RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 L3HYPDHQ96EM0 354 aa8.72□□□□□ -1.01
CAPN3-216ENST00000567071 NSUN5Q96P11 429 aaKnown RBP8.72□□□□□ -1.01
CAPN3-216ENST00000567071 GNRHR2Q96P88 292 aa8.72□□□□□ -1.01
CAPN3-216ENST00000567071 BTBD9Q96Q07 612 aa8.72□□□□□ -1.01
CAPN3-216ENST00000567071 PKP2Q99959 881 aa8.72□□□□□ -1.01
CAPN3-216ENST00000567071 SHCBP1LQ9BZQ2 653 aa8.72□□□□□ -1.01
CAPN3-216ENST00000567071 UBQLN3Q9H347 655 aa8.72□□□□□ -1.01
CAPN3-216ENST00000567071 PROK2Q9HC23 129 aa8.72□□□□□ -1.01
CAPN3-216ENST00000567071 SLCO1B3Q9NPD5 702 aa8.72□□□□□ -1.01
CAPN3-216ENST00000567071 TMEFF2Q9UIK5 374 aaPredicted RBP8.72□□□□□ -1.01
CAPN3-216ENST00000567071 B3GALT5Q9Y2C3 310 aa8.72□□□□□ -1.01
CAPN3-216ENST00000567071 SNX8Q9Y5X2 465 aa8.72□□□□□ -1.01
CAPN3-216ENST00000567071 CHCHD2Q9Y6H1 151 aaPredicted RBP8.72□□□□□ -1.01
CAPN3-216ENST00000567071 PRR14LQ5THK1 2151 aa8.72□□□□□ -1.01
CAPN3-216ENST00000567071 CAPN14A8MX76 684 aa8.71□□□□□ -1.02
CAPN3-216ENST00000567071 TMEM114B3SHH9 223 aa8.71□□□□□ -1.02
CAPN3-216ENST00000567071 PLOD2O00469 737 aa8.71□□□□□ -1.02
CAPN3-216ENST00000567071 EMC8O43402 210 aa8.71□□□□□ -1.02
CAPN3-216ENST00000567071 LCMT2O60294 686 aaKnown RBP8.71□□□□□ -1.02
CAPN3-216ENST00000567071 H2AFYO75367 372 aaKnown RBP8.71□□□□□ -1.02
CAPN3-216ENST00000567071 HSPA4LO95757 839 aa8.71□□□□□ -1.02
CAPN3-216ENST00000567071 VIMP08670 466 aaKnown RBP8.71□□□□□ -1.02
CAPN3-216ENST00000567071 IMPDH1P20839 514 aa8.71□□□□□ -1.02
CAPN3-216ENST00000567071 GRK2P25098 689 aa8.71□□□□□ -1.02
CAPN3-216ENST00000567071 SLC1A6P48664 564 aa8.71□□□□□ -1.02
CAPN3-216ENST00000567071 HNMTP50135 292 aa8.71□□□□□ -1.02
CAPN3-216ENST00000567071 CDH13P55290 713 aa8.71□□□□□ -1.02
CAPN3-216ENST00000567071 RPP38P78345 283 aaKnown RBP8.71□□□□□ -1.02
CAPN3-216ENST00000567071 LGALS3BPQ08380 585 aa8.71□□□□□ -1.02
CAPN3-216ENST00000567071 FOXL1Q12952 345 aa8.71□□□□□ -1.02
CAPN3-216ENST00000567071 RCN2Q14257 317 aa8.71□□□□□ -1.02
CAPN3-216ENST00000567071 PGGHGQ32M88 737 aa8.71□□□□□ -1.02
CAPN3-216ENST00000567071 CDKL4Q5MAI5 379 aa8.71□□□□□ -1.02
CAPN3-216ENST00000567071 ATG16L1Q676U5 607 aa8.71□□□□□ -1.02
CAPN3-216ENST00000567071 FRMD7Q6ZUT3 714 aa8.71□□□□□ -1.02
CAPN3-216ENST00000567071 LRRC70Q7Z2Q7 622 aa8.71□□□□□ -1.02
CAPN3-216ENST00000567071 GOLGA7Q7Z5G4 137 aa8.71□□□□□ -1.02
CAPN3-216ENST00000567071 YRDCQ86U90 279 aaKnown RBP8.71□□□□□ -1.02
CAPN3-216ENST00000567071 DTX2Q86UW9 622 aa8.71□□□□□ -1.02
CAPN3-216ENST00000567071 TEX9Q8N6V9 391 aa8.71□□□□□ -1.02
CAPN3-216ENST00000567071 ZNF610Q8N9Z0 462 aa8.71□□□□□ -1.02
CAPN3-216ENST00000567071 FAM83FQ8NEG4 500 aaPredicted RBP8.71□□□□□ -1.02
CAPN3-216ENST00000567071 LILRB1Q8NHL6 650 aaPredicted RBP8.71□□□□□ -1.02
CAPN3-216ENST00000567071 NUBPLQ8TB37 319 aa8.71□□□□□ -1.02
CAPN3-216ENST00000567071 AGR3Q8TD06 166 aa8.71□□□□□ -1.02
CAPN3-216ENST00000567071 SLC2A12Q8TD20 617 aa8.71□□□□□ -1.02
CAPN3-216ENST00000567071 ZNF483Q8TF39 744 aaPredicted RBP8.71□□□□□ -1.02
CAPN3-216ENST00000567071 C3orf49Q96BT1 292 aa8.71□□□□□ -1.02
CAPN3-216ENST00000567071 RILPQ96NA2 401 aa8.71□□□□□ -1.02
CAPN3-216ENST00000567071 PIMREGQ9BSJ6 248 aa8.71□□□□□ -1.02
CAPN3-216ENST00000567071 CACNG6Q9BXT2 260 aa8.71□□□□□ -1.02
CAPN3-216ENST00000567071 CD244Q9BZW8 370 aa8.71□□□□□ -1.02
CAPN3-216ENST00000567071 C20orf27Q9GZN8 174 aa8.71□□□□□ -1.02
CAPN3-216ENST00000567071 GSTO2Q9H4Y5 243 aa8.71□□□□□ -1.02
CAPN3-216ENST00000567071 RABEP2Q9H5N1 569 aa8.71□□□□□ -1.02
CAPN3-216ENST00000567071 CCDC134Q9H6E4 229 aa8.71□□□□□ -1.02
CAPN3-216ENST00000567071 MED29Q9NX70 200 aa8.71□□□□□ -1.02
CAPN3-216ENST00000567071 OPTCQ9UBM4 332 aa8.71□□□□□ -1.02
CAPN3-216ENST00000567071 PCTPQ9UKL6 214 aa8.71□□□□□ -1.02
CAPN3-216ENST00000567071 CNOT11Q9UKZ1 510 aaKnown RBP8.71□□□□□ -1.02
CAPN3-216ENST00000567071 DLGAP4Q9Y2H0 992 aa8.71□□□□□ -1.02
CAPN3-216ENST00000567071 ANGPTL3Q9Y5C1 460 aa8.71□□□□□ -1.02
CAPN3-216ENST00000567071 SLC22A20A6NK97 555 aa8.7□□□□□ -1.02
CAPN3-216ENST00000567071 C17orf105B2RV13 164 aa8.7□□□□□ -1.02
CAPN3-216ENST00000567071 K7EPI3 171 aa8.7□□□□□ -1.02
CAPN3-216ENST00000567071 PPP6CO00743 305 aa8.7□□□□□ -1.02
CAPN3-216ENST00000567071 OR1F1O43749 312 aa8.7□□□□□ -1.02
CAPN3-216ENST00000567071 DYRK3O43781 588 aa8.7□□□□□ -1.02
CAPN3-216ENST00000567071 NPHS1O60500 1241 aa8.7□□□□□ -1.02
CAPN3-216ENST00000567071 STK16O75716 305 aa8.7□□□□□ -1.02
CAPN3-216ENST00000567071 FBXO45P0C2W1 286 aa8.7□□□□□ -1.02
CAPN3-216ENST00000567071 ARL1P40616 181 aaPredicted RBP8.7□□□□□ -1.02
CAPN3-216ENST00000567071 KIR2DL2P43627 348 aaPredicted RBP8.7□□□□□ -1.02
CAPN3-216ENST00000567071 SEC24CP53992 1094 aa8.7□□□□□ -1.02
CAPN3-216ENST00000567071 RAB8AP61006 207 aa8.7□□□□□ -1.02
CAPN3-216ENST00000567071 ABCE1P61221 599 aaKnown RBP8.7□□□□□ -1.02
CAPN3-216ENST00000567071 CBX1P83916 185 aa8.7□□□□□ -1.02
CAPN3-216ENST00000567071 CLCQ05315 142 aa8.7□□□□□ -1.02
CAPN3-216ENST00000567071 STX4Q12846 297 aa8.7□□□□□ -1.02
CAPN3-216ENST00000567071 GTF2H2Q13888 395 aa8.7□□□□□ -1.02
CAPN3-216ENST00000567071 ARL13AQ5H913 290 aaPredicted RBP8.7□□□□□ -1.02
CAPN3-216ENST00000567071 GTF2H2CQ6P1K8 395 aa8.7□□□□□ -1.02
CAPN3-216ENST00000567071 THOC6Q86W42 341 aaKnown RBP8.7□□□□□ -1.02
CAPN3-216ENST00000567071 ZNF595Q8IYB9 648 aa8.7□□□□□ -1.02
CAPN3-216ENST00000567071 LRRC34Q8IZ02 419 aa8.7□□□□□ -1.02
CAPN3-216ENST00000567071 CA13Q8N1Q1 262 aa8.7□□□□□ -1.02
CAPN3-216ENST00000567071 OR6Y1Q8NGX8 325 aa8.7□□□□□ -1.02
CAPN3-216ENST00000567071 OR14L1PQ8NHC6 308 aa8.7□□□□□ -1.02
CAPN3-216ENST00000567071 TRPC4APQ8TEL6 797 aa8.7□□□□□ -1.02
CAPN3-216ENST00000567071 DTNBP1Q96EV8 351 aa8.7□□□□□ -1.02
CAPN3-216ENST00000567071 C1QTNF3Q9BXJ4 246 aa8.7□□□□□ -1.02
CAPN3-216ENST00000567071 ACTR6Q9GZN1 396 aa8.7□□□□□ -1.02
CAPN3-216ENST00000567071 FAM107BQ9H098 131 aa8.7□□□□□ -1.02
CAPN3-216ENST00000567071 METTL17Q9H7H0 456 aaPredicted RBP8.7□□□□□ -1.02
CAPN3-216ENST00000567071 MID1IP1Q9NPA3 183 aa8.7□□□□□ -1.02
CAPN3-216ENST00000567071 FGFR1OP2Q9NVK5 253 aa8.7□□□□□ -1.02
CAPN3-216ENST00000567071 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.7□□□□□ -1.02
CAPN3-216ENST00000567071 MARCOQ9UEW3 520 aaPredicted RBP8.7□□□□□ -1.02
CAPN3-216ENST00000567071 PCDHB10Q9UN67 800 aa8.7□□□□□ -1.02
CAPN3-216ENST00000567071 SH2B3Q9UQQ2 575 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms