known RBP	12.21	□□□□□ -0.45
SMG1-213	ENST00000567737	PTGES2	Q9H7Z7	377 aa		12.21	□□□□□ -0.45
SMG1-213	ENST00000567737	ZBTB26	Q9HCK0	441 aa		12.21	□□□□□ -0.45
SMG1-213	ENST00000567737	SMYD2	Q9NRG4	433 aa		12.21	□□□□□ -0.45
SMG1-213	ENST00000567737	PRODH2	Q9UF12	536 aa		12.21	□□□□□ -0.45
SMG1-213	ENST00000567737	PLLP	Q9Y342	182 aa		12.21	□□□□□ -0.45
SMG1-213	ENST00000567737	FKBP7	Q9Y680	259 aa		12.21	□□□□□ -0.45
SMG1-213	ENST00000567737	EPN1	Q9Y6I3	576 aa	Predicted RBP	12.21	□□□□□ -0.45
SMG1-213	ENST00000567737	PMF1-BGLAP	U3KQ54	211 aa		12.21	□□□□□ -0.45
SMG1-213	ENST00000567737	TRRAP	Q9Y4A5	3859 aa		12.2	□□□□□ -0.46
SMG1-213	ENST00000567737		A0A0A6YYD5	115 aa		12.2	□□□□□ -0.46
SMG1-213	ENST00000567737	PGRMC2	O15173	223 aa		12.2	□□□□□ -0.46
SMG1-213	ENST00000567737	EED	O75530	441 aa	Known RBP	12.2	□□□□□ -0.46
SMG1-213	ENST00000567737	ADA	P00813	363 aa		12.2	□□□□□ -0.46
SMG1-213	ENST00000567737	ZNF23	P17027	643 aa		12.2	□□□□□ -0.46
SMG1-213	ENST00000567737	GGT5	P36269	586 aa		12.2	□□□□□ -0.46
SMG1-213	ENST00000567737	ARFIP1	P53367	373 aa		12.2	□□□□□ -0.46
SMG1-213	ENST00000567737	GAS1	P54826	345 aa		12.2	□□□□□ -0.46
SMG1-213	ENST00000567737	CHRNB3	Q05901	458 aa		12.2	□□□□□ -0.46
SMG1-213	ENST00000567737	SCGB2A2	Q13296	93 aa		12.2	□□□□□ -0.46
SMG1-213	ENST00000567737	ITGAD	Q13349	1161 aa		12.2	□□□□□ -0.46
SMG1-213	ENST00000567737	CRYM	Q14894	314 aa		12.2	□□□□□ -0.46
SMG1-213	ENST00000567737	EXOSC7	Q15024	291 aa	Known RBP	12.2	□□□□□ -0.46
SMG1-213	ENST00000567737	STK11	Q15831	433 aa		12.2	□□□□□ -0.46
SMG1-213	ENST00000567737	CARTPT	Q16568	116 aa		12.2	□□□□□ -0.46
SMG1-213	ENST00000567737	AWAT1	Q58HT5	328 aa		12.2	□□□□□ -0.46
SMG1-213	ENST00000567737	GTF2IRD2B	Q6EKJ0	949 aa		12.2	□□□□□ -0.46
SMG1-213	ENST00000567737	MFSD12	Q6NUT3	480 aa		12.2	□□□□□ -0.46
SMG1-213	ENST00000567737	FAM111B	Q6SJ93	734 aa		12.2	□□□□□ -0.46
SMG1-213	ENST00000567737	SHISA2	Q6UWI4	295 aa		12.2	□□□□□ -0.46
SMG1-213	ENST00000567737	RINL	Q6ZS11	566 aa		12.2	□□□□□ -0.46
SMG1-213	ENST00000567737	GALNT7	Q86SF2	657 aa		12.2	□□□□□ -0.46
SMG1-213	ENST00000567737	GTF2IRD2	Q86UP8	949 aa		12.2	□□□□□ -0.46
SMG1-213	ENST00000567737	CNTN4	Q8IWV2	1026 aa		12.2	□□□□□ -0.46
SMG1-213	ENST00000567737	LINC00528	Q8N1L1	170 aa		12.2	□□□□□ -0.46
SMG1-213	ENST00000567737	AGGF1	Q8N302	714 aa	eCLIP	12.2	□□□□□ -0.46
SMG1-213	ENST00000567737	MCU	Q8NE86	351 aa		12.2	□□□□□ -0.46
SMG1-213	ENST00000567737	OR2M3	Q8NG83	312 aa		12.2	□□□□□ -0.46
SMG1-213	ENST00000567737	OR7G3	Q8NG95	312 aa		12.2	□□□□□ -0.46
SMG1-213	ENST00000567737	OR10D3	Q8NH80	312 aa		12.2	□□□□□ -0.46
SMG1-213	ENST00000567737	MUCL1	Q96DR8	90 aa		12.2	□□□□□ -0.46
SMG1-213	ENST00000567737	BTBD9	Q96Q07	612 aa		12.2	□□□□□ -0.46
SMG1-213	ENST00000567737	HBEGF	Q99075	208 aa		12.2	□□□□□ -0.46
SMG1-213	ENST00000567737	SOX7	Q9BT81	388 aa		12.2	□□□□□ -0.46
SMG1-213	ENST00000567737	METTL17	Q9H7H0	456 aa	Predicted RBP	12.2	□□□□□ -0.46
SMG1-213	ENST00000567737	MED11	Q9P086	117 aa		12.2	□□□□□ -0.46
SMG1-213	ENST00000567737	ARMCX1	Q9P291	453 aa		12.2	□□□□□ -0.46
SMG1-213	ENST00000567737	ASIC3	Q9UHC3	531 aa		12.2	□□□□□ -0.46
SMG1-213	ENST00000567737	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	12.2	□□□□□ -0.46
SMG1-213	ENST00000567737	C17orf51	A8MQB3	221 aa		12.19	□□□□□ -0.46
SMG1-213	ENST00000567737	SCO2	O43819	266 aa		12.19	□□□□□ -0.46
SMG1-213	ENST00000567737	CCNT2	O60583	730 aa	Known RBP	12.19	□□□□□ -0.46
SMG1-213	ENST00000567737	CPM	P14384	443 aa		12.19	□□□□□ -0.46
SMG1-213	ENST00000567737	POR	P16435	677 aa	Predicted RBP	12.19	□□□□□ -0.46
SMG1-213	ENST00000567737	PGAM1	P18669	254 aa		12.19	□□□□□ -0.46
SMG1-213	ENST00000567737	PCMT1	P22061	227 aa		12.19	□□□□□ -0.46
SMG1-213	ENST00000567737	RELB	Q01201	579 aa		12.19	□□□□□ -0.46

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