RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 GXYLT2A0PJZ3 443 aa18.17■□□□□ 0.5
CLN6-205ENST00000564846 TRHRP34981 398 aaPredicted RBP18.17■□□□□ 0.5
CLN6-205ENST00000564846 ELAVL1Q15717 326 aaKnown RBP18.17■□□□□ 0.5
CLN6-205ENST00000564846 LIN52Q52LA3 116 aa18.17■□□□□ 0.5
CLN6-205ENST00000564846 PWWP2BQ6NUJ5 590 aa18.17■□□□□ 0.5
CLN6-205ENST00000564846 FIGNL1Q6PIW4 674 aa18.17■□□□□ 0.5
CLN6-205ENST00000564846 THAP5Q7Z6K1 395 aa18.17■□□□□ 0.5
CLN6-205ENST00000564846 TMEM151BQ8IW70 566 aa18.17■□□□□ 0.5
CLN6-205ENST00000564846 C16orf52Q8NHV5 167 aa18.17■□□□□ 0.5
CLN6-205ENST00000564846 CLIP3Q96DZ5 547 aa18.17■□□□□ 0.5
CLN6-205ENST00000564846 SENP5Q96HI0 755 aaPredicted RBP18.17■□□□□ 0.5
CLN6-205ENST00000564846 GRIP2Q9C0E4 1043 aa18.17■□□□□ 0.5
CLN6-205ENST00000564846 RIBC2Q9H4K1 309 aa18.17■□□□□ 0.5
CLN6-205ENST00000564846 ZNF556Q9HAH1 456 aa18.17■□□□□ 0.5
CLN6-205ENST00000564846 Q9N2J8 555 aa18.17■□□□□ 0.5
CLN6-205ENST00000564846 POFUT2Q9Y2G5 429 aa18.17■□□□□ 0.5
CLN6-205ENST00000564846 CHST2Q9Y4C5 530 aa18.17■□□□□ 0.5
CLN6-205ENST00000564846 IGLV3-12A0A075B6K2 115 aa18.16■□□□□ 0.5
CLN6-205ENST00000564846 A0A1W2PRQ8 180 aa18.16■□□□□ 0.5
CLN6-205ENST00000564846 OXSR1O95747 527 aaPredicted RBP18.16■□□□□ 0.5
CLN6-205ENST00000564846 POLR2IP36954 125 aaKnown RBP18.16■□□□□ 0.5
CLN6-205ENST00000564846 TPD52P55327 224 aaPredicted RBP18.16■□□□□ 0.5
CLN6-205ENST00000564846 ZFP36L1Q07352 338 aaKnown RBP18.16■□□□□ 0.5
CLN6-205ENST00000564846 PIN1Q13526 163 aaPredicted RBP18.16■□□□□ 0.5
CLN6-205ENST00000564846 DGCR6Q14129 220 aa18.16■□□□□ 0.5
CLN6-205ENST00000564846 KEAP1Q14145 624 aa18.16■□□□□ 0.5
CLN6-205ENST00000564846 IL11RAQ14626 422 aa18.16■□□□□ 0.5
CLN6-205ENST00000564846 NSDHLQ15738 373 aa18.16■□□□□ 0.5
CLN6-205ENST00000564846 NPTX1Q15818 432 aa18.16■□□□□ 0.5
CLN6-205ENST00000564846 NKAIN1Q4KMZ8 207 aa18.16■□□□□ 0.5
CLN6-205ENST00000564846 FGD3Q5JSP0 725 aa18.16■□□□□ 0.5
CLN6-205ENST00000564846 DCST1Q5T197 706 aa18.16■□□□□ 0.5
CLN6-205ENST00000564846 LAIR1Q6GTX8 287 aa18.16■□□□□ 0.5
CLN6-205ENST00000564846 COX15Q7KZN9 410 aa18.16■□□□□ 0.5
CLN6-205ENST00000564846 ZNF786Q8N393 782 aa18.16■□□□□ 0.5
CLN6-205ENST00000564846 RHBDD1Q8TEB9 315 aa18.16■□□□□ 0.5
CLN6-205ENST00000564846 FNDC11Q9BVV2 318 aa18.16■□□□□ 0.5
CLN6-205ENST00000564846 GABARAPL3Q9BY60 117 aa18.16■□□□□ 0.5
CLN6-205ENST00000564846 PAPOLBQ9NRJ5 636 aaKnown RBP18.16■□□□□ 0.5
CLN6-205ENST00000564846 SLC22A11Q9NSA0 550 aa18.16■□□□□ 0.5
CLN6-205ENST00000564846 MKL2Q9ULH7 1088 aa18.16■□□□□ 0.5
CLN6-205ENST00000564846 CLCA3PQ9Y6N3 262 aa18.16■□□□□ 0.5
CLN6-205ENST00000564846 TRBV4-1A0A0J9YWV2 114 aa18.15■□□□□ 0.5
CLN6-205ENST00000564846 SEC24DO94855 1032 aaPredicted RBP18.15■□□□□ 0.5
CLN6-205ENST00000564846 TIAF1O95411 115 aa18.15■□□□□ 0.5
CLN6-205ENST00000564846 CLPSP04118 112 aa18.15■□□□□ 0.5
CLN6-205ENST00000564846 FGF5P12034 268 aa18.15■□□□□ 0.5
CLN6-205ENST00000564846 NID1P14543 1247 aa18.15■□□□□ 0.5
CLN6-205ENST00000564846 ELAVL4P26378 380 aaKnown RBP18.15■□□□□ 0.5
CLN6-205ENST00000564846 IFNA8P32881 189 aa18.15■□□□□ 0.5
CLN6-205ENST00000564846 NUBP1P53384 320 aa18.15■□□□□ 0.5
CLN6-205ENST00000564846 EEF1A1P68104 462 aaKnown RBP18.15■□□□□ 0.5
CLN6-205ENST00000564846 ZNF691Q5VV52 312 aa18.15■□□□□ 0.5
CLN6-205ENST00000564846 ISLR2Q6UXK2 745 aa18.15■□□□□ 0.5
CLN6-205ENST00000564846 ZNF836Q6ZNA1 936 aa18.15■□□□□ 0.5
CLN6-205ENST00000564846 CLIP4Q8N3C7 705 aa18.15■□□□□ 0.5
CLN6-205ENST00000564846 SLC38A9Q8NBW4 561 aa18.15■□□□□ 0.5
CLN6-205ENST00000564846 AGBL5Q8NDL9 886 aa18.15■□□□□ 0.5
CLN6-205ENST00000564846 PLPP5Q8NEB5 264 aa18.15■□□□□ 0.5
CLN6-205ENST00000564846 G6PC3Q9BUM1 346 aa18.15■□□□□ 0.5
CLN6-205ENST00000564846 YTHDF1Q9BYJ9 559 aaKnown RBP18.15■□□□□ 0.5
CLN6-205ENST00000564846 VN1R1Q9GZP7 353 aa18.15■□□□□ 0.5
CLN6-205ENST00000564846 ING2Q9H160 280 aa18.15■□□□□ 0.5
CLN6-205ENST00000564846 ARMC7Q9H6L4 198 aa18.15■□□□□ 0.5
CLN6-205ENST00000564846 RLIMQ9NVW2 624 aa18.15■□□□□ 0.5
CLN6-205ENST00000564846 FBXO34Q9NWN3 711 aa18.15■□□□□ 0.5
CLN6-205ENST00000564846 CTSFQ9UBX1 484 aa18.15■□□□□ 0.5
CLN6-205ENST00000564846 FTSJ1Q9UET6 329 aa18.15■□□□□ 0.5
CLN6-205ENST00000564846 CFL2Q9Y281 166 aa18.15■□□□□ 0.5
CLN6-205ENST00000564846 DTX4Q9Y2E6 619 aa18.15■□□□□ 0.5
CLN6-205ENST00000564846 GPR55Q9Y2T6 319 aaPredicted RBP18.15■□□□□ 0.5
CLN6-205ENST00000564846 CCDC88CQ9P219 2028 aa18.15■□□□□ 0.5
CLN6-205ENST00000564846 FAAHO00519 579 aa18.14■□□□□ 0.5
CLN6-205ENST00000564846 BCKDKO14874 412 aa18.14■□□□□ 0.5
CLN6-205ENST00000564846 ONECUT2O95948 504 aa18.14■□□□□ 0.5
CLN6-205ENST00000564846 RGS8P57771 180 aaPredicted RBP18.14■□□□□ 0.5
CLN6-205ENST00000564846 DCDP81605 110 aaKnown RBP18.14■□□□□ 0.5
CLN6-205ENST00000564846 OCA2Q04671 838 aa18.14■□□□□ 0.5
CLN6-205ENST00000564846 NPRL3Q12980 569 aa18.14■□□□□ 0.5
CLN6-205ENST00000564846 KCTD21Q4G0X4 260 aa18.14■□□□□ 0.5
CLN6-205ENST00000564846 FLYWCH1Q4VC44 716 aa18.14■□□□□ 0.5
CLN6-205ENST00000564846 RNF220Q5VTB9 566 aa18.14■□□□□ 0.5
CLN6-205ENST00000564846 ZNF770Q6IQ21 691 aaPredicted RBP18.14■□□□□ 0.5
CLN6-205ENST00000564846 OR9Q2Q8NGE9 314 aa18.14■□□□□ 0.5
CLN6-205ENST00000564846 DAZLQ92904 295 aaKnown RBP18.14■□□□□ 0.5
CLN6-205ENST00000564846 ART5Q96L15 291 aa18.14■□□□□ 0.5
CLN6-205ENST00000564846 SLC46A1Q96NT5 459 aa18.14■□□□□ 0.5
CLN6-205ENST00000564846 EVA1AQ9H8M9 152 aa18.14■□□□□ 0.5
CLN6-205ENST00000564846 OCIAD1Q9NX40 245 aa18.14■□□□□ 0.5
CLN6-205ENST00000564846 MYO15AQ9UKN7 3530 aa18.14■□□□□ 0.49
CLN6-205ENST00000564846 A6NHS1 94 aa18.14■□□□□ 0.49
CLN6-205ENST00000564846 EFCAB7A8K855 629 aa18.14■□□□□ 0.49
CLN6-205ENST00000564846 AGRPO00253 132 aa18.14■□□□□ 0.49
CLN6-205ENST00000564846 SMIM18P0DKX4 95 aa18.14■□□□□ 0.49
CLN6-205ENST00000564846 CT45A8P0DMV1 189 aa18.14■□□□□ 0.49
CLN6-205ENST00000564846 CT45A9P0DMV2 189 aa18.14■□□□□ 0.49
CLN6-205ENST00000564846 FUT4P22083 530 aa18.14■□□□□ 0.49
CLN6-205ENST00000564846 CBLP22681 906 aa18.14■□□□□ 0.49
CLN6-205ENST00000564846 RYKP34925 604 aa18.14■□□□□ 0.49
CLN6-205ENST00000564846 SLC37A1P57057 533 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms