RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 ZNF780AO75290 641 aaPredicted RBP3.17□□□□□ -1.9
CHD9-213ENST00000564845 RCBTB2O95199 551 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 IFNA6P05013 189 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 CPMP14384 443 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 S100A3P33764 101 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 STARP49675 285 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 STC1P52823 247 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 NFATC2Q13469 925 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 RSPO4Q2I0M5 234 aaPredicted RBP3.17□□□□□ -1.9
CHD9-213ENST00000564845 XKR6Q5GH73 641 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 ALG10BQ5I7T1 473 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 SAMD13Q5VXD3 122 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 NCEH1Q6PIU2 408 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 B3GNT6Q6ZMB0 384 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 ZNF621Q6ZSS3 439 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 RASGRP3Q8IV61 690 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 CCDC103Q8IW40 242 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 DENND6BQ8NEG7 585 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 NETO1Q8TDF5 533 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 KCTD14Q9BQ13 255 aaPredicted RBP3.17□□□□□ -1.9
CHD9-213ENST00000564845 CFAP46Q8IYW2 2715 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 H7BY64 318 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 IL3P08700 152 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 RAD52P43351 418 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 CXCR4P61073 352 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 HNRNPKP61978 463 aaKnown RBP eCLIP3.17□□□□□ -1.9
CHD9-213ENST00000564845 GXYLT1Q4G148 440 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 PLXDC2Q6UX71 529 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 KIAA1324Q6UXG2 1013 aaKnown RBP3.17□□□□□ -1.9
CHD9-213ENST00000564845 PARS2Q7L3T8 475 aaKnown RBP3.17□□□□□ -1.9
CHD9-213ENST00000564845 SKA3Q8IX90 412 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 PGAM4Q8N0Y7 254 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 RNASE11Q8TAA1 199 aaKnown RBP3.17□□□□□ -1.9
CHD9-213ENST00000564845 PIH1D2Q8WWB5 315 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 NCSTNQ92542 709 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 PRAP1Q96NZ9 151 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 RANBP9Q96S59 729 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 Q9N2J8 555 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 POFUT2Q9Y2G5 429 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 LOC102725191A0A1B0GVB3 256 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 A0A1B0GVI7 797 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 FAM172BPA6NC97 362 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 AGAP14A8MT82 685 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 B8ZZF3 427 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 PDPK1O15530 556 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 XPNPEP2O43895 674 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 LAMP2P13473 410 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 ZNF43P17038 809 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 SPAM1P38567 509 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 PITPNBP48739 271 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 ZNF84P51523 738 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 NEDD8Q15843 81 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 SYT6Q5T7P8 510 aaPredicted RBP3.17□□□□□ -1.9
CHD9-213ENST00000564845 AMZ2Q86W34 360 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 OR8J3Q8NGG0 315 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 STK35Q8TDR2 534 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 ALG14Q96F25 216 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 SH3YL1Q96HL8 342 aaPredicted RBP3.17□□□□□ -1.9
CHD9-213ENST00000564845 AP1S3Q96PC3 154 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 KCNC2Q96PR1 638 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 KCNK12Q9HB15 430 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 KLHL1Q9NR64 748 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 NCDNQ9UBB6 729 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 REV1Q9UBZ9 1251 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 PPT2Q9UMR5 302 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 PDE10AQ9Y233 779 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 LRRC42Q9Y546 428 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 PCDHB14Q9Y5E9 798 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 TBC1D3DA0A087WVF3 549 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 TBC1D3IA0A087WXS9 549 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 TBC1D3EA0A087X179 549 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 TBC1D3KA0A087X1G2 549 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 CDC14CA4D256 554 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 TBC1D3FA6NER0 549 aaPredicted RBP3.17□□□□□ -1.9
CHD9-213ENST00000564845 TBC1D3LB9A6J9 549 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 MRASO14807 208 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 TBC1D3HP0C7X1 549 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 PLGLB1Q02325 96 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 AQP6Q13520 282 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 INSL4Q14641 139 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 GPRC6AQ5T6X5 926 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 KIAA0895LQ68EN5 471 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 TBC1D3GQ6DHY5 549 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 TBC1D3CQ6IPX1 549 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 ZNF704Q6ZNC4 412 aaPredicted RBP3.17□□□□□ -1.9
CHD9-213ENST00000564845 SHFQ7M4L6 423 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 TBC1D3Q8IZP1 549 aaPredicted RBP3.17□□□□□ -1.9
CHD9-213ENST00000564845 OR1J2Q8NGS2 313 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 BBS10Q8TAM1 723 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 CNIH3Q8TBE1 160 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 SPPL3Q8TCT6 385 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 SNRNP27Q8WVK2 155 aaKnown RBP3.17□□□□□ -1.9
CHD9-213ENST00000564845 CMTM7Q96FZ5 175 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 MOB1AQ9H8S9 216 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 SEC14L3Q9UDX4 400 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 SERTAD3Q9UJW9 196 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 ASF1AQ9Y294 204 aa3.17□□□□□ -1.9
CHD9-213ENST00000564845 MRPS7Q9Y2R9 242 aaKnown RBP3.17□□□□□ -1.9
CHD9-213ENST00000564845 SLC6A5Q9Y345 797 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms