RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 PHGDHO43175 533 aaKnown RBP8.09□□□□□ -1.11
VPS9D1-205ENST00000565452 ZIC3O60481 467 aa8.09□□□□□ -1.11
VPS9D1-205ENST00000565452 VENTXO95231 258 aa8.09□□□□□ -1.11
VPS9D1-205ENST00000565452 GPR75O95800 540 aa8.09□□□□□ -1.11
VPS9D1-205ENST00000565452 PLGP00747 810 aaPredicted RBP8.09□□□□□ -1.11
VPS9D1-205ENST00000565452 SHBGP04278 402 aa8.09□□□□□ -1.11
VPS9D1-205ENST00000565452 F7P08709 466 aaPredicted RBP8.09□□□□□ -1.11
VPS9D1-205ENST00000565452 FCGR2AP12318 317 aa8.09□□□□□ -1.11
VPS9D1-205ENST00000565452 BMP4P12644 408 aa8.09□□□□□ -1.11
VPS9D1-205ENST00000565452 PSMB1P20618 241 aaKnown RBP8.09□□□□□ -1.11
VPS9D1-205ENST00000565452 ATP5A1P25705 553 aaKnown RBP8.09□□□□□ -1.11
VPS9D1-205ENST00000565452 ABCD3P28288 659 aa8.09□□□□□ -1.11
VPS9D1-205ENST00000565452 ADH6P28332 368 aa8.09□□□□□ -1.11
VPS9D1-205ENST00000565452 GGT5P36269 586 aa8.09□□□□□ -1.11
VPS9D1-205ENST00000565452 RPS3AP61247 264 aaKnown RBP8.09□□□□□ -1.11
VPS9D1-205ENST00000565452 IRX1P78414 480 aaPredicted RBP8.09□□□□□ -1.11
VPS9D1-205ENST00000565452 SGCBQ16585 318 aa8.09□□□□□ -1.11
VPS9D1-205ENST00000565452 CTU2Q2VPK5 515 aaKnown RBP8.09□□□□□ -1.11
VPS9D1-205ENST00000565452 SULT1C3Q6IMI6 304 aa8.09□□□□□ -1.11
VPS9D1-205ENST00000565452 SEZ6L2Q6UXD5 910 aa8.09□□□□□ -1.11
VPS9D1-205ENST00000565452 SLCO4C1Q6ZQN7 724 aa8.09□□□□□ -1.11
VPS9D1-205ENST00000565452 HDXQ7Z353 690 aa8.09□□□□□ -1.11
VPS9D1-205ENST00000565452 CMC1Q7Z7K0 106 aa8.09□□□□□ -1.11
VPS9D1-205ENST00000565452 EXOC3L1Q86VI1 746 aa8.09□□□□□ -1.11
VPS9D1-205ENST00000565452 PRR22Q8IZ63 422 aa8.09□□□□□ -1.11
VPS9D1-205ENST00000565452 LRRC17Q8N6Y2 441 aa8.09□□□□□ -1.11
VPS9D1-205ENST00000565452 ZNF525Q8N782 197 aa8.09□□□□□ -1.11
VPS9D1-205ENST00000565452 OR6K3Q8NGY3 331 aa8.09□□□□□ -1.11
VPS9D1-205ENST00000565452 ANKRD49Q8WVL7 239 aa8.09□□□□□ -1.11
VPS9D1-205ENST00000565452 NXNL1Q96CM4 212 aa8.09□□□□□ -1.11
VPS9D1-205ENST00000565452 MRPL57Q9BQC6 102 aaKnown RBP8.09□□□□□ -1.11
VPS9D1-205ENST00000565452 OSBPL11Q9BXB4 747 aa8.09□□□□□ -1.11
VPS9D1-205ENST00000565452 PINK1Q9BXM7 581 aa8.09□□□□□ -1.11
VPS9D1-205ENST00000565452 CACNG6Q9BXT2 260 aa8.09□□□□□ -1.11
VPS9D1-205ENST00000565452 PRRG4Q9BZD6 226 aa8.09□□□□□ -1.11
VPS9D1-205ENST00000565452 TRIM2Q9C040 744 aa8.09□□□□□ -1.11
VPS9D1-205ENST00000565452 BHLHE41Q9C0J9 482 aaPredicted RBP8.09□□□□□ -1.11
VPS9D1-205ENST00000565452 STMN4Q9H169 189 aaPredicted RBP8.09□□□□□ -1.11
VPS9D1-205ENST00000565452 VPS11Q9H270 941 aa8.09□□□□□ -1.11
VPS9D1-205ENST00000565452 CNOT10Q9H9A5 744 aaKnown RBP8.09□□□□□ -1.11
VPS9D1-205ENST00000565452 PRM3Q9NNZ6 103 aa8.09□□□□□ -1.11
VPS9D1-205ENST00000565452 TBK1Q9UHD2 729 aa8.09□□□□□ -1.11
VPS9D1-205ENST00000565452 GRID1Q9ULK0 1009 aa8.09□□□□□ -1.11
VPS9D1-205ENST00000565452 MED12LQ86YW9 2145 aa8.09□□□□□ -1.11
VPS9D1-205ENST00000565452 LINC01387J3KSC0 135 aa8.08□□□□□ -1.12
VPS9D1-205ENST00000565452 RGS16O15492 202 aaPredicted RBP8.08□□□□□ -1.12
VPS9D1-205ENST00000565452 KERAO60938 352 aa8.08□□□□□ -1.12
VPS9D1-205ENST00000565452 PPM1BO75688 479 aa8.08□□□□□ -1.12
VPS9D1-205ENST00000565452 AIFM1O95831 613 aa8.08□□□□□ -1.12
VPS9D1-205ENST00000565452 S100BP04271 92 aaPredicted RBP8.08□□□□□ -1.12
VPS9D1-205ENST00000565452 MYZAPP0CAP1 466 aa8.08□□□□□ -1.12
VPS9D1-205ENST00000565452 APEHP13798 732 aaKnown RBP8.08□□□□□ -1.12
VPS9D1-205ENST00000565452 H2AFXP16104 143 aaPredicted RBP8.08□□□□□ -1.12
VPS9D1-205ENST00000565452 HIST1H1TP22492 207 aaPredicted RBP8.08□□□□□ -1.12
VPS9D1-205ENST00000565452 CRHR1P34998 444 aa8.08□□□□□ -1.12
VPS9D1-205ENST00000565452 NAA20P61599 178 aa8.08□□□□□ -1.12
VPS9D1-205ENST00000565452 SLC18A2Q05940 514 aa8.08□□□□□ -1.12
VPS9D1-205ENST00000565452 SLAMF1Q13291 335 aa8.08□□□□□ -1.12
VPS9D1-205ENST00000565452 DOC2AQ14183 400 aa8.08□□□□□ -1.12
VPS9D1-205ENST00000565452 GGTLC2Q14390 218 aa8.08□□□□□ -1.12
VPS9D1-205ENST00000565452 SLBPQ14493 270 aaKnown RBP eCLIP8.08□□□□□ -1.12
VPS9D1-205ENST00000565452 ZNF460Q14592 562 aa8.08□□□□□ -1.12
VPS9D1-205ENST00000565452 PON3Q15166 354 aa8.08□□□□□ -1.12
VPS9D1-205ENST00000565452 GUSBP1Q15486 140 aa8.08□□□□□ -1.12
VPS9D1-205ENST00000565452 TGFBIQ15582 683 aa8.08□□□□□ -1.12
VPS9D1-205ENST00000565452 TSNQ15631 228 aaKnown RBP8.08□□□□□ -1.12
VPS9D1-205ENST00000565452 HIST2H2ACQ16777 129 aaPredicted RBP8.08□□□□□ -1.12
VPS9D1-205ENST00000565452 PPP1R3AQ16821 1122 aa8.08□□□□□ -1.12
VPS9D1-205ENST00000565452 CCDC153Q494R4 210 aa8.08□□□□□ -1.12
VPS9D1-205ENST00000565452 TMEM35AQ53FP2 167 aa8.08□□□□□ -1.12
VPS9D1-205ENST00000565452 HIST2H2AA3Q6FI13 130 aa8.08□□□□□ -1.12
VPS9D1-205ENST00000565452 ZNF793Q6ZN11 406 aa8.08□□□□□ -1.12
VPS9D1-205ENST00000565452 FRA10AC1Q70Z53 315 aa8.08□□□□□ -1.12
VPS9D1-205ENST00000565452 HOMEZQ8IX15 550 aa8.08□□□□□ -1.12
VPS9D1-205ENST00000565452 CENPLQ8N0S6 344 aaPredicted RBP8.08□□□□□ -1.12
VPS9D1-205ENST00000565452 PLD6Q8N2A8 252 aaKnown RBP8.08□□□□□ -1.12
VPS9D1-205ENST00000565452 C17orf47Q8NEP4 570 aa8.08□□□□□ -1.12
VPS9D1-205ENST00000565452 FNDC9Q8TBE3 224 aa8.08□□□□□ -1.12
VPS9D1-205ENST00000565452 MZB1Q8WU39 189 aa8.08□□□□□ -1.12
VPS9D1-205ENST00000565452 FAM216AQ8WUB2 273 aa8.08□□□□□ -1.12
VPS9D1-205ENST00000565452 GFM2Q969S9 779 aaKnown RBP8.08□□□□□ -1.12
VPS9D1-205ENST00000565452 ADIPOR1Q96A54 375 aa8.08□□□□□ -1.12
VPS9D1-205ENST00000565452 S100PBPQ96BU1 408 aa8.08□□□□□ -1.12
VPS9D1-205ENST00000565452 RADILQ96JH8 1075 aa8.08□□□□□ -1.12
VPS9D1-205ENST00000565452 GPR78Q96P69 363 aa8.08□□□□□ -1.12
VPS9D1-205ENST00000565452 NODALQ96S42 347 aa8.08□□□□□ -1.12
VPS9D1-205ENST00000565452 OR10A5Q9H207 317 aa8.08□□□□□ -1.12
VPS9D1-205ENST00000565452 VIPAS39Q9H9C1 493 aa8.08□□□□□ -1.12
VPS9D1-205ENST00000565452 GALNT9Q9HCQ5 603 aa8.08□□□□□ -1.12
VPS9D1-205ENST00000565452 CBLN4Q9NTU7 201 aa8.08□□□□□ -1.12
VPS9D1-205ENST00000565452 ARMCX1Q9P291 453 aa8.08□□□□□ -1.12
VPS9D1-205ENST00000565452 TMEFF2Q9UIK5 374 aaPredicted RBP8.08□□□□□ -1.12
VPS9D1-205ENST00000565452 DKKL1Q9UK85 242 aa8.08□□□□□ -1.12
VPS9D1-205ENST00000565452 TNPO3Q9Y5L0 923 aaKnown RBP8.08□□□□□ -1.12
VPS9D1-205ENST00000565452 ACTL7BQ9Y614 415 aa8.08□□□□□ -1.12
VPS9D1-205ENST00000565452 GOLGA6L10A6NI86 522 aa8.07□□□□□ -1.12
VPS9D1-205ENST00000565452 GLRA3O75311 464 aa8.07□□□□□ -1.12
VPS9D1-205ENST00000565452 TBX6O95947 436 aaPredicted RBP8.07□□□□□ -1.12
VPS9D1-205ENST00000565452 CLPSP04118 112 aa8.07□□□□□ -1.12
VPS9D1-205ENST00000565452 SLC35E2P0CK97 266 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms