RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 STX11O75558 287 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 GAGE7O76087 117 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 CST1P01037 141 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 IVLP07476 585 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 LINC00271P0C7V0 271 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 GAGE12FP0CL80 117 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 GAGE12GP0CL81 117 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 GAGE12IP0CL82 117 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 PPIAL4FP0DN26 164 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 HLA-DOBP13765 273 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 ATP1B2P14415 290 aaPredicted RBP2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 ZNF23P17027 643 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 SRMP19623 302 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 U2AF2P26368 475 aaKnown RBP eCLIP2.95□□□□□ -1.948e-8■□□□□ 11.2
HERPUD1-211ENST00000566550 SLC1A4P43007 532 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 NAMPTP43490 491 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 BACE1P56817 501 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 TPM4P67936 248 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 IRX3P78415 501 aaPredicted RBP2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 OC90Q02509 493 aaPredicted RBP2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 ZP4Q12836 540 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 GAGE1Q13065 139 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 GAGE4Q13068 117 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 DRP2Q13474 957 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 ANGPT1Q15389 498 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 DUSP5Q16690 384 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 Q4G0T1 1027 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 NKAIN1Q4KMZ8 207 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 BEX5Q5H9J7 111 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 C6orf226Q5I0X4 101 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 SLX4IPQ5VYV7 408 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 TWF2Q6IBS0 349 aaKnown RBP2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 TRNP1Q6NT89 227 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 DEGS2Q6QHC5 323 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 VITQ6UXI7 678 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 LANCL3Q6ZV70 420 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 FCRLAQ7L513 359 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 LINC00523Q86TU6 105 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 SATL1Q86VE3 508 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 COMTD1Q86VU5 262 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 TPRA1Q86W33 373 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 C17orf64Q86WR6 236 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 KMT5CQ86Y97 462 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 TBC1D10CQ8IV04 446 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 PLD3Q8IV08 490 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 GTPBP8Q8N3Z3 284 aaPredicted RBP2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 FGFRL1Q8N441 504 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 CLDN19Q8N6F1 224 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 ARFGAP1Q8N6T3 406 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 FAM98AQ8NCA5 519 aaKnown RBP2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 CHDHQ8NE62 594 aaPredicted RBP2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 OR4K14Q8NGD5 310 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 OR5M9Q8NGP3 310 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 OR1L6Q8NGR2 347 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 CD99L2Q8TCZ2 262 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 ANP32BQ92688 251 aaKnown RBP2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 MYLPFQ96A32 169 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 TM4SF19Q96DZ7 209 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 SCMH1Q96GD3 660 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 FMO2Q99518 471 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 IL12RB2Q99665 862 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 DCTN5Q9BTE1 182 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 FBXO44Q9H4M3 255 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 NARFLQ9H6Q4 476 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 ALG9Q9H6U8 611 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 DCTPP1Q9H773 170 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 C8orf33Q9H7E9 229 aaPredicted RBP2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 GPN2Q9H9Y4 310 aaPredicted RBP2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 CCNB1IP1Q9NPC3 277 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 PXMP2Q9NR77 195 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 TMEM30AQ9NV96 361 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 OCIAD1Q9NX40 245 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 PEF1Q9UBV8 284 aaKnown RBP2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 FBXL4Q9UKA2 621 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 CSDC2Q9Y534 153 aaKnown RBP2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 PPIAL4AQ9Y536 164 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 GMEB1Q9Y692 573 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 RNF215Q9Y6U7 377 aa2.95□□□□□ -1.94
HERPUD1-211ENST00000566550 PTPRKQ15262 1439 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 A0A087WZ39 114 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 CD8B2A6NJW9 211 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 G3V4G9 280 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 TRAFD1O14545 582 aaPredicted RBP2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 TNFRSF13BO14836 293 aaPredicted RBP2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 SIGLEC5O15389 551 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 EFNA2O43921 213 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 SRPX2O60687 465 aaPredicted RBP2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 BCAR3O75815 825 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 DFFBO76075 338 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 DIRAS1O95057 198 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 YEATS4O95619 227 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 CA1P00915 261 aaPredicted RBP2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 NR3C1P04150 777 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 FCER2P06734 321 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 CRYGCP07315 174 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 ERCC1P07992 297 aaPredicted RBP2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 UMPSP11172 480 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 CDH1P12830 882 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 SLC7A2P52569 658 aa2.94□□□□□ -1.94
HERPUD1-211ENST00000566550 DCDC1P59894 354 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms